Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025124 Daucus carota HOM05D000901 ORTHO05D004766 1.3e-134 483.0 240 100.0
DCAR_013892 Daucus carota HOM05D000901 ORTHO05D004766 7.8e-71 271.2 209 66.0
DCAR_013891 Daucus carota HOM05D000901 ORTHO05D004766 6.6e-70 268.1 209 65.1
Lj4A800T39 Lonicera japonica HOM05D000901 ORTHO05D004766 6.6e-70 268.1 217 59.4
Nitab4.5_0002730g0020 Nicotiana tabacum HOM05D000901 ORTHO05D004766 6.2e-68 261.5 223 57.8
CSS0010771 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 1.1e-67 260.8 224 57.6
Oeu048721.1 Olea europaea HOM05D000901 ORTHO05D004766 2.3e-67 259.6 197 62.9
Peaxi162Scf00064g00828 Petunia axillaris HOM05D000901 ORTHO05D004766 5.2e-67 258.5 213 57.7
Nitab4.5_0000498g0060 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.2e-66 257.3 213 59.2
CSS0047191 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 2.6e-66 256.1 216 58.3
CSS0049889 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 2.6e-66 256.1 216 58.3
Sopen12g031250 Solanum pennellii HOM05D000901 ORTHO05D004766 2.6e-66 256.1 222 58.1
EL10Ac1g02116 Beta vulgaris HOM05D000901 ORTHO05D004766 2.2e-65 253.1 198 59.1
PGSC0003DMG400029329 Solanum tuberosum HOM05D000901 ORTHO05D004766 2.2e-65 253.1 218 56.0
CAN.G1517.1 Capsicum annuum HOM05D000901 ORTHO05D004766 2.9e-65 252.7 196 61.2
PSO063G0231 Papaver somniferum HOM05D000901 ORTHO05D004766 6.4e-65 251.5 198 59.1
Hund05158 Selenicereus undatus HOM05D000901 ORTHO05D004766 6.4e-65 251.5 235 52.3
Hund05161 Selenicereus undatus HOM05D000901 ORTHO05D004766 6.4e-65 251.5 235 52.3
TAR381G0201 Trochodendron aralioides HOM05D000901 ORTHO05D004766 1.4e-64 250.4 225 53.8
Lj4A18T108 Lonicera japonica HOM05D000901 ORTHO05D004766 2.4e-64 249.6 207 61.4
HanXRQChr06g0184521 Helianthus annuus HOM05D000901 ORTHO05D004766 3.2e-64 249.2 219 57.1
AUR62036698 Chenopodium quinoa HOM05D000901 ORTHO05D004766 5.4e-64 248.4 213 55.4
PSO782G4846 Papaver somniferum HOM05D000901 ORTHO05D004766 7.1e-64 248.1 194 59.8
Nitab4.5_0001936g0050 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.2e-63 247.3 213 57.3
Sabra05G0189000 Salix brachista HOM05D000901 ORTHO05D004766 1.2e-63 247.3 221 56.1
Nn6g31933 Nelumbo nucifera HOM05D000901 ORTHO05D004766 1.6e-63 246.9 207 58.5
Peaxi162Scf00289g00084 Petunia axillaris HOM05D000901 ORTHO05D004766 2.7e-63 246.1 210 57.1
Manes.05G143600 Manihot esculenta HOM05D000901 ORTHO05D004766 3.5e-63 245.7 220 56.8
COL.COLO4_26098 Corchorus olitorius HOM05D000901 ORTHO05D004766 6.0e-63 245.0 198 60.6
TWI56G0802 Tripterygium wilfordii HOM05D000901 ORTHO05D004766 6.0e-63 245.0 206 56.8
Duzib041G0373 Durio zibethinus HOM05D000901 ORTHO05D004766 1.0e-62 244.2 203 58.6
vmacro04376 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 1.0e-62 244.2 206 57.3
Aqoxy5G01833 Aquilegia oxysepala HOM05D000901 ORTHO05D004766 1.3e-62 243.8 223 53.8
MBI05_g36763_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 1.3e-62 243.8 202 56.9
Ah.00g000720 Amaranthus hybridus HOM05D000901 ORTHO05D004766 1.7e-62 243.4 222 54.5
