Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025565 Daucus carota HOM05D005677 ORTHO05D006966 1.6e-82 309.3 151 100.0
DCAR_025564 Daucus carota HOM05D005677 ORTHO05D006966 2.1e-42 176.0 138 74.6
DCAR_025942 Daucus carota HOM05D005677 ORTHO05D006966 6.3e-18 94.7 135 50.4
AUR62007566 Chenopodium quinoa HOM05D005677 ORTHO05D006966 2.0e-16 89.7 121 48.8
Potri.007G025600 Populus trichocarpa HOM05D005677 ORTHO05D006966 1.5e-14 83.6 131 42.7
Haze_15089 Corylus avellana HOM05D005677 ORTHO05D006966 3.2e-14 82.4 130 46.2
Lsat_1_v5_gn_4_152101 Lactuca sativa HOM05D005677 ORTHO05D006966 3.2e-14 82.4 130 43.8
Cfa004307 Carpinus fangiana HOM05D005677 ORTHO05D006966 1.2e-13 80.5 133 43.6
Sabra07G0022600 Salix brachista HOM05D005677 ORTHO05D006966 1.2e-13 80.5 131 42.7
EL10Ac6g15562 Beta vulgaris HOM05D005677 ORTHO05D006966 1.6e-13 80.1 132 44.7
CiPaw.01G038100 Carya illinoinensis HOM05D005677 ORTHO05D006966 1.6e-13 80.1 131 45.0
Peaxi162Scf00366g10014 Petunia axillaris HOM05D005677 ORTHO05D006966 1.6e-13 80.1 131 43.5
AUR62004051 Chenopodium quinoa HOM05D005677 ORTHO05D006966 2.7e-13 79.3 122 46.7
MBI03_g28536_MAGBIO Magnolia biondii HOM05D005677 ORTHO05D006966 3.6e-13 79.0 71 59.2
Hma1.2p1_0224F.1_g094650 Hydrangea macrophylla HOM05D005677 ORTHO05D006966 6.1e-13 78.2 132 43.9
TWI53G0229 Tripterygium wilfordii HOM05D005677 ORTHO05D006966 6.1e-13 78.2 133 42.1
FvH4_1g13310 Fragaria vesca HOM05D005677 ORTHO05D006966 8.0e-13 77.8 132 43.2
Phvul.003G253400 Phaseolus vulgaris HOM05D005677 ORTHO05D006966 8.0e-13 77.8 130 43.1
FAN19G0062 Fragaria x ananassa HOM05D005677 ORTHO05D006966 1.0e-12 77.4 132 43.2
Nn2g12315 Nelumbo nucifera HOM05D005677 ORTHO05D006966 1.0e-12 77.4 155 40.6
VMungo0251G0356 Vigna mungo HOM05D005677 ORTHO05D006966 1.0e-12 77.4 130 42.3
Atru.chr3.573 Acer truncatum HOM05D005677 ORTHO05D006966 3.0e-12 75.9 143 37.1
CDE02G2571 Ceratophyllum demersum HOM05D005677 ORTHO05D006966 3.0e-12 75.9 63 66.7
RcHm_v2.0_Chr2g0101571 Rosa chinensis HOM05D005677 ORTHO05D006966 3.0e-12 75.9 128 43.8
Thecc.01G035800 Theobroma cacao HOM05D005677 ORTHO05D006966 3.0e-12 75.9 137 41.6
FAN26G2780 Fragaria x ananassa HOM05D005677 ORTHO05D006966 4.0e-12 75.5 132 41.7
Glyma.02G057000 Glycine max HOM05D005677 ORTHO05D006966 4.0e-12 75.5 132 43.9
COL.COLO4_22080 Corchorus olitorius HOM05D005677 ORTHO05D006966 5.2e-12 75.1 137 41.6
Migut.H00989 Erythranthe guttata HOM05D005677 ORTHO05D006966 5.2e-12 75.1 123 43.9
Nitab4.5_0000178g0070 Nicotiana tabacum HOM05D005677 ORTHO05D006966 6.7e-12 74.7 131 43.5
Oeu042263.1 Olea europaea HOM05D005677 ORTHO05D006966 6.7e-12 74.7 134 40.3
Solyc02g085210.1 Solanum lycopersicum HOM05D005677 ORTHO05D006966 6.7e-12 74.7 134 44.0
Dinv39987 Davidia involucrata HOM05D005677 ORTHO05D006966 8.8e-12 74.3 143 40.6
Actinidia19186 Actinidia chinensis HOM05D005677 ORTHO05D006966 1.2e-11 73.9 142 38.7
Cpa.g.sc6.112 Carica papaya HOM05D005677 ORTHO05D006966 1.2e-11 73.9 78 56.4
LjContig00448g0024692 Lotus japonicus HOM05D005677 ORTHO05D006966 1.5e-11 73.6 131 44.3
MD15G1261800 Malus domestica HOM05D005677 ORTHO05D006966 1.5e-11 73.6 76 57.9
