Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025575 Daucus carota HOM05D003659 ORTHO05D004298 3.2e-124 448.4 217 100.0
Lsat_1_v5_gn_1_32141 Lactuca sativa HOM05D003659 ORTHO05D004298 2.7e-102 375.6 217 82.0
HanXRQChr04g0098481 Helianthus annuus HOM05D003659 ORTHO05D004298 2.7e-99 365.5 217 80.2
Cc04_g05030 Coffea canephora HOM05D003659 ORTHO05D004298 5.2e-98 361.3 216 77.8
Oeu060128.1 Olea europaea HOM05D003659 ORTHO05D004298 5.2e-98 361.3 217 77.9
DCAR_021366 Daucus carota HOM05D003659 ORTHO05D004298 8.8e-98 360.5 220 78.2
ECA247G2368 Erigeron canadensis HOM05D003659 ORTHO05D004298 1.2e-97 360.1 219 78.1
MSTRG.9405 Avicennia marina HOM05D003659 ORTHO05D004298 3.4e-97 358.6 216 78.7
Dinv23291 Davidia involucrata HOM05D003659 ORTHO05D004298 4.4e-97 358.2 219 78.1
Lj5A80T55 Lonicera japonica HOM05D003659 ORTHO05D004298 4.4e-97 358.2 217 78.8
Peaxi162Scf00332g00435 Petunia axillaris HOM05D003659 ORTHO05D004298 1.7e-96 356.3 217 78.3
Cfa013072 Carpinus fangiana HOM05D003659 ORTHO05D004298 3.7e-96 355.1 218 76.1
Nn2g12325 Nelumbo nucifera HOM05D003659 ORTHO05D004298 3.7e-96 355.1 217 77.9
Nn8g39829 Nelumbo nucifera HOM05D003659 ORTHO05D004298 3.7e-96 355.1 218 77.1
Actinidia18243 Actinidia chinensis HOM05D003659 ORTHO05D004298 4.9e-96 354.8 217 77.9
Actinidia25461 Actinidia chinensis HOM05D003659 ORTHO05D004298 6.3e-96 354.4 217 77.0
ATR0739G101 Amborella trichopoda HOM05D003659 ORTHO05D004298 8.3e-96 354.0 215 76.7
vmacro19047 Vaccinium macrocarpon HOM05D003659 ORTHO05D004298 8.3e-96 354.0 217 77.0
PGSC0003DMG400014120 Solanum tuberosum HOM05D003659 ORTHO05D004298 1.4e-95 353.2 217 77.4
Lsat_1_v5_gn_5_8201 Lactuca sativa HOM05D003659 ORTHO05D004298 2.4e-95 352.4 216 76.4
CiPaw.08G006800 Carya illinoinensis HOM05D003659 ORTHO05D004298 3.1e-95 352.1 217 75.1
CSS0027457 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 4.1e-95 351.7 217 77.9
CSS0033149 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 4.1e-95 351.7 217 77.9
ECA246G1998 Erigeron canadensis HOM05D003659 ORTHO05D004298 4.1e-95 351.7 222 75.2
CAN.G407.57 Capsicum annuum HOM05D003659 ORTHO05D004298 5.4e-95 351.3 217 77.4
Solyc03g117020.4 Solanum lycopersicum HOM05D003659 ORTHO05D004298 5.4e-95 351.3 213 77.5
Sopen03g035920 Solanum pennellii HOM05D003659 ORTHO05D004298 5.4e-95 351.3 213 77.5
QL02p019557 Quercus lobata HOM05D003659 ORTHO05D004298 9.2e-95 350.5 217 76.0
PGR044G1948 Punica granatum HOM05D003659 ORTHO05D004298 1.6e-94 349.7 217 75.6
Glyma.06G062900 Glycine max HOM05D003659 ORTHO05D004298 2.7e-94 349.0 219 75.3
MSTRG.22794 Avicennia marina HOM05D003659 ORTHO05D004298 1.0e-93 347.1 217 76.5