vmacro21856 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 1.7e-62 243.4 211 55.5
Thecc.08G049900 Theobroma cacao HOM05D000901 ORTHO05D004766 6.6e-62 241.5 198 60.1
HanXRQChr14g0429411 Helianthus annuus HOM05D000901 ORTHO05D004766 1.5e-61 240.4 218 56.4
Thecc.08G050000 Theobroma cacao HOM05D000901 ORTHO05D004766 1.5e-61 240.4 198 58.6
Potri.005G244400 Populus trichocarpa HOM05D000901 ORTHO05D004766 1.9e-61 240.0 211 55.9
GSVIVG01008758001 Vitis vinifera HOM05D000901 ORTHO05D004766 1.9e-61 240.0 214 56.5
arahy.Tifrunner.gnm1.ann1.774XMB Arachis hypogaea HOM05D000901 ORTHO05D004766 2.5e-61 239.6 238 49.2
PGR031G2145 Punica granatum HOM05D000901 ORTHO05D004766 2.5e-61 239.6 188 60.6
Cfa013996 Carpinus fangiana HOM05D000901 ORTHO05D004766 3.3e-61 239.2 203 56.7
ECA238G3494 Erigeron canadensis HOM05D000901 ORTHO05D004766 3.3e-61 239.2 194 60.3
MSTRG.1154 Avicennia marina HOM05D000901 ORTHO05D004766 4.3e-61 238.8 218 54.6
Sopen12g031260 Solanum pennellii HOM05D000901 ORTHO05D004766 4.3e-61 238.8 205 57.1
Gorai.010G001700 Gossypium raimondii HOM05D000901 ORTHO05D004766 5.6e-61 238.4 205 57.6
AUR62013896 Chenopodium quinoa HOM05D000901 ORTHO05D004766 7.3e-61 238.0 219 52.1
SGA_v2.0_scaffold145G36086 Striga asiatica HOM05D000901 ORTHO05D004766 7.3e-61 238.0 209 56.5
Glyma.04G021400 Glycine max HOM05D000901 ORTHO05D004766 9.6e-61 237.7 234 53.4
Lsat_1_v5_gn_2_7381 Lactuca sativa HOM05D000901 ORTHO05D004766 1.2e-60 237.3 228 54.4
Hund01706 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.2e-60 237.3 211 55.0
Hund05157 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.2e-60 237.3 235 51.1
Hund05162 Selenicereus undatus HOM05D000901 ORTHO05D004766 1.2e-60 237.3 235 51.1
Solyc12g094380.2 Solanum lycopersicum HOM05D000901 ORTHO05D004766 2.1e-60 236.5 205 56.1
MSTRG.1155 Avicennia marina HOM05D000901 ORTHO05D004766 2.8e-60 236.1 218 53.7
arahy.Tifrunner.gnm1.ann1.K685T3 Arachis hypogaea HOM05D000901 ORTHO05D004766 4.7e-60 235.3 223 51.1
Migut.C00891 Erythranthe guttata HOM05D000901 ORTHO05D004766 4.7e-60 235.3 215 52.1
Ciclev10002332m.g Citrus clementina HOM05D000901 ORTHO05D004766 6.2e-60 235.0 230 51.3
HPP92_025437 Vanilla planifolia HOM05D000901 ORTHO05D004766 1.4e-59 233.8 215 52.1
Sc15g0004710 Simmondsia chinensis HOM05D000901 ORTHO05D004766 3.1e-59 232.6 223 51.1
Lalb_Chr11g0061781 Lupinus albus HOM05D000901 ORTHO05D004766 4.0e-59 232.3 221 52.0
Eucgr.F03719 Eucalyptus grandis HOM05D000901 ORTHO05D004766 5.2e-59 231.9 197 55.8
Actinidia37946 Actinidia chinensis HOM05D000901 ORTHO05D004766 8.9e-59 231.1 203 53.7
CiPaw.07G144500 Carya illinoinensis HOM05D000901 ORTHO05D004766 8.9e-59 231.1 198 56.1
Cpa.g.sc26.277 Carica papaya HOM05D000901 ORTHO05D004766 1.2e-58 230.7 233 49.8
Eucgr.F01691 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.2e-58 230.7 202 55.4
MD08G1008700 Malus domestica HOM05D000901 ORTHO05D004766 1.2e-58 230.7 219 53.4
SalBow7G4280 Salvia bowleyana HOM05D000901 ORTHO05D004766 1.5e-58 230.3 207 54.1