Medtr8g077610 Medicago truncatula HOM05D005677 ORTHO05D006966 1.5e-11 73.6 119 47.9
Ca_22266_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 2.0e-11 73.2 128 41.4
Ca_22280_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 2.0e-11 73.2 128 41.4
Ciclev10026228m.g Citrus clementina HOM05D005677 ORTHO05D006966 2.0e-11 73.2 137 43.1
Cc06_g21220 Coffea canephora HOM05D005677 ORTHO05D006966 2.0e-11 73.2 72 58.3
Lj2P453T29 Lonicera japonica HOM05D005677 ORTHO05D006966 2.0e-11 73.2 93 50.5
Oeu041446.1 Olea europaea HOM05D005677 ORTHO05D006966 2.0e-11 73.2 150 38.0
Gohir.A02G165300 Gossypium hirsutum HOM05D005677 ORTHO05D006966 2.6e-11 72.8 72 56.9
HanXRQChr09g0261461 Helianthus annuus HOM05D005677 ORTHO05D006966 2.6e-11 72.8 138 40.6
Nitab4.5_0001385g0030 Nicotiana tabacum HOM05D005677 ORTHO05D006966 2.6e-11 72.8 131 41.2
arahy.Tifrunner.gnm1.ann1.V4VRBH Arachis hypogaea HOM05D005677 ORTHO05D006966 3.3e-11 72.4 135 40.7
Psat4g079800 Pisum sativum HOM05D005677 ORTHO05D006966 3.3e-11 72.4 75 54.7
QL06p046093 Quercus lobata HOM05D005677 ORTHO05D006966 3.3e-11 72.4 119 43.7
vmacro17831 Vaccinium macrocarpon HOM05D005677 ORTHO05D006966 3.3e-11 72.4 72 58.3
Ah.03g140850 Amaranthus hybridus HOM05D005677 ORTHO05D006966 4.4e-11 72.0 122 43.4
PGSC0003DMG400003597 Solanum tuberosum HOM05D005677 ORTHO05D006966 4.4e-11 72.0 133 42.9
Lalb_Chr16g0388501 Lupinus albus HOM05D005677 ORTHO05D006966 5.7e-11 71.6 136 41.2
Sopen02g029910 Solanum pennellii HOM05D005677 ORTHO05D006966 5.7e-11 71.6 134 42.5
FAN28G0162 Fragaria x ananassa HOM05D005677 ORTHO05D006966 7.5e-11 71.2 127 42.5
Psat4g092640 Pisum sativum HOM05D005677 ORTHO05D006966 7.5e-11 71.2 73 56.2
ClCG01G019540 Citrullus lanatus HOM05D005677 ORTHO05D006966 9.7e-11 70.9 158 36.7
arahy.Tifrunner.gnm1.ann1.6977IM Arachis hypogaea HOM05D005677 ORTHO05D006966 1.3e-10 70.5 135 40.0
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 1.7e-10 70.1 95 50.5
HPP92_019510 Vanilla planifolia HOM05D005677 ORTHO05D006966 1.7e-10 70.1 82 56.1
unitig_32.g11368 Utricularia gibba HOM05D005677 ORTHO05D006966 2.2e-10 69.7 69 58.0
Gorai.003G015000 Gossypium raimondii HOM05D005677 ORTHO05D006966 3.7e-10 68.9 137 40.9
Migut.L00520 Erythranthe guttata HOM05D005677 ORTHO05D006966 4.8e-10 68.6 77 54.5
Rhsim08G0117300 Rhododendron simsii HOM05D000412 ORTHO05D002774 4.8e-10 68.6 106 47.2
Prupe.7G154600 Prunus persica HOM05D005677 ORTHO05D006966 6.3e-10 68.2 76 52.6
Gohir.D03G014700 Gossypium hirsutum HOM05D005677 ORTHO05D006966 8.2e-10 67.8 131 42.0
CSS0028163 Camellia sinensis var. sinensis HOM05D005677 ORTHO05D006966 1.1e-09 67.4 128 39.8
Gohir.A11G184300 Gossypium hirsutum HOM05D005677 ORTHO05D006966 1.1e-09 67.4 132 40.9
Manes.01G135600 Manihot esculenta HOM05D005677 ORTHO05D006966 1.1e-09 67.4 138 40.6
CAN.G358.85 Capsicum annuum HOM05D005677 ORTHO05D006966 1.4e-09 67.0 143 40.6
Duzib147G0715 Durio zibethinus HOM05D005677 ORTHO05D006966 1.4e-09 67.0 137 39.4
Gorai.007G203300 Gossypium raimondii HOM05D005677 ORTHO05D006966 1.4e-09 67.0 135 39.3
Eucgr.H01270 Eucalyptus grandis HOM05D005677 ORTHO05D006966 1.8e-09 66.6 113 40.7
FAN23G0294 Fragaria x ananassa HOM05D005677 ORTHO05D006966 1.8e-09 66.6 74 54.1
