Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 3.7e-193 677.9 321 100.0
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 6.8e-155 550.8 303 85.1
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 6.8e-155 550.8 304 85.5
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 4.4e-154 548.1 300 86.0
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.7e-153 546.2 303 84.8
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 8.3e-153 543.9 302 85.4
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 8.3e-153 543.9 303 84.5
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 1.1e-152 543.5 304 83.9
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 4.1e-152 541.6 303 83.2
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 4.1e-152 541.6 301 84.1
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 7.1e-152 540.8 306 81.7
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 7.1e-152 540.8 305 83.6
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 9.2e-152 540.4 303 83.5
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 1.6e-151 539.7 303 82.8
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 2.7e-151 538.9 306 83.0
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 3.5e-151 538.5 303 82.5
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 4.6e-151 538.1 303 83.5
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 7.8e-151 537.3 303 82.8
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 1.7e-150 536.2 303 82.5
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 3.0e-150 535.4 303 82.2
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 3.0e-150 535.4 303 82.5
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 8.6e-150 533.9 303 82.2
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 1.9e-149 532.7 306 81.0
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 2.5e-149 532.3 304 81.9
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 2.5e-149 532.3 303 81.2
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 2.5e-149 532.3 303 82.5
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 3.3e-149 531.9 301 82.1
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 9.5e-149 530.4 303 81.8
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.6e-148 529.6 303 81.5
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 2.8e-148 528.9 313 79.6
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 3.6e-148 528.5 301 81.7
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 3.6e-148 528.5 305 81.3
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 8.1e-148 527.3 300 82.3
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 8.1e-148 527.3 317 78.5
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 8.1e-148 527.3 317 77.9
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 8.1e-148 527.3 317 78.5
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 8.1e-148 527.3 317 78.5
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 8.1e-148 527.3 303 80.9
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 1.4e-147 526.6 301 81.1
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 1.8e-147 526.2 303 80.5
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 5.2e-147 524.6 317 78.2
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 5.2e-147 524.6 317 78.2
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 8.9e-147 523.9 304 80.6
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 8.9e-147 523.9 303 81.2
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 1.2e-146 523.5 305 80.0
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 1.5e-146 523.1 302 80.8
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 2.6e-146 522.3 303 80.9
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 2.6e-146 522.3 304 78.9
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 1.3e-145 520.0 300 80.7
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 3.8e-145 518.5 314 79.6
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 4.2e-144 515.0 301 79.7
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 9.2e-144 513.8 306 77.5
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 1.6e-143 513.1 300 79.0
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 2.7e-143 512.3 301 79.1
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 1.7e-142 509.6 303 78.5
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 1.7e-142 509.6 301 78.4
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 3.0e-142 508.8 303 78.9
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 3.9e-142 508.4 303 77.6
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 3.9e-142 508.4 305 78.0
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 3.9e-142 508.4 310 77.7
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 8.7e-142 507.3 303 78.2
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 1.5e-141 506.5 303 78.2
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 3.3e-141 505.4 301 79.1
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 4.3e-141 505.0 305 77.4
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 9.6e-141 503.8 306 76.1
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 6.2e-140 501.1 306 77.1
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 6.2e-140 501.1 303 76.9
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 3.1e-139 498.8 303 75.9
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 5.3e-139 498.0 300 78.0
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 2.6e-138 495.7 303 76.9
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 2.6e-138 495.7 308 75.6
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 7.6e-138 494.2 308 75.0
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 9.9e-138 493.8 304 76.3
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 9.9e-138 493.8 343 71.1
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 1.3e-137 493.4 306 75.8
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 1.3e-137 493.4 306 75.8
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 7.1e-136 487.6 306 74.5
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 2.3e-134 482.6 301 75.7
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 1.1e-123 447.2 267 78.3
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 5.3e-123 444.9 255 82.0
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 6.4e-121 438.0 249 81.5
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 1.9e-120 436.4 307 70.4
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 7.1e-120 434.5 259 79.2
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.2e-119 433.7 268 76.5
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 2.3e-118 429.5 298 67.8
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 1.1e-117 427.2 266 78.9
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 1.1e-117 427.2 246 81.3
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 7.4e-117 424.5 246 80.9
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 2.1e-116 422.9 256 75.0
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 2.4e-115 419.5 296 64.9
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 5.3e-115 418.3 292 65.4
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 3.4e-114 415.6 255 74.9
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 6.5e-113 411.4 299 63.2
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 3.2e-112 409.1 246 77.6
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 3.7e-108 395.6 296 63.5
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 5.3e-107 391.7 231 80.1
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 1.3e-100 370.5 223 78.0
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 1.0e-97 360.9 208 80.3
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 4.7e-95 352.1 204 77.9
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 2.0e-93 346.7 229 72.1
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 9.7e-93 344.4 182 84.1
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 4.5e-90 335.5 260 64.2
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 6.1e-71 271.9 300 49.3
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 2.2e-68 263.5 176 69.9
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 4.1e-67 259.2 288 46.5
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 1.2e-58 231.1 184 62.5
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 2.0e-58 230.3 312 41.3
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 2.1e-55 220.3 141 75.2
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 2.8e-55 219.9 139 75.5
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.8e-55 219.9 186 60.2
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.7e-41 174.1 282 36.5
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.8e-39 166.8 103 77.7
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 4.7e-39 166.0 255 41.2
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 2.6e-37 160.2 143 58.0
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 3.4e-37 159.8 158 55.7
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.9e-32 144.1 283 32.9
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 3.8e-28 129.8 280 32.1
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.1e-27 128.3 162 42.6
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 5.8e-21 105.9 62 74.2
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.7e-17 94.4 51 78.4
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.7e-12 77.8 54 61.1
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 8.4e-12 75.5 62 61.3
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 3.2e-11 73.6 41 78.0
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 2.5e-08 63.9 42 69.0


User provided reference genes

Program Settings