Glyma.04G021300 Glycine max HOM05D000901 ORTHO05D004766 2.0e-58 229.9 231 51.1
Nn5g30828 Nelumbo nucifera HOM05D000901 ORTHO05D004766 3.4e-58 229.2 225 50.7
Phvul.009G019200 Phaseolus vulgaris HOM05D000901 ORTHO05D004766 7.6e-58 228.0 222 52.3
PGR083G1908 Punica granatum HOM05D000901 ORTHO05D004766 7.6e-58 228.0 205 54.1
Cc10_g01220 Coffea canephora HOM05D000901 ORTHO05D004766 9.9e-58 227.6 197 56.9
Lj1g0003310 Lotus japonicus HOM05D000901 ORTHO05D004766 1.3e-57 227.3 232 50.0
Sp5g31130 Schrenkiella parvula HOM05D000901 ORTHO05D004766 1.7e-57 226.9 222 51.4
Gohir.A06G001500 Gossypium hirsutum HOM05D000901 ORTHO05D004766 2.9e-57 226.1 182 60.4
MD15G1007500 Malus domestica HOM05D000901 ORTHO05D004766 2.9e-57 226.1 212 51.9
ClCG08G014120 Citrullus lanatus HOM05D000901 ORTHO05D004766 3.8e-57 225.7 193 56.0
FvH4_2g38030 Fragaria vesca HOM05D000901 ORTHO05D004766 4.9e-57 225.3 210 54.8
RcHm_v2.0_Chr6g0303571 Rosa chinensis HOM05D000901 ORTHO05D004766 6.4e-57 224.9 208 54.8
Thhalv10019591m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 8.4e-57 224.6 211 51.7
BcaC03g15640 Brassica carinata HOM05D000901 ORTHO05D004766 1.1e-56 224.2 215 50.2
Medtr0332s0020 Medicago truncatula HOM05D000901 ORTHO05D004766 1.1e-56 224.2 218 51.4
Sed0006708 Sechium edule HOM05D000901 ORTHO05D004766 3.2e-56 222.6 229 50.7
TPR.G9568 Trifolium pratense HOM05D000901 ORTHO05D004766 4.2e-56 222.2 227 50.7
BolC2t09354H Brassica oleracea HOM05D000901 ORTHO05D004766 5.4e-56 221.9 217 49.3
FAN20G3106 Fragaria x ananassa HOM05D000901 ORTHO05D004766 5.4e-56 221.9 214 52.8
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 5.4e-56 221.9 220 51.4
Zm00001eb103900 Zea mays HOM05D000901 ORTHO05D004766 7.1e-56 221.5 200 52.5
Aa31LG4G6150 Aethionema arabicum HOM05D000901 ORTHO05D004766 9.3e-56 221.1 207 52.2
Potri.002G017500 Populus trichocarpa HOM05D000901 ORTHO05D004766 9.3e-56 221.1 191 56.0
HPP92_022203 Vanilla planifolia HOM05D000901 ORTHO05D004766 9.3e-56 221.1 216 52.3
C02p33510 Brassica napus HOM05D000901 ORTHO05D004766 1.2e-55 220.7 217 49.3
SEGI_34166 Sequoiadendron giganteum HOM05D000901 ORTHO05D004766 1.6e-55 220.3 214 51.4
BraA02t07071Z Brassica rapa HOM05D000901 ORTHO05D004766 2.1e-55 219.9 196 53.6
CsaV3_2G024310 Cucumis sativus L. HOM05D000901 ORTHO05D004766 2.1e-55 219.9 196 54.1
Prupe.1G360400 Prunus persica HOM05D000901 ORTHO05D004766 2.1e-55 219.9 217 49.3
CANSAT25G0446 Cannabis sativa HOM05D000901 ORTHO05D004766 2.7e-55 219.5 218 50.5
A02p20390 Brassica napus HOM05D000901 ORTHO05D004766 3.5e-55 219.2 224 49.6
AT1G76020 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 6.0e-55 218.4 214 50.9
MELO3C011351.2 Cucumis melo HOM05D000901 ORTHO05D004766 6.0e-55 218.4 195 53.3
ATR0661G262 Amborella trichopoda HOM05D000901 ORTHO05D004766 1.0e-54 217.6 194 54.1
Os09g0542200 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 2.3e-54 216.5 199 51.8
Sp1g17990 Schrenkiella parvula HOM05D000901 ORTHO05D004766 6.6e-54 214.9 218 48.6
