Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 1.5e-47 192.6 105 100.0
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 1.7e-22 109.4 106 66.0
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 3.6e-20 101.7 95 64.2
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 6.1e-20 100.9 104 61.5
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.0e-19 100.1 93 65.6
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.4e-19 99.8 112 58.0
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.4e-19 99.8 108 59.3
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.4e-19 99.8 108 57.4
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.4e-19 99.8 108 57.4
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 3.0e-19 98.6 95 63.2
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 4.0e-19 98.2 109 59.6
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 5.2e-19 97.8 104 60.6
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 6.8e-19 97.4 94 62.8
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 8.8e-19 97.1 95 62.1
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 1.5e-18 96.3 95 61.1
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.5e-18 96.3 95 63.2
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 1.5e-18 96.3 95 62.1
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 2.6e-18 95.5 95 62.1
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 2.6e-18 95.5 95 63.2
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 3.4e-18 95.1 106 58.5
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 3.4e-18 95.1 108 59.3
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 4.4e-18 94.7 95 60.0
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 4.4e-18 94.7 95 60.0
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 4.4e-18 94.7 104 58.7
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 4.4e-18 94.7 104 58.7
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 5.7e-18 94.4 95 60.0
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 5.7e-18 94.4 94 61.7
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 7.5e-18 94.0 92 62.0
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 9.8e-18 93.6 94 60.6
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 1.3e-17 93.2 95 60.0
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 1.3e-17 93.2 95 60.0
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.3e-17 93.2 95 62.1
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 1.3e-17 93.2 95 62.1
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 1.3e-17 93.2 95 60.0
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 1.3e-17 93.2 106 56.6
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.3e-17 93.2 95 60.0
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 1.7e-17 92.8 107 56.1
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 1.7e-17 92.8 95 58.9
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 2.2e-17 92.4 94 60.6
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 2.8e-17 92.0 108 55.6
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 3.7e-17 91.7 94 59.6
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 3.7e-17 91.7 94 61.7
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.7e-17 91.7 94 59.6
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.7e-17 91.7 94 59.6
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 3.7e-17 91.7 106 55.7
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 4.8e-17 91.3 95 56.8
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 4.8e-17 91.3 95 60.0
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 6.3e-17 90.9 95 57.9
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 6.3e-17 90.9 95 57.9
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 8.3e-17 90.5 95 57.9
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 8.3e-17 90.5 95 57.9
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 8.3e-17 90.5 95 61.1
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 1.1e-16 90.1 95 57.9
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 1.1e-16 90.1 106 55.7
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 1.4e-16 89.7 106 55.7
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 1.4e-16 89.7 106 55.7
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 1.8e-16 89.4 108 53.7
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 1.8e-16 89.4 95 57.9
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 2.4e-16 89.0 95 60.0
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 2.4e-16 89.0 94 57.4
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 3.1e-16 88.6 106 54.7
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 3.1e-16 88.6 106 54.7
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 3.1e-16 88.6 95 56.8
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 3.1e-16 88.6 91 59.3
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 4.1e-16 88.2 92 59.8
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 4.1e-16 88.2 95 55.8
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 5.4e-16 87.8 112 50.0
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 5.4e-16 87.8 112 50.0
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 5.4e-16 87.8 95 55.8
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 7.0e-16 87.4 95 56.8
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 7.0e-16 87.4 108 52.8
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 9.1e-16 87.0 95 56.8
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 9.1e-16 87.0 95 55.8
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 9.1e-16 87.0 95 56.8
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 1.2e-15 86.7 106 53.8
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 1.6e-15 86.3 98 57.1
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 2.0e-15 85.9 95 55.8
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 2.7e-15 85.5 107 53.3
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 2.7e-15 85.5 107 53.3
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 4.5e-15 84.7 108 50.9
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 4.5e-15 84.7 108 50.9
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 4.5e-15 84.7 108 50.9
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 4.5e-15 84.7 95 58.9
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 5.9e-15 84.3 107 50.5
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 5.9e-15 84.3 95 55.8
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 2.2e-14 82.4 89 59.6
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 3.8e-14 81.6 88 56.8
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 5.0e-14 81.3 94 52.1
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 6.5e-14 80.9 112 46.4
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.1e-13 80.1 95 54.7
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 3.6e-12 75.1 95 53.7
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 8.0e-12 73.9 94 52.1
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 1.0e-11 73.6 107 46.7
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 2.3e-11 72.4 89 55.1
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 7.5e-10 67.4 91 50.5
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.3e-09 66.6 96 49.0
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 2.2e-09 65.9 89 49.4
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 2.2e-09 65.9 71 53.5
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 2.8e-09 65.5 91 50.5
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 2.8e-09 65.5 55 67.3
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 8.3e-09 63.9 89 47.2
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 4.5e-07 58.2 59 55.9
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 5.9e-07 57.8 66 50.0
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.0e-06 54.7 89 44.9


User provided reference genes

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