Rhsim08G0207200 Rhododendron simsii HOM05D003659 ORTHO05D004298 1.0e-93 347.1 217 77.0
Migut.D01114 Erythranthe guttata HOM05D003659 ORTHO05D004298 1.7e-93 346.3 217 75.1
Oeu027829.1 Olea europaea HOM05D003659 ORTHO05D004298 2.3e-93 345.9 217 75.6
PSO170G6877 Papaver somniferum HOM05D003659 ORTHO05D004298 3.8e-93 345.1 220 73.2
TWI34G1103 Tripterygium wilfordii HOM05D003659 ORTHO05D004298 3.8e-93 345.1 218 74.8
Aqoxy7G01595 Aquilegia oxysepala HOM05D003659 ORTHO05D004298 6.6e-93 344.4 219 74.4
Eucgr.C02663 Eucalyptus grandis HOM05D003659 ORTHO05D004298 6.6e-93 344.4 217 73.7
AUR62030831 Chenopodium quinoa HOM05D003659 ORTHO05D004298 8.6e-93 344.0 216 73.1
Actinidia08946 Actinidia chinensis HOM05D003659 ORTHO05D004298 2.5e-92 342.4 217 74.2
Migut.I00701 Erythranthe guttata HOM05D003659 ORTHO05D004298 2.5e-92 342.4 216 74.1
Hund00440 Selenicereus undatus HOM05D003659 ORTHO05D004298 2.5e-92 342.4 216 73.6
MSTRG.11175 Avicennia marina HOM05D003659 ORTHO05D004298 4.3e-92 341.7 217 74.2
Sabra06G0205400 Salix brachista HOM05D003659 ORTHO05D004298 4.3e-92 341.7 217 73.7
HPP92_004679 Vanilla planifolia HOM05D003659 ORTHO05D004298 5.6e-92 341.3 217 73.3
PSO017G1057 Papaver somniferum HOM05D003659 ORTHO05D004298 7.3e-92 340.9 220 72.3
Potri.006G263200 Populus trichocarpa HOM05D003659 ORTHO05D004298 7.3e-92 340.9 217 72.8
GSVIVG01034217001 Vitis vinifera HOM05D003659 ORTHO05D004298 7.3e-92 340.9 215 75.3
AUR62026991 Chenopodium quinoa HOM05D003659 ORTHO05D004298 9.5e-92 340.5 216 72.2
Lalb_Chr23g0268261 Lupinus albus HOM05D003659 ORTHO05D004298 9.5e-92 340.5 222 74.8
Nitab4.5_0001454g0190 Nicotiana tabacum HOM05D003659 ORTHO05D004298 9.5e-92 340.5 226 73.5
Hund06525 Selenicereus undatus HOM05D003659 ORTHO05D004298 1.6e-91 339.7 216 75.5
ClCG05G016430 Citrullus lanatus HOM05D003659 ORTHO05D004298 2.1e-91 339.3 217 73.3
Atru.chr7.2534 Acer truncatum HOM05D003659 ORTHO05D004298 4.7e-91 338.2 217 71.4
Ciclev10009450m.g Citrus clementina HOM05D003659 ORTHO05D004298 4.7e-91 338.2 217 74.7
BcaB06g28036 Brassica carinata HOM05D003659 ORTHO05D004298 8.0e-91 337.4 217 71.4
Thhalv10000317m.g Eutrema salsugineum HOM05D003659 ORTHO05D004298 8.0e-91 337.4 217 72.4
C04p55110 Brassica napus HOM05D003659 ORTHO05D004298 1.0e-90 337.0 217 73.3
BolC4t27050H Brassica oleracea HOM05D003659 ORTHO05D004298 1.0e-90 337.0 217 73.3
CsaV3_4G036690 Cucumis sativus L. HOM05D003659 ORTHO05D004298 1.0e-90 337.0 217 72.4
TWI32G0040 Tripterygium wilfordii HOM05D003659 ORTHO05D004298 1.0e-90 337.0 218 73.9
HanXRQChr08g0235851 Helianthus annuus HOM05D003659 ORTHO05D004298 1.4e-90 336.7 216 75.0
