Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025282 Daucus carota HOM05D004265 ORTHO05D005175 1.0e-108 397.1 257 100.0
DCAR_005425 Daucus carota HOM05D004265 ORTHO05D005175 2.7e-85 319.3 224 72.3
Lalb_Chr02g0147811 Lupinus albus HOM05D004265 ORTHO05D005175 5.1e-60 235.3 231 61.0
Lj5g0009766 Lotus japonicus HOM05D004265 ORTHO05D005175 6.2e-58 228.4 189 61.9
Atru.chr2.195 Acer truncatum HOM05D004265 ORTHO05D005175 9.0e-57 224.6 156 71.8
CiPaw.08G155500 Carya illinoinensis HOM05D004265 ORTHO05D005175 1.5e-56 223.8 157 73.2
Actinidia01508 Actinidia chinensis HOM05D004265 ORTHO05D005175 2.6e-56 223.0 156 69.9
Glyma.20G097600 Glycine max HOM05D004265 ORTHO05D005175 3.4e-56 222.6 218 58.7
Cpa.g.sc48.160 Carica papaya HOM05D004265 ORTHO05D005175 4.5e-56 222.2 169 65.7
Dinv30893 Davidia involucrata HOM05D004265 ORTHO05D005175 4.5e-56 222.2 156 70.5
CANSAT54G0622 Cannabis sativa HOM05D004265 ORTHO05D005175 1.7e-55 220.3 221 55.2
VMungo0720G2336 Vigna mungo HOM05D004265 ORTHO05D005175 2.9e-55 219.5 179 65.9
Rhsim05G0126500 Rhododendron simsii HOM05D004265 ORTHO05D005175 3.8e-55 219.2 186 60.8
Dinv24444 Davidia involucrata HOM05D004265 ORTHO05D005175 6.4e-55 218.4 169 75.7
TPR.G2612 Trifolium pratense HOM05D004265 ORTHO05D005175 6.4e-55 218.4 155 74.8
Thecc.05G323000 Theobroma cacao HOM05D004265 ORTHO05D005175 1.4e-54 217.2 155 69.0
Eucgr.H03290 Eucalyptus grandis HOM05D004265 ORTHO05D005175 2.4e-54 216.5 183 60.1
TWI56G1455 Tripterygium wilfordii HOM05D004265 ORTHO05D005175 4.2e-54 215.7 155 68.4
Phvul.007G201300 Phaseolus vulgaris HOM05D004265 ORTHO05D005175 9.3e-54 214.5 157 66.9
Medtr1g084040 Medicago truncatula HOM05D004265 ORTHO05D005175 1.6e-53 213.8 219 53.9
QL03p013649 Quercus lobata HOM05D004265 ORTHO05D005175 1.6e-53 213.8 177 67.8
QL03p039848 Quercus lobata HOM05D004265 ORTHO05D005175 1.6e-53 213.8 177 67.8
Migut.B00969 Erythranthe guttata HOM05D004265 ORTHO05D005175 2.1e-53 213.4 215 54.4
ECA234G3802 Erigeron canadensis HOM05D004265 ORTHO05D005175 6.0e-53 211.8 228 50.9
Glyma.10G147100 Glycine max HOM05D004265 ORTHO05D005175 6.0e-53 211.8 219 58.0
arahy.Tifrunner.gnm1.ann1.7983KJ Arachis hypogaea HOM05D004265 ORTHO05D005175 7.9e-53 211.5 220 53.2
arahy.Tifrunner.gnm1.ann1.S7F1TF Arachis hypogaea HOM05D004265 ORTHO05D005175 1.0e-52 211.1 220 52.7
MBI18_g17317_MAGBIO Magnolia biondii HOM05D004265 ORTHO05D005175 3.0e-52 209.5 157 68.8
HanXRQChr10g0294471 Helianthus annuus HOM05D004265 ORTHO05D005175 5.1e-52 208.8 187 58.3
Lsat_1_v5_gn_5_104100 Lactuca sativa HOM05D004265 ORTHO05D005175 8.7e-52 208.0 157 64.3
SalBow7G1726 Salvia bowleyana HOM05D004265 ORTHO05D005175 1.1e-51 207.6 173 60.1
AUR62006753 Chenopodium quinoa HOM05D004265 ORTHO05D005175 1.5e-51 207.2 153 72.5
MD12G1206000 Malus domestica HOM05D004265 ORTHO05D005175 1.5e-51 207.2 185 58.4
