Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025592 Daucus carota HOM05D003193 ORTHO05D029199 2.4e-33 144.8 69 100.0
Atru.chr2.1127 Acer truncatum HOM05D003193 ORTHO05D004924 5.1e-23 110.5 54 96.3
CSS0037513 Camellia sinensis var. sinensis HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
CSS0043374 Camellia sinensis var. sinensis HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
CAN.G131.15 Capsicum annuum HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Cpa.g.sc51.21 Carica papaya HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
CiPaw.07G075200 Carya illinoinensis HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
AUR62000638 Chenopodium quinoa HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
AUR62006993 Chenopodium quinoa HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Ciclev10018428m.g Citrus clementina HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Cc09_g03080 Coffea canephora HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
MELO3C008660.2 Cucumis melo HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
CsaV3_2G010070 Cucumis sativus L. HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
DCAR_029994 Daucus carota HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Dinv06951 Davidia involucrata HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Duzib177G0185 Durio zibethinus HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Glyma.03G252300 Glycine max HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Glyma.19G249900 Glycine max HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Gohir.D11G253200 Gossypium hirsutum HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Gorai.007G272000 Gossypium raimondii HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Hma1.2p1_0123F.1_g058190 Hydrangea macrophylla HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Lj2C47T5 Lonicera japonica HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Lj1g0024446 Lotus japonicus HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
MD12G1252000 Malus domestica HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Nitab4.5_0002063g0040 Nicotiana tabacum HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Oeu055042.1 Olea europaea HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Peaxi162Scf00071g00269 Petunia axillaris HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Phvul.006G107000 Phaseolus vulgaris HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Prupe.6G353600 Prunus persica HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
PGR004G2196 Punica granatum HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
QL03p032698 Quercus lobata HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Sed0015322 Sechium edule HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Hund07170 Selenicereus undatus HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Sc09g0001810 Simmondsia chinensis HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Solyc04g050510.3 Solanum lycopersicum HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
Sopen04g021290 Solanum pennellii HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
SGA_v2.0_scaffold62G21472 Striga asiatica HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
TAR365G0326 Trochodendron aralioides HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
TAR636G2059 Trochodendron aralioides HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
VMungo0540G1922 Vigna mungo HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
GSVIVG01026340001 Vitis vinifera HOM05D003193 ORTHO05D004924 6.6e-23 110.2 54 96.3
ATR0787G173 Amborella trichopoda HOM05D003193 ORTHO05D004924 8.6e-23 109.8 54 96.3
CANSAT54G2238 Cannabis sativa HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
ClCG11G010250 Citrullus lanatus HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
COL.COLO4_37867 Corchorus olitorius HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
Haze_04475 Corylus avellana HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
Eucgr.H04206 Eucalyptus grandis HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
FAN05G0534 Fragaria x ananassa HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
FAN05G3617 Fragaria x ananassa HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
MBI07_g08903_MAGBIO Magnolia biondii HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
Os03g0721200 Oryza sativa ssp. japonica HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
Thecc.05G265800 Theobroma cacao HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
Zm00001eb055550 Zea mays HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
Zm00001eb208180 Zea mays HOM05D003193 ORTHO05D004924 1.5e-22 109.0 54 94.4
Actinidia03822 Actinidia chinensis HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 92.6
Aa31LG2G2030 Aethionema arabicum HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 92.6
arahy.Tifrunner.gnm1.ann1.9XF1RW Arachis hypogaea HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 94.4
