Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.5e-236 822.4 409 100.0
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 3.4e-159 565.5 378 73.0
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.2e-156 557.0 392 69.9
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 9.6e-154 547.4 381 70.1
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 3.1e-152 542.3 390 67.9
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 1.5e-151 540.0 374 72.2
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 1.5e-151 540.0 404 64.9
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 2.0e-151 539.7 346 74.3
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 3.4e-151 538.9 382 70.9
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 1.7e-150 536.6 378 69.6
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 8.4e-150 534.3 373 71.3
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 1.6e-148 530.0 382 68.8
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 6.0e-148 528.1 372 69.1
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 6.0e-148 528.1 388 66.5
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 6.0e-148 528.1 382 68.1
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 7.9e-148 527.7 396 66.7
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 1.3e-147 526.9 422 64.9
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 1.8e-147 526.6 385 67.5
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 2.3e-147 526.2 384 66.7
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.3e-147 526.2 358 70.4
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 3.9e-147 525.4 415 63.6
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 5.1e-147 525.0 388 68.3
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 5.1e-147 525.0 361 70.4
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 5.1e-147 525.0 361 70.4
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 5.1e-147 525.0 344 71.8
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 8.7e-147 524.2 393 66.7
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 1.1e-146 523.9 375 68.0
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 4.3e-146 521.9 343 72.0
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 1.6e-145 520.0 384 66.4
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.6e-145 520.0 341 74.2
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 1.6e-145 520.0 405 65.2
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 2.1e-145 519.6 400 65.2
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 3.7e-145 518.8 344 71.2
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 4.8e-145 518.5 344 71.5
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 8.2e-145 517.7 391 65.2
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 1.1e-144 517.3 371 67.1
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 1.8e-144 516.5 344 70.6
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 1.8e-144 516.5 381 67.2
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.4e-144 516.2 340 70.0
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 9.0e-144 514.2 392 65.3
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 9.0e-144 514.2 392 65.3
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 1.2e-143 513.8 406 64.5
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 1.2e-143 513.8 373 67.3
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 2.0e-143 513.1 426 62.7
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 2.6e-143 512.7 389 65.6
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 3.4e-143 512.3 362 69.1
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 3.4e-143 512.3 343 70.6
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 1.0e-142 510.8 419 63.0
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 1.7e-142 510.0 377 65.5
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 2.2e-142 509.6 341 71.3
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 2.2e-142 509.6 376 66.5
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 3.8e-142 508.8 356 68.5
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 4.9e-142 508.4 374 68.2
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 4.9e-142 508.4 309 78.6
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 8.4e-142 507.7 372 68.3
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 1.4e-141 506.9 399 64.7
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 1.0e-139 500.7 404 61.9
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.3e-139 500.4 377 64.7
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.8e-139 500.0 411 61.6
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 1.8e-139 500.0 419 61.3
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 1.5e-138 496.9 375 64.5
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 7.4e-138 494.6 394 61.9
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 7.4e-138 494.6 377 63.7
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 1.3e-137 493.8 345 67.5
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 3.7e-137 492.3 394 61.7
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.1e-136 490.7 371 63.6
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 1.4e-136 490.3 343 67.9
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 5.3e-136 488.4 351 66.7
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 5.3e-136 488.4 343 68.2
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 1.2e-135 487.3 402 61.2
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 2.6e-135 486.1 376 62.5
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 7.7e-135 484.6 348 65.2
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.7e-134 483.4 321 72.6
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 2.2e-134 483.0 365 62.7
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 2.2e-134 483.0 365 62.7
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 2.9e-134 482.6 380 61.6
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 3.8e-134 482.3 363 64.5
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 5.0e-134 481.9 394 59.6
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 6.5e-134 481.5 342 69.0
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 7.2e-133 478.0 366 62.6
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 7.2e-133 478.0 345 64.9
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 7.2e-133 478.0 345 64.9
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 7.2e-133 478.0 345 64.9
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 9.4e-133 477.6 407 58.7
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 2.1e-132 476.5 318 70.8
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 8.8e-131 471.1 367 61.6
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.5e-127 460.3 345 63.2
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 5.0e-126 455.3 317 68.1
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 2.3e-123 446.4 366 59.3
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 3.7e-121 439.1 345 62.9
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 1.7e-118 430.3 347 60.8
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 2.9e-118 429.5 369 57.7
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 1.9e-117 426.8 331 63.7
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 2.5e-117 426.4 296 70.3
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 5.5e-117 425.2 284 74.3
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 1.4e-112 410.6 370 56.2
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 8.5e-110 401.4 248 75.0
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 5.3e-104 382.1 248 71.8
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 1.2e-103 380.9 256 69.9
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 2.5e-101 373.2 352 52.6
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.2e-98 364.4 326 58.3
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.7e-94 350.5 273 65.9
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.1e-92 343.6 316 57.9
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 6.3e-89 332.0 249 65.5
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 2.3e-86 323.6 411 45.3
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 8.9e-83 311.6 365 43.8
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 5.4e-80 302.4 335 43.9
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 3.2e-64 250.0 344 37.8
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.4e-59 234.6 184 59.2
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 7.6e-42 175.6 126 60.3
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.0e-38 165.2 158 51.9
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 1.5e-37 161.4 188 44.1
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 2.8e-36 157.1 158 55.1
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 3.4e-34 150.2 91 72.5
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 5.8e-34 149.4 88 77.3
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 9.0e-27 125.6 98 61.2
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 9.3e-24 115.5 89 61.8
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 4.6e-15 86.7 53 67.9
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 1.5e-13 81.6 93 50.5


User provided reference genes

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