RcHm_v2.0_Chr3g0457041 Rosa chinensis HOM05D004265 ORTHO05D005175 1.5e-51 207.2 150 66.7
CSS0008259 Camellia sinensis var. sinensis HOM05D004265 ORTHO05D005175 1.9e-51 206.8 156 76.3
AUR62000397 Chenopodium quinoa HOM05D004265 ORTHO05D005175 5.6e-51 205.3 153 75.8
Potri.005G017400 Populus trichocarpa HOM05D004265 ORTHO05D005175 5.6e-51 205.3 178 59.6
PSO210G0294 Papaver somniferum HOM05D004265 ORTHO05D005175 9.6e-51 204.5 178 60.7
Ah.04g158690 Amaranthus hybridus HOM05D004265 ORTHO05D005175 1.3e-50 204.1 168 67.9
Ciclev10002200m.g Citrus clementina HOM05D004265 ORTHO05D005175 1.3e-50 204.1 220 58.6
PSO761G0637 Papaver somniferum HOM05D004265 ORTHO05D005175 1.3e-50 204.1 174 63.2
Ca_09300_v3 Cicer arietinum L. HOM05D001672 ORTHO05D007349 2.1e-50 203.4 150 64.0
Medtr7g112110 Medicago truncatula HOM05D004265 ORTHO05D005175 2.8e-50 203.0 155 63.9
Cc02_g35030 Coffea canephora HOM05D004265 ORTHO05D005175 3.7e-50 202.6 182 64.3
Lj1g0016387 Lotus japonicus HOM05D004265 ORTHO05D005175 1.8e-49 200.3 153 62.7
Hund21868 Selenicereus undatus HOM05D004265 ORTHO05D005175 1.8e-49 200.3 153 73.2
Aqoxy2G02767 Aquilegia oxysepala HOM05D004265 ORTHO05D005175 2.4e-49 199.9 153 73.9
unitig_37.g12619 Utricularia gibba HOM05D004265 ORTHO05D005175 2.4e-49 199.9 168 59.5
EL10Ac4g09452 Beta vulgaris HOM05D004265 ORTHO05D005175 4.0e-49 199.1 153 75.2
HPP92_026862 Vanilla planifolia HOM05D004265 ORTHO05D005175 5.3e-49 198.7 174 58.0
GSVIVG01031240001 Vitis vinifera HOM05D004265 ORTHO05D005175 1.5e-48 197.2 156 69.9
Duzib106G0903 Durio zibethinus HOM05D004265 ORTHO05D005175 2.0e-48 196.8 184 59.2
Oeu013207.1 Olea europaea HOM05D004265 ORTHO05D005175 2.6e-48 196.4 158 61.4
Os03g0307000 Oryza sativa ssp. japonica HOM05D004265 ORTHO05D005175 2.6e-48 196.4 152 71.1
Nn3g16212 Nelumbo nucifera HOM05D004265 ORTHO05D005175 3.4e-48 196.1 174 64.9
Psat3g012800 Pisum sativum HOM05D004265 ORTHO05D005175 1.3e-47 194.1 152 72.4
Prupe.6G313200 Prunus persica HOM05D004265 ORTHO05D005175 1.3e-47 194.1 178 66.9
SHI18053 Sapria himalayana HOM05D001712 ORTHO05D001731 1.3e-47 194.1 150 64.0
Sed0011283 Sechium edule HOM05D004265 ORTHO05D005175 6.4e-47 191.8 152 71.7
Sc16g0009030 Simmondsia chinensis HOM05D004265 ORTHO05D005175 6.4e-47 191.8 165 58.2
AL1G66120 Arabidopsis lyrata HOM05D004265 ORTHO05D005175 1.4e-46 190.7 167 65.3
Hma1.2p1_0052F.1_g030750 Hydrangea macrophylla HOM05D004265 ORTHO05D005175 1.4e-46 190.7 156 62.2
AT1G56423 Arabidopsis thaliana HOM05D004265 ORTHO05D005175 2.4e-46 189.9 156 70.5
Lj5P334T30 Lonicera japonica HOM05D004265 ORTHO05D005175 7.1e-46 188.3 155 71.6
PGR031G2746 Punica granatum HOM05D004265 ORTHO05D005175 9.3e-46 188.0 172 67.4
Zm00001eb014630 Zea mays HOM05D004265 ORTHO05D005175 1.2e-45 187.6 149 59.1
Peaxi162Scf00750g00013 Petunia axillaris HOM05D001712 ORTHO05D001731 2.1e-45 186.8 181 54.1
