Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 7.2e-68 260.4 125 100.0
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 1.0e-50 203.4 121 80.2
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 5.2e-50 201.1 120 79.2
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 6.7e-50 200.7 121 78.5
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 1.5e-49 199.5 121 78.5
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 4.4e-49 198.0 121 77.7
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 5.7e-49 197.6 122 77.0
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 7.5e-49 197.2 120 79.2
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 1.7e-48 196.1 122 76.2
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 4.8e-48 194.5 122 78.7
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 6.3e-48 194.1 120 76.7
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 1.4e-47 193.0 126 74.6
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 1.8e-47 192.6 122 77.9
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 3.1e-47 191.8 120 77.5
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 5.3e-47 191.0 126 73.0
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 9.1e-47 190.3 121 75.2
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 9.1e-47 190.3 120 75.8
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 1.2e-46 189.9 120 76.7
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 1.2e-46 189.9 121 76.0
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 2.0e-46 189.1 120 75.8
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.7e-46 188.7 120 75.8
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 2.7e-46 188.7 120 75.8
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 4.5e-46 188.0 121 73.6
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 5.9e-46 187.6 121 74.4
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 5.9e-46 187.6 121 72.7
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 5.9e-46 187.6 134 69.4
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 7.7e-46 187.2 121 74.4
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 7.7e-46 187.2 120 75.0
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 1.0e-45 186.8 136 68.4
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 1.3e-45 186.4 120 72.5
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 1.3e-45 186.4 120 72.5
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 1.3e-45 186.4 121 72.7
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 2.2e-45 185.7 120 73.3
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 2.9e-45 185.3 121 74.4
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 2.9e-45 185.3 121 74.4
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 3.8e-45 184.9 121 74.4
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 5.0e-45 184.5 121 71.1
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 6.5e-45 184.1 121 71.1
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 6.5e-45 184.1 120 72.5
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 8.5e-45 183.7 121 73.6
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 8.5e-45 183.7 121 73.6
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 8.5e-45 183.7 121 73.6
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 1.1e-44 183.3 121 73.6
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 1.9e-44 182.6 121 71.1
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 2.5e-44 182.2 121 71.9
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 4.2e-44 181.4 121 71.1
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 4.2e-44 181.4 121 69.4
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 5.5e-44 181.0 121 71.1
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 7.2e-44 180.6 122 71.3
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 1.2e-43 179.9 121 71.9
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 1.2e-43 179.9 120 70.8
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 2.1e-43 179.1 120 70.0
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 2.7e-43 178.7 121 71.1
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 4.7e-43 177.9 115 75.7
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 4.7e-43 177.9 122 70.5
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 1.0e-42 176.8 120 69.2
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 1.0e-42 176.8 120 69.2
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 1.4e-42 176.4 121 72.7
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 1.4e-42 176.4 121 69.4
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 2.3e-42 175.6 120 70.8
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 3.0e-42 175.3 121 69.4
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 5.2e-42 174.5 120 71.7
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 8.8e-42 173.7 120 68.3
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 2.0e-41 172.6 120 69.2
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 2.6e-41 172.2 121 67.8
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 3.4e-41 171.8 120 67.5
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 4.4e-41 171.4 120 68.3
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 5.7e-41 171.0 127 66.1
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 9.8e-41 170.2 120 66.7
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 2.2e-40 169.1 150 59.3
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 2.2e-40 169.1 179 51.4
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 2.8e-40 168.7 120 67.5
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 6.3e-40 167.5 120 69.2
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 7.0e-39 164.1 144 61.1
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 7.0e-39 164.1 100 79.0
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 9.1e-39 163.7 120 68.3
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 2.7e-38 162.2 120 61.7
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 4.5e-38 161.4 121 65.3
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 3.8e-37 158.3 121 65.3
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 4.2e-36 154.8 150 55.3
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 2.8e-35 152.1 118 60.2
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 3.0e-34 148.7 131 60.3
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 3.7e-32 141.7 125 59.2
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 1.5e-28 129.8 88 70.5
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 1.9e-28 129.4 75 77.3
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 1.9e-28 129.4 86 70.9
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 5.6e-28 127.9 85 72.9
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 7.3e-28 127.5 75 78.7
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 2.1e-27 125.9 75 78.7
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 1.0e-26 123.6 85 68.2
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 3.0e-26 122.1 100 60.0
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 3.4e-25 118.6 75 70.7
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 1.3e-24 116.7 76 69.7
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 5.4e-23 111.3 114 52.6
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 2.3e-21 105.9 75 68.0
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 2.8e-19 99.0 75 64.0
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 8.0e-19 97.4 119 47.9
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 1.3e-16 90.1 123 40.7
FAN25G3667 Fragaria x ananassa HOM05D007052 ORTHO05D008871 3.9e-13 78.6 40 87.5
RcHm_v2.0_Chr5g0002331 Rosa chinensis HOM05D007052 ORTHO05D008871 6.6e-13 77.8 45 77.8
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 2.5e-12 75.9 121 38.8
MCO13G382 Micromonas commoda HOM05D007052 ORTHO05D008871 1.1e-10 70.5 161 31.7
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 4.0e-10 68.6 121 33.9
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 6.8e-10 67.8 36 83.3
Nitab4.5_0007209g0010 Nicotiana tabacum HOM05D007052 ORTHO05D008871 8.9e-10 67.4 39 74.4
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 1.2e-09 67.0 42 71.4
PRCOL_00003373 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 1.1e-07 60.5 125 31.2
PRCOL_00004464 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 1.4e-07 60.1 119 27.7


User provided reference genes

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