Carub.0002s2290 Capsella rubella HOM05D000901 ORTHO05D004766 8.7e-54 214.5 211 50.2
Ca_11598_v3 Cicer arietinum L. HOM05D000901 ORTHO05D004766 8.7e-54 214.5 197 51.8
CDE09G0289 Ceratophyllum demersum HOM05D000901 ORTHO05D004766 1.5e-53 213.8 218 53.7
HPP92_026881 Vanilla planifolia HOM05D000901 ORTHO05D004766 4.3e-53 212.2 220 49.1
AL1G33070 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 7.3e-53 211.5 218 48.6
THA.LOC104813773 Tarenaya hassleriana HOM05D000901 ORTHO05D004766 1.3e-52 210.7 211 50.7
QL02p012636 Quercus lobata HOM05D000901 ORTHO05D004766 1.6e-52 210.3 218 49.5
Carub.0001s1975 Capsella rubella HOM05D000901 ORTHO05D004766 2.8e-52 209.5 217 48.4
Os04g0227500 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 4.8e-52 208.8 198 52.0
AT1G20225 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 1.1e-51 207.6 223 47.5
unitig_32.g11240 Utricularia gibba HOM05D000901 ORTHO05D004766 1.4e-51 207.2 209 50.7
BcaB07g32030 Brassica carinata HOM05D000901 ORTHO05D004766 1.8e-51 206.8 213 49.8
BolC5t30582H Brassica oleracea HOM05D000901 ORTHO05D004766 2.4e-51 206.5 213 49.3
HPP92_003483 Vanilla planifolia HOM05D000901 ORTHO05D004766 2.4e-51 206.5 220 47.7
BcaC05g25925 Brassica carinata HOM05D000901 ORTHO05D004766 4.0e-51 205.7 205 50.2
BraA06t24738Z Brassica rapa HOM05D000901 ORTHO05D004766 4.0e-51 205.7 213 48.8
CARHR020720 Cardamine hirsuta HOM05D000901 ORTHO05D004766 4.0e-51 205.7 218 47.2
C05p18770 Brassica napus HOM05D000901 ORTHO05D004766 5.3e-51 205.3 213 48.8
CARHR069550 Cardamine hirsuta HOM05D000901 ORTHO05D004766 5.3e-51 205.3 209 49.8
A06p16340 Brassica napus HOM05D000901 ORTHO05D004766 6.9e-51 204.9 219 47.0
Psat7g082200 Pisum sativum HOM05D000901 ORTHO05D004766 9.0e-51 204.5 214 49.5
A07p41510 Brassica napus HOM05D000901 ORTHO05D004766 3.4e-50 202.6 214 49.1
C06p49920 Brassica napus HOM05D000901 ORTHO05D004766 1.7e-49 200.3 214 47.7
AL2G36040 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 2.2e-49 199.9 244 43.9
BcaC08g47306 Brassica carinata HOM05D000901 ORTHO05D004766 1.1e-48 197.6 214 47.7
BcaC08g47307 Brassica carinata HOM05D000901 ORTHO05D004766 1.1e-48 197.6 214 47.7
Nitab4.5_0010135g0010 Nicotiana tabacum HOM05D000901 ORTHO05D004766 5.4e-48 195.3 212 48.6
BcaC08g47093 Brassica carinata HOM05D000901 ORTHO05D004766 4.6e-47 192.2 210 47.1
Aa31LG7G4620 Aethionema arabicum HOM05D000901 ORTHO05D004766 5.1e-46 188.7 232 44.4
BraA07t31683Z Brassica rapa HOM05D000901 ORTHO05D004766 5.1e-46 188.7 233 43.3
BolC6t40030H Brassica oleracea HOM05D000901 ORTHO05D004766 1.1e-45 187.6 232 44.0
SGA_v2.0_scaffold292G47381 Striga asiatica HOM05D000901 ORTHO05D004766 5.6e-45 185.3 214 47.2
SMO137G0357 Selaginella moellendorffii HOM05D000901 ORTHO05D004766 7.4e-45 184.9 212 47.2
Rhsim07G0249300 Rhododendron simsii HOM05D000901 ORTHO05D004766 1.4e-43 180.6 202 49.0
Rhsim06G0013400 Rhododendron simsii HOM05D000901 ORTHO05D004766 4.0e-43 179.1 153 56.9
Dinv31885 Davidia involucrata HOM05D000901 ORTHO05D001160 9.0e-43 177.9 127 65.4