Potri.013G008700 Populus trichocarpa HOM05D004265 ORTHO05D005175 2.7e-45 186.4 152 59.2
Carub.0002s0772 Capsella rubella HOM05D004265 ORTHO05D005175 6.0e-45 185.3 173 54.9
Glyma.19G228500 Glycine max HOM05D004265 ORTHO05D005175 1.8e-44 183.7 154 57.1
Lalb_Chr18g0046091 Lupinus albus HOM05D004265 ORTHO05D005175 2.3e-44 183.3 148 62.2
SGA_v2.0_scaffold53G19289 Striga asiatica HOM05D004265 ORTHO05D005175 5.1e-44 182.2 149 67.8
Haze_04061 Corylus avellana HOM05D004265 ORTHO05D005175 6.7e-44 181.8 183 54.6
Sabra05G0011400 Salix brachista HOM05D004265 ORTHO05D005175 1.1e-43 181.0 152 57.9
Phvul.001G225100 Phaseolus vulgaris HOM05D004265 ORTHO05D005175 4.3e-43 179.1 154 55.2
Peaxi162Scf00484g00005 Petunia axillaris HOM05D004265 ORTHO05D005175 5.6e-43 178.7 217 46.5
HanXRQChr03g0072861 Helianthus annuus HOM05D004265 ORTHO05D005175 7.4e-43 178.3 153 56.2
MD04G1193100 Malus domestica HOM05D004265 ORTHO05D005175 7.4e-43 178.3 150 71.3
CARHR055200 Cardamine hirsuta HOM05D004265 ORTHO05D005175 1.6e-42 177.2 160 56.2
FAN05G3791 Fragaria x ananassa HOM05D004265 ORTHO05D005175 2.8e-42 176.4 150 68.7
FAN09G1150 Fragaria x ananassa HOM05D004265 ORTHO05D005175 2.8e-42 176.4 150 68.7
Medtr7g112120 Medicago truncatula HOM05D004265 ORTHO05D005175 2.8e-42 176.4 149 59.7
Zm00001eb396130 Zea mays HOM05D004265 ORTHO05D005175 8.2e-42 174.9 180 48.9
CDE11G0488 Ceratophyllum demersum HOM05D004265 ORTHO05D005175 1.4e-41 174.1 149 69.1
FAN02G3541 Fragaria x ananassa HOM05D004265 ORTHO05D005175 1.8e-41 173.7 150 68.0
Psat0s3400g0040 Pisum sativum HOM05D004265 ORTHO05D005175 1.8e-41 173.7 211 55.0
HPP92_003567 Vanilla planifolia HOM05D004265 ORTHO05D005175 1.8e-41 173.7 165 63.6
Manes.08G111300 Manihot esculenta HOM05D004265 ORTHO05D005175 3.1e-41 172.9 154 57.1
Ca_10171_v3 Cicer arietinum L. HOM05D004265 ORTHO05D005175 6.9e-41 171.8 180 55.6
Cfa006702 Carpinus fangiana HOM05D004265 ORTHO05D005175 1.2e-40 171.0 183 52.5
ATR0796G255 Amborella trichopoda HOM05D004265 ORTHO05D005175 1.5e-40 170.6 170 60.6
FvH4_6g07440 Fragaria vesca HOM05D004265 ORTHO05D005175 1.5e-40 170.6 150 67.3
FAN14G5021 Fragaria x ananassa HOM05D004265 ORTHO05D005175 1.5e-40 170.6 150 67.3
Lsat_1_v5_gn_9_122281 Lactuca sativa HOM05D004265 ORTHO05D005175 2.0e-40 170.2 148 55.4
PGSC0003DMG400002801 Solanum tuberosum HOM05D004265 ORTHO05D005175 3.4e-40 169.5 220 51.8
Sp2g06420 Schrenkiella parvula HOM05D004265 ORTHO05D005175 5.8e-40 168.7 167 53.3
CiPaw.07G029600 Carya illinoinensis HOM05D004265 ORTHO05D005175 7.6e-40 168.3 157 54.8
Nitab4.5_0004873g0020 Nicotiana tabacum HOM05D004265 ORTHO05D005175 1.0e-39 167.9 171 58.5
Nitab4.5_0000368g0100 Nicotiana tabacum HOM05D004265 ORTHO05D005175 1.3e-39 167.5 219 49.8
VMungo1383G0172 Vigna mungo HOM05D004265 ORTHO05D005175 2.2e-39 166.8 148 59.5
Duzib177G0587 Durio zibethinus HOM05D004265 ORTHO05D005175 3.8e-39 166.0 155 56.1