SGA_v2.0_scaffold5G02776 Striga asiatica HOM05D003659 ORTHO05D004298 1.4e-90 336.7 217 77.0
CARHR116580 Cardamine hirsuta HOM05D003659 ORTHO05D004298 1.8e-90 336.3 217 72.4
vmacro16858 Vaccinium macrocarpon HOM05D003659 ORTHO05D004298 1.8e-90 336.3 217 75.1
BcaC02g08370 Brassica carinata HOM05D003659 ORTHO05D004298 2.3e-90 335.9 217 72.8
BolC8t51458H Brassica oleracea HOM05D003659 ORTHO05D004298 2.3e-90 335.9 217 71.0
EL10Ac9g22216 Beta vulgaris HOM05D003659 ORTHO05D004298 3.0e-90 335.5 216 72.2
GSVIVG01035892001 Vitis vinifera HOM05D003659 ORTHO05D004298 3.0e-90 335.5 217 72.8
RcHm_v2.0_Chr6g0299581 Rosa chinensis HOM05D003659 ORTHO05D004298 4.0e-90 335.1 217 71.9
Aa31LG7G12130 Aethionema arabicum HOM05D003659 ORTHO05D004298 6.8e-90 334.3 215 70.2
A04p19520 Brassica napus HOM05D003659 ORTHO05D004298 6.8e-90 334.3 217 72.8
BraA04t17546Z Brassica rapa HOM05D003659 ORTHO05D004298 6.8e-90 334.3 217 72.8
Manes.03G010100 Manihot esculenta HOM05D003659 ORTHO05D004298 6.8e-90 334.3 219 71.7
AT2G25110 Arabidopsis thaliana HOM05D003659 ORTHO05D004298 8.9e-90 334.0 217 72.4
MD15G1038400 Malus domestica HOM05D003659 ORTHO05D004298 8.9e-90 334.0 217 73.3
THA.LOC104803632 Tarenaya hassleriana HOM05D003659 ORTHO05D004298 8.9e-90 334.0 218 72.0
AL4G16270 Arabidopsis lyrata HOM05D003659 ORTHO05D004298 1.2e-89 333.6 217 72.4
Manes.16G128300 Manihot esculenta HOM05D003659 ORTHO05D004298 1.2e-89 333.6 217 72.8
Prupe.1G392400 Prunus persica HOM05D003659 ORTHO05D004298 1.2e-89 333.6 217 71.9
Carub.0004s0471 Capsella rubella HOM05D003659 ORTHO05D004298 1.5e-89 333.2 217 72.4
FvH4_2g40990 Fragaria vesca HOM05D003659 ORTHO05D004298 3.4e-89 332.0 217 72.4
FAN20G3050 Fragaria x ananassa HOM05D003659 ORTHO05D004298 4.4e-89 331.6 217 71.9
Sp4g04120 Schrenkiella parvula HOM05D003659 ORTHO05D004298 4.4e-89 331.6 217 71.4
Rhsim12G0187700 Rhododendron simsii HOM05D003659 ORTHO05D004298 7.5e-89 330.9 217 73.3
MELO3C016972.2 Cucumis melo HOM05D003659 ORTHO05D004298 9.8e-89 330.5 217 71.4
Lj9A494G39 Lonicera japonica HOM05D003659 ORTHO05D004298 9.8e-89 330.5 189 79.4
TAR625G1310 Trochodendron aralioides HOM05D003659 ORTHO05D004298 9.8e-89 330.5 217 72.4
CSS0004565 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 1.3e-88 330.1 217 72.4
CSS0014874 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 1.3e-88 330.1 217 72.4
HanXRQChr05g0153781 Helianthus annuus HOM05D003659 ORTHO05D004298 1.3e-88 330.1 213 73.7
CDE05G0949 Ceratophyllum demersum HOM05D003659 ORTHO05D004298 3.7e-88 328.6 182 81.3
Os08g0278900 Oryza sativa ssp. japonica HOM05D003659 ORTHO05D004298 3.7e-88 328.6 218 71.6
Os08g0440500 Oryza sativa ssp. japonica HOM05D003659 ORTHO05D004298 6.4e-88 327.8 219 72.6