Gohir.D11G190800 Gossypium hirsutum HOM05D005677 ORTHO05D006966 1.8e-09 66.6 135 40.0
Aa31LG1G15100 Aethionema arabicum HOM05D005677 ORTHO05D006966 2.4e-09 66.2 76 51.3
CANSAT01G0942 Cannabis sativa HOM05D005677 ORTHO05D006966 2.4e-09 66.2 147 38.8
AL8G23360 Arabidopsis lyrata HOM05D005677 ORTHO05D006966 3.1e-09 65.9 72 55.6
Eucgr.L02813 Eucalyptus grandis HOM05D005677 ORTHO05D006966 3.1e-09 65.9 104 42.3
PSO731G0124 Papaver somniferum HOM05D005677 ORTHO05D006966 3.1e-09 65.9 71 50.7
THA.LOC104821296 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 5.3e-09 65.1 139 36.0
PSO210G3110 Papaver somniferum HOM05D005677 ORTHO05D006966 7.0e-09 64.7 71 52.1
CsaV3_6G046230 Cucumis sativus L. HOM05D005677 ORTHO05D006966 9.1e-09 64.3 145 36.6
AT5G49560 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 1.2e-08 63.9 114 41.2
Carub.0008s2796 Capsella rubella HOM05D005677 ORTHO05D006966 1.2e-08 63.9 114 39.5
CARHR281190 Cardamine hirsuta HOM05D005677 ORTHO05D006966 1.2e-08 63.9 71 52.1
MELO3C007826.2 Cucumis melo HOM05D005677 ORTHO05D006966 1.2e-08 63.9 145 35.9
ECA232G2278 Erigeron canadensis HOM05D005677 ORTHO05D006966 1.2e-08 63.9 75 53.3
Sp7g14210 Schrenkiella parvula HOM05D005677 ORTHO05D006966 1.2e-08 63.9 74 51.4
TAR625G0490 Trochodendron aralioides HOM05D005677 ORTHO05D006966 1.6e-08 63.5 67 58.2
Aa31LG4G18970 Aethionema arabicum HOM05D005677 ORTHO05D006966 2.0e-08 63.2 121 38.0
PGR102G2535 Punica granatum HOM05D005677 ORTHO05D006966 2.7e-08 62.8 98 43.9
SalBow5G4467 Salvia bowleyana HOM05D005677 ORTHO05D006966 2.7e-08 62.8 109 39.4
THA.LOC104821292 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 3.5e-08 62.4 139 36.0
Carub.0005s1724 Capsella rubella HOM05D005677 ORTHO05D006966 7.7e-08 61.2 119 41.2
Sed0020674 Sechium edule HOM05D005677 ORTHO05D006966 7.7e-08 61.2 77 51.9
THA.LOC109115976 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 7.7e-08 61.2 139 35.3
ATR0772G168 Amborella trichopoda HOM05D005677 ORTHO05D006966 1.0e-07 60.8 67 53.7
CARHR160400 Cardamine hirsuta HOM05D005677 ORTHO05D006966 1.3e-07 60.5 96 44.8
AT3G50850 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 1.7e-07 60.1 75 50.7
Thhalv10027491m.g Eutrema salsugineum HOM05D005677 ORTHO05D006966 1.7e-07 60.1 80 47.5
Oeu033645.1 Olea europaea HOM05D005677 ORTHO05D006966 2.2e-07 59.7 60 53.3
BcaC09g50280 Brassica carinata HOM05D005677 ORTHO05D006966 3.8e-07 58.9 133 36.1
C01p27040 Brassica napus HOM05D005677 ORTHO05D006966 3.8e-07 58.9 133 36.1
BolC1t02652H Brassica oleracea HOM05D005677 ORTHO05D006966 3.8e-07 58.9 133 36.1
BcaB01g00573 Brassica carinata HOM05D005677 ORTHO05D006966 6.5e-07 58.2 74 50.0
A01p21690 Brassica napus HOM05D005677 ORTHO05D006966 6.5e-07 58.2 135 34.8
BraA01t02078Z Brassica rapa HOM05D005677 ORTHO05D006966 6.5e-07 58.2 135 34.8
TPR.G24140 Trifolium pratense HOM05D005677 ORTHO05D006966 5.5e-06 55.1 125 36.8
Thhalv10010630m.g Eutrema salsugineum HOM05D005677 ORTHO05D006966 7.2e-06 54.7 75 46.7
BolC8t50224H Brassica oleracea HOM05D005677 ORTHO05D006966 9.4e-06 54.3 78 44.9


User provided reference genes

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