Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 4.2e-253 877.5 426 100.0
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 8.7e-166 587.4 390 72.1
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 9.7e-165 583.9 448 65.4
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 1.4e-160 570.1 470 61.9
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 7.9e-159 564.3 447 61.7
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.8e-158 563.1 444 64.2
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 8.8e-158 560.8 444 64.0
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 1.1e-157 560.5 452 63.3
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 2.5e-157 559.3 446 63.7
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 1.3e-156 557.0 446 63.0
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 3.1e-155 552.4 392 67.6
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 1.2e-154 550.4 447 61.5
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 1.2e-154 550.4 449 61.5
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 2.0e-154 549.7 447 61.5
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 2.6e-154 549.3 447 61.1
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 1.1e-152 543.9 390 66.7
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 1.4e-152 543.5 451 60.8
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 1.4e-152 543.5 447 61.3
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 4.2e-152 542.0 393 66.4
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 3.6e-151 538.9 446 61.2
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 3.6e-151 538.9 445 62.0
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 3.6e-151 538.9 392 66.6
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 6.1e-151 538.1 440 60.5
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 7.9e-151 537.7 446 61.2
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 1.8e-150 536.6 447 59.7
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 5.1e-150 535.0 449 60.6
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 2.0e-149 533.1 445 60.0
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 2.6e-149 532.7 446 61.7
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.3e-149 532.3 448 60.5
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 4.4e-149 531.9 441 59.6
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 5.7e-149 531.6 445 59.8
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 5.7e-149 531.6 445 61.3
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 5.7e-149 531.6 449 61.0
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 1.7e-148 530.0 446 60.3
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.7e-148 530.0 448 60.3
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.7e-148 528.9 448 60.3
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 3.7e-148 528.9 479 57.0
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 3.7e-148 528.9 450 61.6
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 4.8e-148 528.5 443 59.1
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 6.3e-148 528.1 449 58.6
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 8.2e-148 527.7 446 61.2
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.1e-147 527.3 448 60.7
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 1.1e-147 527.3 442 59.7
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 1.1e-147 527.3 447 60.4
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 1.8e-147 526.6 448 60.0
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 1.8e-147 526.6 446 60.5
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 1.8e-147 526.6 392 66.3
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 2.4e-147 526.2 447 60.2
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.3e-147 525.0 446 60.1
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 2.6e-146 522.7 467 57.6
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 4.5e-146 521.9 461 59.0
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 1.3e-145 520.4 445 58.0
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 1.3e-145 520.4 446 58.5
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 1.7e-145 520.0 443 59.1
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 5.0e-145 518.5 443 59.4
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 8.5e-145 517.7 440 58.6
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.1e-144 517.3 448 58.3
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 1.4e-144 516.9 453 58.7
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 2.5e-144 516.2 447 57.7
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 2.5e-144 516.2 451 57.9
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 1.2e-143 513.8 448 57.8
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 2.1e-143 513.1 449 57.0
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 4.7e-143 511.9 445 57.8
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 4.7e-143 511.9 393 62.1
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 1.0e-142 510.8 452 56.6
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 1.4e-142 510.4 447 58.2
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.4e-142 510.4 496 54.6
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 2.3e-142 509.6 377 65.5
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 4.4e-141 505.4 389 64.0
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 7.4e-141 504.6 442 56.8
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 2.8e-140 502.7 485 54.6
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 4.8e-140 501.9 460 57.2
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 1.1e-139 500.7 447 55.9
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 1.4e-139 500.4 443 56.0
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 3.1e-139 499.2 448 56.5
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 7.0e-139 498.0 446 56.3
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 7.0e-139 498.0 446 56.3
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 9.1e-139 497.7 441 56.9
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 5.9e-138 495.0 442 56.1
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 2.2e-137 493.0 480 53.5
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 6.5e-137 491.5 450 55.1
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 3.2e-136 489.2 446 55.2
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 1.4e-134 483.8 450 57.1
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 4.0e-134 482.3 449 54.8
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 1.7e-132 476.9 444 55.9
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 9.1e-131 471.1 391 58.8
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 3.2e-128 462.6 435 56.8
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 3.6e-127 459.1 446 53.8
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 3.6e-127 459.1 390 56.7
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 2.0e-125 453.4 393 58.5
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 3.4e-125 452.6 441 53.5
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 2.2e-124 449.9 392 58.4
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 3.5e-122 442.6 400 56.8
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 2.3e-121 439.9 641 40.7
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 2.5e-120 436.4 440 52.3
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 2.0e-117 426.8 277 73.6
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 9.5e-112 407.9 354 58.2
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 3.6e-87 326.2 258 62.8
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 1.3e-81 307.8 209 71.3
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 1.5e-72 277.7 198 67.2
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 1.7e-68 264.2 487 35.7
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 2.4e-67 260.4 243 51.0
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 4.3e-64 249.6 240 53.8
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 2.4e-62 243.8 178 65.7
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 4.5e-61 239.6 238 52.1
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.2e-58 231.5 238 50.0
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 1.0e-57 228.4 238 52.1
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 2.8e-55 220.3 525 32.2
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 2.4e-54 217.2 557 28.7
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 7.4e-48 195.7 457 30.6
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 1.1e-35 155.2 108 71.3
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 3.0e-33 147.1 361 29.6
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 2.6e-32 144.1 184 43.5
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 6.7e-25 119.4 91 57.1
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 2.0e-24 117.9 88 58.0
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 8.2e-23 112.5 107 48.6
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 2.9e-20 104.0 59 74.6
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.4e-17 95.1 58 70.7
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 2.8e-15 87.4 155 32.9
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 1.6e-10 71.6 183 30.6
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 5.2e-09 66.6 41 70.7
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 2.0e-08 64.7 56 55.4
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 2.6e-08 64.3 79 48.1
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 2.2e-07 61.2 43 62.8
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 6.3e-07 59.7 49 49.0


User provided reference genes

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