Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 4.0e-30 134.0 64 100.0
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 1.2e-21 105.9 58 79.3
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 1.5e-21 105.5 58 82.8
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 2.0e-21 105.1 61 77.0
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 3.4e-21 104.4 61 80.3
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 5.7e-21 103.6 61 78.7
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 5.7e-21 103.6 61 78.7
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 7.5e-21 103.2 58 77.6
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 9.8e-21 102.8 61 78.7
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 1.7e-20 102.1 59 74.6
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 2.2e-20 101.7 56 76.8
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 2.2e-20 101.7 58 77.6
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 3.7e-20 100.9 58 79.3
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 3.7e-20 100.9 57 78.9
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 3.7e-20 100.9 58 75.9
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 4.9e-20 100.5 63 76.2
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 4.9e-20 100.5 63 76.2
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 4.9e-20 100.5 63 76.2
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 4.9e-20 100.5 56 76.8
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 4.9e-20 100.5 63 76.2
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 6.4e-20 100.1 61 75.4
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 6.4e-20 100.1 61 73.8
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 6.4e-20 100.1 61 75.4
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 1.1e-19 99.4 61 77.0
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 1.4e-19 99.0 61 73.8
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 1.4e-19 99.0 61 77.0
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 1.8e-19 98.6 61 73.8
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 2.4e-19 98.2 63 69.8
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 2.4e-19 98.2 61 73.8
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 4.1e-19 97.4 61 73.8
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 5.4e-19 97.1 63 74.6
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 5.4e-19 97.1 56 75.0
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 7.0e-19 96.7 56 73.2
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 7.0e-19 96.7 56 73.2
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 7.0e-19 96.7 60 75.0
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 9.2e-19 96.3 64 70.3
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 1.2e-18 95.9 56 75.0
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 1.6e-18 95.5 58 74.1
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 1.6e-18 95.5 58 74.1
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.6e-18 95.5 56 73.2
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 2.0e-18 95.1 60 68.3
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 2.7e-18 94.7 56 71.4
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 3.5e-18 94.4 60 75.0
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 4.6e-18 94.0 58 74.1
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 4.6e-18 94.0 58 74.1
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 1.3e-17 92.4 61 73.8
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 1.3e-17 92.4 60 73.3
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 8.6e-17 89.7 62 66.1
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 8.6e-17 89.7 61 72.1
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 1.1e-16 89.4 53 73.6
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 1.1e-16 89.4 65 64.6
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 1.9e-16 88.6 55 69.1
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 3.3e-16 87.8 57 68.4
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 7.3e-16 86.7 71 63.4
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 4.7e-15 84.0 61 65.6
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 5.8e-13 77.0 60 60.0
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 5.8e-13 77.0 55 60.0
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 1.3e-12 75.9 61 59.0
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 4.9e-12 73.9 63 63.5
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 5.4e-11 70.5 41 73.2
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 7.0e-11 70.1 57 52.6
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 4.6e-10 67.4 57 45.6
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 1.5e-08 62.4 58 55.2
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 3.3e-08 61.2 37 78.4
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 5.6e-08 60.5 61 55.7
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 5.6e-08 60.5 61 54.1
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 5.6e-08 60.5 61 54.1
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 1.6e-07 58.9 33 72.7
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 2.8e-07 58.2 33 69.7
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 2.8e-07 58.2 61 52.5
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 1.4e-06 55.8 34 67.6
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 1.8e-06 55.5 32 71.9
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 4.0e-06 54.3 30 86.7
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 5.2e-06 53.9 55 45.5


User provided reference genes

Program Settings