Pp3c23_11410 Physcomitrium patens HOM05D000901 ORTHO05D004766 1.5e-42 177.2 211 44.1
FAN27G1122 Fragaria x ananassa HOM05D000901 ORTHO05D001160 5.5e-40 168.7 174 52.3
MBI05_g08641_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 7.1e-40 168.3 141 56.0
Mapoly0103s0033 Marchantia polymorpha HOM05D000901 ORTHO05D004766 8.7e-38 161.4 222 39.6
Psat7g082240 Pisum sativum HOM05D000901 ORTHO05D004766 5.6e-37 158.7 134 54.5
Thhalv10010046m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 4.8e-36 155.6 166 48.2
Actinidia29763 Actinidia chinensis HOM05D000901 ORTHO05D004766 3.1e-35 152.9 204 42.2
Oeu048720.1 Olea europaea HOM05D000901 ORTHO05D004766 1.3e-30 137.5 102 64.7
Zm00001eb419520 Zea mays HOM05D000901 ORTHO05D004766 6.7e-30 135.2 138 47.8
MBI05_g19938_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 4.3e-29 132.5 113 54.0
Lj2g0002110 Lotus japonicus HOM05D000901 ORTHO05D004766 4.8e-28 129.0 142 49.3
MSTRG.25272 Avicennia marina HOM05D000901 ORTHO05D004766 1.2e-26 124.4 112 57.1
AagrBONN_evm.TU.Sc2ySwM_228.1931 Anthoceros agrestis HOM05D000901 ORTHO05D004766 1.0e-25 121.3 178 38.2
Haze_22688 Corylus avellana HOM05D000901 ORTHO05D004766 5.0e-25 119.0 108 50.9
BolC1t01801H Brassica oleracea HOM05D000901 ORTHO05D004766 1.4e-24 117.5 109 53.2
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 1.9e-24 117.1 114 46.5
MBI05_g47803_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 9.3e-24 114.8 148 41.2
FAN15G2950 Fragaria x ananassa HOM05D000901 ORTHO05D001160 3.6e-23 112.8 174 40.8
CBR_g10910 Chara braunii HOM05D000901 ORTHO05D004766 3.9e-22 109.4 212 31.1
AUR62036699 Chenopodium quinoa HOM05D000901 ORTHO05D004766 1.1e-21 107.8 106 47.2
Eucgr.L01283 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.9e-21 107.1 92 53.3
C03p50790 Brassica napus HOM05D000901 ORTHO05D004766 4.3e-21 105.9 111 45.9
BcaC01g02788 Brassica carinata HOM05D000901 ORTHO05D004766 5.7e-21 105.5 111 45.9
BolC6t40031H Brassica oleracea HOM05D000901 ORTHO05D004766 7.7e-18 95.1 128 39.1
C07p15020 Brassica napus HOM05D000901 ORTHO05D004766 2.2e-17 93.6 102 45.1
CiPaw.07G144400 Carya illinoinensis HOM05D000901 ORTHO05D004766 1.1e-16 91.3 84 52.4
BcaC09g50963 Brassica carinata HOM05D000901 ORTHO05D004766 9.4e-16 88.2 104 47.1
BolC6t37476H Brassica oleracea HOM05D000901 ORTHO05D004766 3.9e-14 82.8 92 41.3
C03p60410 Brassica napus HOM05D000901 ORTHO05D004766 1.3e-12 77.8 86 43.0
Rhsim07G0249200 Rhododendron simsii HOM05D000901 ORTHO05D004766 8.2e-12 75.1 67 58.2
Haze_22689 Corylus avellana HOM05D000901 ORTHO05D004766 3.1e-11 73.2 128 39.1
Ciclev10027478m.g Citrus clementina HOM05D000901 ORTHO05D004766 5.3e-11 72.4 85 44.7
BcaC09g50962 Brassica carinata HOM05D000901 ORTHO05D004766 2.6e-10 70.1 55 50.9
BolC3t18302H Brassica oleracea HOM05D000901 ORTHO05D004766 3.4e-10 69.7 76 42.1
Eucgr.H01097 Eucalyptus grandis HOM05D000901 ORTHO05D004766 4.7e-07 59.3 68 45.6


User provided reference genes

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