Ah.01g006880 Amaranthus hybridus HOM05D003659 ORTHO05D004298 8.3e-88 327.4 252 63.9
FAN27G2887 Fragaria x ananassa HOM05D003659 ORTHO05D004298 8.3e-88 327.4 217 71.0
arahy.Tifrunner.gnm1.ann1.48QDBJ Arachis hypogaea HOM05D003659 ORTHO05D004298 1.8e-87 326.2 223 72.2
TAR625G1087 Trochodendron aralioides HOM05D003659 ORTHO05D004298 2.4e-87 325.9 217 71.4
arahy.Tifrunner.gnm1.ann1.85LDPV Arachis hypogaea HOM05D003659 ORTHO05D004298 4.1e-87 325.1 223 71.7
Thecc.09G017100 Theobroma cacao HOM05D003659 ORTHO05D004298 4.1e-87 325.1 218 70.2
Cpa.g.sc127.19 Carica papaya HOM05D003659 ORTHO05D004298 9.2e-87 323.9 196 76.0
Glyma.04G061900 Glycine max HOM05D003659 ORTHO05D004298 9.2e-87 323.9 184 79.3
unitig_61.g26227 Utricularia gibba HOM05D003659 ORTHO05D004298 9.2e-87 323.9 217 68.7
Sed0006058 Sechium edule HOM05D003659 ORTHO05D004298 2.7e-86 322.4 187 77.5
Gohir.A07G031500 Gossypium hirsutum HOM05D003659 ORTHO05D004298 3.5e-86 322.0 221 70.6
Gorai.001G037100 Gossypium raimondii HOM05D003659 ORTHO05D004298 3.5e-86 322.0 221 70.1
Duzib150G0849 Durio zibethinus HOM05D003659 ORTHO05D004298 7.8e-86 320.9 220 69.1
Sed0005308 Sechium edule HOM05D003659 ORTHO05D004298 2.3e-85 319.3 185 78.4
Gohir.D07G035300 Gossypium hirsutum HOM05D003659 ORTHO05D004298 3.9e-85 318.5 221 69.2
Psat5g032160 Pisum sativum HOM05D003659 ORTHO05D004298 3.9e-85 318.5 220 70.9
SEGI_01700 Sequoiadendron giganteum HOM05D003659 ORTHO05D004298 3.9e-85 318.5 207 72.5
Gohir.A05G058400 Gossypium hirsutum HOM05D003659 ORTHO05D004298 5.0e-85 318.2 220 68.2
Gorai.009G061600 Gossypium raimondii HOM05D003659 ORTHO05D004298 5.0e-85 318.2 220 68.2
Lj1g0004529 Lotus japonicus HOM05D003659 ORTHO05D004298 5.0e-85 318.2 188 78.2
Oeu004335.5 Olea europaea HOM05D003659 ORTHO05D004298 6.6e-85 317.8 236 66.9
Phvul.009G088100 Phaseolus vulgaris HOM05D003659 ORTHO05D004298 6.6e-85 317.8 182 78.6
Duzib168G1659 Durio zibethinus HOM05D003659 ORTHO05D004298 1.1e-84 317.0 218 68.3
Potri.018G020700 Populus trichocarpa HOM05D003659 ORTHO05D004298 1.9e-84 316.2 184 77.7
Gohir.D05G060500 Gossypium hirsutum HOM05D003659 ORTHO05D004298 3.3e-84 315.5 224 67.0
CDE02G2060 Ceratophyllum demersum HOM05D003659 ORTHO05D004298 4.3e-84 315.1 171 83.0
Lalb_Chr08g0244391 Lupinus albus HOM05D003659 ORTHO05D004298 1.2e-83 313.5 189 78.3
SHI18485 Sapria himalayana HOM05D003659 ORTHO05D004298 1.6e-83 313.2 220 68.6
Zm00001eb179820 Zea mays HOM05D003659 ORTHO05D004298 2.8e-83 312.4 211 69.7
Zm00001eb041170 Zea mays HOM05D003659 ORTHO05D004298 3.6e-83 312.0 211 69.7
MD08G1057800 Malus domestica HOM05D003659 ORTHO05D004298 4.7e-83 311.6 183 77.0