arahy.Tifrunner.gnm1.ann1.ZPSV32 Arachis hypogaea HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 94.4
EL10Ac4g09775 Beta vulgaris HOM05D003193 ORTHO05D004924 1.9e-22 108.6 53 96.2
Ca_09471_v3 Cicer arietinum L. HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 94.4
Gohir.A11G243500 Gossypium hirsutum HOM05D003193 ORTHO05D004924 1.9e-22 108.6 53 96.2
Medtr7g116425 Medicago truncatula HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 94.4
Psat0s4268g0040 Pisum sativum HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 94.4
Rhsim05G0170000 Rhododendron simsii HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 92.6
RcHm_v2.0_Chr3g0449041 Rosa chinensis HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 94.4
SalBow1G5750 Salvia bowleyana HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 94.4
SEGI_35396 Sequoiadendron giganteum HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 94.4
TPR.G4710 Trifolium pratense HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 94.4
TWI60G0900 Tripterygium wilfordii HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 94.4
vmacro19974 Vaccinium macrocarpon HOM05D003193 ORTHO05D004924 1.9e-22 108.6 54 92.6
CDE09G0882 Ceratophyllum demersum HOM05D003193 ORTHO05D004924 2.5e-22 108.2 54 92.6
PSO832G2952 Papaver somniferum HOM05D003193 ORTHO05D004924 2.5e-22 108.2 54 92.6
ECA232G1705 Erigeron canadensis HOM05D003193 ORTHO05D004924 3.3e-22 107.8 54 92.6
HanXRQChr05g0145131 Helianthus annuus HOM05D003193 ORTHO05D004924 3.3e-22 107.8 54 92.6
Lsat_1_v5_gn_9_45981 Lactuca sativa HOM05D003193 ORTHO05D004924 3.3e-22 107.8 54 92.6
Manes.09G146200 Manihot esculenta HOM05D003193 ORTHO05D004924 3.3e-22 107.8 54 94.4
Nn1g03055 Nelumbo nucifera HOM05D003193 ORTHO05D004924 3.3e-22 107.8 54 94.4
PSO764G0333 Papaver somniferum HOM05D003193 ORTHO05D004924 3.3e-22 107.8 54 92.6
Potri.019G024200 Populus trichocarpa HOM05D003193 ORTHO05D004924 3.3e-22 107.8 54 94.4
Aqoxy5G00090 Aquilegia oxysepala HOM05D003193 ORTHO05D004924 4.3e-22 107.5 54 92.6
Migut.F02049 Erythranthe guttata HOM05D003193 ORTHO05D004924 4.3e-22 107.5 54 92.6
FvH4_6g01410 Fragaria vesca HOM05D003193 ORTHO05D004924 4.3e-22 107.5 54 92.6
FAN14G4461 Fragaria x ananassa HOM05D003193 ORTHO05D004924 4.3e-22 107.5 54 92.6
FAN14G5315 Fragaria x ananassa HOM05D003193 ORTHO05D004924 4.3e-22 107.5 54 92.6
Lalb_Chr04g0261971 Lupinus albus HOM05D003193 ORTHO05D004924 4.3e-22 107.5 54 94.4
THA.LOC104821587 Tarenaya hassleriana HOM05D003193 ORTHO05D004924 4.3e-22 107.5 54 94.4
Carub.0012s0016 Capsella rubella HOM05D003193 ORTHO05D004924 5.6e-22 107.1 54 90.7
Psat2g117480 Pisum sativum HOM05D003193 ORTHO05D029199 5.6e-22 107.1 53 94.3
FAN02G3021 Fragaria x ananassa HOM05D003193 ORTHO05D004924 9.6e-22 106.3 54 90.7
Psat2g117360 Pisum sativum HOM05D003193 ORTHO05D004924 9.6e-22 106.3 54 92.6
HPP92_001295 Vanilla planifolia HOM05D003193 ORTHO05D004924 9.6e-22 106.3 54 92.6
AL2G19160 Arabidopsis lyrata HOM05D003193 ORTHO05D004924 1.2e-21 105.9 54 88.9
unitig_37.g12282 Utricularia gibba HOM05D003193 ORTHO05D004924 1.2e-21 105.9 54 92.6
BcaB05g23590 Brassica carinata HOM05D003193 ORTHO05D004924 2.8e-21 104.8 54 88.9
BcaC03g16020 Brassica carinata HOM05D003193 ORTHO05D004924 2.8e-21 104.8 54 88.9
A02p23930 Brassica napus HOM05D003193 ORTHO05D004924 2.8e-21 104.8 54 88.9
C02p37720 Brassica napus HOM05D003193 ORTHO05D004924 2.8e-21 104.8 54 88.9
BolC2t09791H Brassica oleracea HOM05D003193 ORTHO05D004924 2.8e-21 104.8 54 88.9
BraA02t07385Z Brassica rapa HOM05D003193 ORTHO05D004924 2.8e-21 104.8 54 88.9
Thhalv10022486m.g Eutrema salsugineum HOM05D003193 ORTHO05D004924 2.8e-21 104.8 54 88.9
SpUn0003_0310 Schrenkiella parvula HOM05D003193 ORTHO05D004924 2.8e-21 104.8 54 88.9
Hma1.2p1_0123F.1_g058180 Hydrangea macrophylla HOM05D003193 ORTHO05D004924 6.2e-21 103.6 60 86.7
MD04G1233800 Malus domestica HOM05D003193 ORTHO05D004924 1.1e-20 102.8 55 92.7
Mapoly0135s0025 Marchantia polymorpha HOM05D003193 ORTHO05D004924 4.0e-20 100.9 54 85.2
AT1G64790 Arabidopsis thaliana HOM05D003193 ORTHO05D004924 5.2e-20 100.5 60 81.7
SHI15636 Sapria himalayana HOM05D003193 ORTHO05D004924 6.9e-20 100.1 54 85.2
CBR_g28040 Chara braunii HOM05D003193 ORTHO05D004924 1.2e-19 99.4 53 84.9
SMO356G0295 Selaginella moellendorffii HOM05D003193 ORTHO05D004924 1.2e-19 99.4 54 83.3
Pp3c22_8910 Physcomitrium patens HOM05D003193 ORTHO05D004924 2.6e-19 98.2 54 79.6
Cre01.g015600 Chlamydomonas reinhardtii HOM05D003193 ORTHO05D004924 9.3e-17 89.7 54 75.9
Sabra19G0034100 Salix brachista HOM05D003193 ORTHO05D004924 4.6e-16 87.4 44 93.2
MCO11G232 Micromonas commoda HOM05D003193 ORTHO05D004924 3.0e-15 84.7 52 71.2
DCAR_015795 Daucus carota HOM05D003193 ORTHO05D029199 1.5e-14 82.4 44 86.4
PRCOL_00002743 Prasinoderma coloniale HOM05D003193 ORTHO05D004924 2.4e-12 75.1 52 67.3
SalBow1G0653 Salvia bowleyana HOM05D003193 ORTHO05D004924 9.9e-11 69.7 33 93.9
TWI60G1601 Tripterygium wilfordii HOM05D003193 ORTHO05D029199 6.0e-08 60.5 33 78.8


User provided reference genes

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