SMO119G0102 Selaginella moellendorffii HOM05D004265 ORTHO05D005175 3.8e-39 166.0 142 54.2
Manes.09G176700 Manihot esculenta HOM05D004265 ORTHO05D005175 8.4e-39 164.9 219 45.2
Solyc01g100480.3 Solanum lycopersicum HOM05D004265 ORTHO05D005175 2.5e-38 163.3 155 62.6
Sopen01g043990 Solanum pennellii HOM05D004265 ORTHO05D005175 3.2e-38 162.9 180 55.6
SEGI_19544 Sequoiadendron giganteum HOM05D004265 ORTHO05D005175 2.7e-37 159.8 148 63.5
Oeu016567.1 Olea europaea HOM05D004265 ORTHO05D005175 3.5e-37 159.5 104 71.2
CSS0024329 Camellia sinensis var. sinensis HOM05D004265 ORTHO05D005175 2.3e-36 156.8 162 50.0
DCAR_029352 Daucus carota HOM05D004265 ORTHO05D005175 3.0e-36 156.4 150 62.0
Peaxi162Scf00673g00321 Petunia axillaris HOM05D004265 ORTHO05D005175 3.0e-36 156.4 220 48.6
CSS0041734 Camellia sinensis var. sinensis HOM05D004265 ORTHO05D005175 5.1e-36 155.6 162 49.4
Glyma.03G231300 Glycine max HOM05D004265 ORTHO05D005175 4.3e-35 152.5 165 49.7
AagrBONN_evm.TU.Sc2ySwM_228.834 Anthoceros agrestis HOM05D004265 ORTHO05D005175 7.4e-35 151.8 169 46.7
CsaV3_2G007060 Cucumis sativus L. HOM05D004265 ORTHO05D005175 6.3e-34 148.7 186 52.7
Gohir.A13G175800 Gossypium hirsutum HOM05D004265 ORTHO05D005175 6.3e-34 148.7 181 50.3
Hma1.2p1_0486F.1_g163300 Hydrangea macrophylla HOM05D004265 ORTHO05D005175 6.3e-34 148.7 149 49.7
Actinidia25851 Actinidia chinensis HOM05D004265 ORTHO05D005175 1.1e-33 147.9 149 47.7
BcaC04g22056 Brassica carinata HOM05D004265 ORTHO05D005175 1.4e-33 147.5 166 54.2
Gohir.A11G293141 Gossypium hirsutum HOM05D004265 ORTHO05D005175 1.4e-33 147.5 152 59.2
Gohir.D11G307566 Gossypium hirsutum HOM05D004265 ORTHO05D005175 1.4e-33 147.5 152 59.2
Gorai.007G338000 Gossypium raimondii HOM05D004265 ORTHO05D005175 1.4e-33 147.5 152 59.2
C09p24060 Brassica napus HOM05D004265 ORTHO05D005175 2.4e-33 146.7 166 54.2
BolC9t55323H Brassica oleracea HOM05D004265 ORTHO05D005175 4.1e-33 146.0 166 53.6
Gohir.D11G299703 Gossypium hirsutum HOM05D004265 ORTHO05D005175 4.1e-33 146.0 152 58.6
Thhalv10023634m.g Eutrema salsugineum HOM05D004265 ORTHO05D005175 7.6e-32 141.7 156 55.1
BcaB07g31123 Brassica carinata HOM05D004265 ORTHO05D005175 1.3e-31 141.0 178 51.1
Gohir.D13G181500 Gossypium hirsutum HOM05D004265 ORTHO05D005175 1.7e-31 140.6 181 48.6
Gorai.013G207000 Gossypium raimondii HOM05D004265 ORTHO05D005175 1.7e-31 140.6 181 48.6
THA.LOC104816889 Tarenaya hassleriana HOM05D004265 ORTHO05D005175 2.2e-31 140.2 159 58.5
Lsat_1_v5_gn_3_11681 Lactuca sativa HOM05D004265 ORTHO05D005175 2.9e-31 139.8 137 54.0
BraA09t37526Z Brassica rapa HOM05D004265 ORTHO05D005175 6.5e-31 138.7 156 55.1
Mapoly0127s0047 Marchantia polymorpha HOM05D004265 ORTHO05D005175 8.5e-31 138.3 177 41.8
COL.COLO4_05553 Corchorus olitorius HOM05D004265 ORTHO05D005175 1.1e-30 137.9 183 53.0
Rhsim01G0290900 Rhododendron simsii HOM05D004265 ORTHO05D005175 1.9e-30 137.1 150 47.3