BcaC07g40890 Brassica carinata HOM05D003659 ORTHO05D004298 8.0e-83 310.8 217 66.8
A09p55870 Brassica napus HOM05D003659 ORTHO05D004298 8.0e-83 310.8 217 66.8
C08p38860 Brassica napus HOM05D003659 ORTHO05D004298 8.0e-83 310.8 217 66.8
BraA09t40990Z Brassica rapa HOM05D003659 ORTHO05D004298 8.0e-83 310.8 217 66.8
Haze_21430 Corylus avellana HOM05D003659 ORTHO05D004298 8.0e-83 310.8 268 59.0
unitig_0.g1106 Utricularia gibba HOM05D003659 ORTHO05D004298 1.8e-82 309.7 251 62.9
Sc12g0008380 Simmondsia chinensis HOM05D003659 ORTHO05D004298 3.1e-82 308.9 190 76.8
Medtr3g106130 Medicago truncatula HOM05D003659 ORTHO05D004298 6.8e-82 307.8 240 65.0
SalBow7G4756 Salvia bowleyana HOM05D003659 ORTHO05D004298 1.2e-81 307.0 173 79.2
COL.COLO4_03628 Corchorus olitorius HOM05D003659 ORTHO05D004298 2.5e-76 289.3 172 75.0
Ah.16g104980 Amaranthus hybridus HOM05D003659 ORTHO05D004298 4.7e-75 285.0 189 69.3
Lsat_1_v5_gn_4_87041 Lactuca sativa HOM05D003659 ORTHO05D004298 4.7e-75 285.0 218 64.7
Pp3c12_21450 Physcomitrium patens HOM05D003659 ORTHO05D004298 4.7e-75 285.0 192 67.7
arahy.Tifrunner.gnm1.ann1.7GH63I Arachis hypogaea HOM05D003659 ORTHO05D004298 2.3e-74 282.7 217 64.5
Mapoly0146s0027 Marchantia polymorpha HOM05D003659 ORTHO05D004298 2.0e-73 279.6 211 61.6
arahy.Tifrunner.gnm1.ann1.Q7FMUW Arachis hypogaea HOM05D003659 ORTHO05D004298 9.8e-73 277.3 217 63.6
Pp3c4_7140 Physcomitrium patens HOM05D003659 ORTHO05D004298 2.4e-71 272.7 191 66.0
SMO304G0007 Selaginella moellendorffii HOM05D003659 ORTHO05D004298 3.5e-70 268.9 204 63.2
CBR_g38858 Chara braunii HOM05D003659 ORTHO05D004298 1.9e-68 263.1 186 64.0
SMO340G0294 Selaginella moellendorffii HOM05D003659 ORTHO05D004298 6.8e-66 254.6 181 64.6
Pp3c9_3320 Physcomitrium patens HOM05D003659 ORTHO05D004298 2.3e-61 239.6 209 54.5
TPR.G3109 Trifolium pratense HOM05D003659 ORTHO05D004298 3.6e-59 232.3 220 57.7
HPP92_010392 Vanilla planifolia HOM05D003659 ORTHO05D004298 1.4e-58 230.3 162 64.8
TAR636G3496 Trochodendron aralioides HOM05D003659 ORTHO05D004298 1.2e-57 227.3 242 56.2
MCO11G512 Micromonas commoda HOM05D003659 ORTHO05D004298 1.6e-54 216.9 180 56.7
AUR62012468 Chenopodium quinoa HOM05D003659 ORTHO05D004298 1.3e-53 213.8 216 52.3
Dinv21405 Davidia involucrata HOM05D003659 ORTHO05D004298 1.1e-52 210.7 124 75.8
Cre13.g571750 Chlamydomonas reinhardtii HOM05D003659 ORTHO05D004298 2.5e-52 209.5 181 53.0
AUR62031594 Chenopodium quinoa HOM05D003659 ORTHO05D004298 3.8e-48 195.7 181 53.0
Nitab4.5_0026787g0010 Nicotiana tabacum HOM05D003659 ORTHO05D004298 3.8e-48 195.7 130 75.4
Cc07_g20440 Coffea canephora HOM05D003659 ORTHO05D004298 6.7e-45 184.9 119 75.6