Pp3c8_19980 Physcomitrium patens HOM05D004265 ORTHO05D005175 7.2e-30 135.2 148 45.9
ClCG00G002440 Citrullus lanatus HOM05D004265 ORTHO05D005175 3.6e-29 132.9 172 54.1
ClCG02G014940 Citrullus lanatus HOM05D004265 ORTHO05D005175 3.6e-29 132.9 172 54.1
A09p19080 Brassica napus HOM05D004265 ORTHO05D005175 6.1e-29 132.1 156 53.2
Pp3c20_10160 Physcomitrium patens HOM05D004265 ORTHO05D005175 6.1e-29 132.1 172 41.9
SEGI_10604 Sequoiadendron giganteum HOM05D004265 ORTHO05D005175 2.3e-28 130.2 175 41.7
MELO3C004187.2 Cucumis melo HOM05D004265 ORTHO05D005175 3.0e-28 129.8 219 44.7
Solyc01g079460.2 Solanum lycopersicum HOM05D004265 ORTHO05D005175 1.4e-25 120.9 165 38.2
Sopen01g031230 Solanum pennellii HOM05D004265 ORTHO05D005175 1.4e-25 120.9 165 38.2
PGSC0003DMG400009008 Solanum tuberosum HOM05D004265 ORTHO05D005175 1.4e-25 120.9 165 38.2
Aa31LG2G11490 Aethionema arabicum HOM05D004265 ORTHO05D005175 1.8e-25 120.6 156 47.4
Lj2A1205T38 Lonicera japonica HOM05D004265 ORTHO05D005175 6.9e-25 118.6 152 42.1
CAN.G100.73 Capsicum annuum HOM05D004265 ORTHO05D005175 4.5e-24 115.9 165 37.6
Peaxi162Scf00691g00218 Petunia axillaris HOM05D004265 ORTHO05D005175 1.0e-23 114.8 165 37.6
Sed0005794 Sechium edule HOM05D004265 ORTHO05D005175 1.7e-23 114.0 167 37.7
GSVIVG01019978001 Vitis vinifera HOM05D000618 ORTHO05D000454 2.2e-23 113.6 165 40.0
arahy.Tifrunner.gnm1.ann1.K90Y16 Arachis hypogaea HOM05D004265 ORTHO05D005175 9.4e-22 108.2 151 42.4
arahy.Tifrunner.gnm1.ann1.7KQ9VF Arachis hypogaea HOM05D004265 ORTHO05D005175 1.2e-21 107.8 148 43.2
Dinv10100 Davidia involucrata HOM05D004265 ORTHO05D005175 1.6e-21 107.5 150 38.0
TAR362G0651 Trochodendron aralioides HOM05D004265 ORTHO05D005175 2.7e-21 106.7 120 62.5
Nitab4.5_0008277g0030 Nicotiana tabacum HOM05D004265 ORTHO05D005175 4.6e-21 105.9 165 35.2
Nitab4.5_0003540g0020 Nicotiana tabacum HOM05D004265 ORTHO05D005175 7.9e-21 105.1 153 35.9
TPR.G1662 Trifolium pratense HOM05D004265 ORTHO05D005175 3.9e-20 102.8 153 39.2
SalBow2G0857 Salvia bowleyana HOM05D004265 ORTHO05D005175 8.8e-20 101.7 147 37.4
Thecc.01G291900 Theobroma cacao HOM05D004265 ORTHO05D005175 5.9e-16 89.0 97 46.4
QL03p013641 Quercus lobata HOM05D004265 ORTHO05D005175 1.9e-14 84.0 76 59.2
DCAR_018300 Daucus carota HOM05D004265 ORTHO05D005175 7.9e-13 78.6 157 33.8
CDE05G2260 Ceratophyllum demersum HOM05D004265 ORTHO05D005175 1.4e-12 77.8 75 66.7
arahy.Tifrunner.gnm1.ann1.F5CMD4 Arachis hypogaea HOM05D004265 ORTHO05D005175 1.2e-08 64.7 148 29.1
CiPaw.14G122500 Carya illinoinensis HOM05D002542 ORTHO05D012505 1.6e-08 64.3 45 68.9
CiPaw.14G122400 Carya illinoinensis HOM05D004265 ORTHO05D005175 3.5e-08 63.2 45 68.9
Lsat_1_v5_gn_7_81020 Lactuca sativa HOM05D004265 ORTHO05D005175 1.1e-06 58.2 46 60.9


User provided reference genes

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