Cc00_g05940 Coffea canephora HOM05D003659 ORTHO05D004298 1.6e-43 180.3 119 71.4
THA.LOC104804845 Tarenaya hassleriana HOM05D003659 ORTHO05D004298 2.1e-43 179.9 105 74.3
PRCOL_00006403 Prasinoderma coloniale HOM05D003659 ORTHO05D004298 2.8e-43 179.5 184 46.2
Cc08_g06110 Coffea canephora HOM05D003659 ORTHO05D004298 4.8e-43 178.7 119 73.1
Cc05_g03490 Coffea canephora HOM05D003659 ORTHO05D004298 5.3e-42 175.3 116 72.4
Cc10_g09910 Coffea canephora HOM05D003659 ORTHO05D004298 5.3e-42 175.3 119 71.4
Cc10_g10650 Coffea canephora HOM05D003659 ORTHO05D004298 1.3e-40 170.6 123 67.5
Cc05_g01640 Coffea canephora HOM05D003659 ORTHO05D004298 8.4e-40 167.9 120 70.0
Dinv40986 Davidia involucrata HOM05D003659 ORTHO05D004298 5.5e-39 165.2 126 66.7
Actinidia36884 Actinidia chinensis HOM05D003659 ORTHO05D004298 1.6e-35 153.7 108 68.5
TPR.G40670 Trifolium pratense HOM05D003659 ORTHO05D004298 1.1e-34 151.0 87 73.6
arahy.Tifrunner.gnm1.ann1.K0Y0BK Arachis hypogaea HOM05D003659 ORTHO05D004298 1.4e-34 150.6 101 70.3
Cc00_g06440 Coffea canephora HOM05D003659 ORTHO05D004298 1.7e-32 143.7 119 60.5
Cc08_g07620 Coffea canephora HOM05D003659 ORTHO05D004298 7.9e-30 134.8 75 78.7
EL10Ac2g04128 Beta vulgaris HOM05D003659 ORTHO05D004298 8.7e-29 131.3 148 46.6
Cc00_g21920 Coffea canephora HOM05D003659 ORTHO05D004298 1.6e-27 127.1 75 76.0
Ca_15770_v3 Cicer arietinum L. HOM05D003659 ORTHO05D004298 1.5e-25 120.6 67 73.1
BraA10t44716Z Brassica rapa HOM05D001880 ORTHO05D004730 2.9e-24 116.3 62 77.4
FvH4_3g15950 Fragaria vesca HOM05D003659 ORTHO05D004298 6.5e-24 115.2 82 68.3
HPP92_010427 Vanilla planifolia HOM05D003659 ORTHO05D004298 2.7e-22 109.8 97 59.8
Haze_27667 Corylus avellana HOM05D003659 ORTHO05D004298 4.8e-19 99.0 117 40.2
FAN11G3099 Fragaria x ananassa HOM05D003659 ORTHO05D004298 1.8e-18 97.1 74 64.9
AagrBONN_evm.TU.Sc2ySwM_117.1898 Anthoceros agrestis HOM05D003659 ORTHO05D004298 4.1e-18 95.9 54 75.9
Hma1.2p1_0302F.1_g118750 Hydrangea macrophylla HOM05D003659 ORTHO05D004298 4.2e-15 85.9 61 67.2
Cfa026278 Carpinus fangiana HOM05D003659 ORTHO05D121859 3.0e-13 79.7 182 33.5
Cfa024316 Carpinus fangiana HOM05D003659 ORTHO05D124421 1.5e-12 77.4 208 30.3
SHI37098 Sapria himalayana HOM05D003659 ORTHO05D004298 4.5e-09 65.9 46 63.0
Cfa024390 Carpinus fangiana HOM05D003659 ORTHO05D125208 1.3e-08 64.3 205 28.3
SHI20750 Sapria himalayana HOM05D003659 ORTHO05D004298 7.2e-07 58.5 48 56.2
SHI48633 Sapria himalayana HOM05D003659 ORTHO05D004298 1.6e-06 57.4 46 65.2
A10p26590 Brassica napus HOM05D001880 ORTHO05D004730 3.6e-06 56.2 44 50.0


User provided reference genes

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