Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 3.3e-207 724.9 396 100.0
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 4.1e-178 628.2 386 87.8
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 3.3e-167 592.0 370 84.3
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 6.2e-166 587.8 374 82.1
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 5.8e-164 581.3 379 82.6
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.3e-163 580.1 371 80.9
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.4e-162 575.9 386 80.6
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 6.0e-161 571.2 370 81.6
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.3e-160 569.3 383 78.3
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 3.9e-160 568.5 371 81.7
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 6.7e-160 567.8 368 81.8
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.5e-159 566.6 387 78.0
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 1.5e-159 566.6 317 88.0
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.9e-159 566.2 382 78.0
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.9e-159 566.2 376 75.3
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 2.5e-159 565.8 372 78.8
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 3.3e-159 565.5 374 79.9
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 4.3e-159 565.1 382 77.7
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.3e-159 565.1 376 75.5
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 5.6e-159 564.7 374 80.2
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 7.4e-159 564.3 380 78.2
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.3e-158 563.5 367 76.0
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.3e-158 563.5 382 77.7
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 2.8e-158 562.4 373 76.7
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 2.8e-158 562.4 380 77.4
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 4.8e-158 561.6 369 80.8
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.8e-158 561.6 398 75.9
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 4.8e-158 561.6 377 75.9
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 6.2e-158 561.2 378 81.0
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 6.2e-158 561.2 368 79.9
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.2e-158 561.2 368 79.9
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 8.1e-158 560.8 386 74.9
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 1.4e-157 560.1 374 79.7
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.8e-157 559.7 368 80.2
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 2.4e-157 559.3 384 78.9
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.1e-157 558.9 368 80.2
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 5.3e-157 558.1 394 76.1
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 5.3e-157 558.1 379 72.6
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 5.3e-157 558.1 368 79.9
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 9.0e-157 557.4 369 78.9
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 9.0e-157 557.4 369 79.1
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 9.0e-157 557.4 368 78.8
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 9.0e-157 557.4 381 78.2
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.2e-156 557.0 379 72.6
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 1.2e-156 557.0 371 79.2
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 2.6e-156 555.8 380 71.6
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 3.4e-156 555.4 398 74.9
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 9.9e-156 553.9 363 81.0
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 9.9e-156 553.9 378 75.4
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 9.9e-156 553.9 375 77.9
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 9.9e-156 553.9 375 77.9
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 1.7e-155 553.1 363 78.2
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.7e-155 553.1 374 77.5
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 2.9e-155 552.4 362 78.7
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 2.9e-155 552.4 361 76.7
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 4.9e-155 551.6 362 78.5
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 6.4e-155 551.2 377 80.6
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 8.4e-155 550.8 373 76.9
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.1e-154 550.4 384 71.9
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 1.9e-154 549.7 378 72.8
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 2.4e-154 549.3 373 71.6
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 4.2e-154 548.5 368 73.9
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 7.1e-154 547.7 367 80.1
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 9.3e-154 547.4 363 76.6
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 1.6e-153 546.6 363 76.3
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 1.6e-153 546.6 373 73.5
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 2.1e-153 546.2 365 79.7
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 2.1e-153 546.2 366 76.8
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 2.1e-153 546.2 373 73.2
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.7e-153 545.8 384 72.9
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.5e-153 545.4 372 72.8
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 7.9e-153 544.3 327 81.7
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 1.0e-152 543.9 365 80.3
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 1.8e-152 543.1 381 77.4
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.8e-152 543.1 383 77.0
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.8e-152 543.1 372 74.2
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 3.0e-152 542.3 364 79.7
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 3.0e-152 542.3 351 80.6
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.5e-151 540.0 361 75.6
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.9e-151 539.7 379 73.4
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 3.3e-151 538.9 393 69.5
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 4.3e-151 538.5 372 78.2
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 7.4e-151 537.7 366 77.3
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 1.6e-150 536.6 385 76.9
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 1.6e-150 536.6 385 76.9
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 8.2e-150 534.3 368 77.2
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 8.2e-150 534.3 366 73.0
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.4e-149 533.5 368 76.9
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 3.1e-149 532.3 368 73.1
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 4.0e-149 531.9 368 78.5
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 9.0e-149 530.8 382 77.0
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.2e-148 530.4 368 76.6
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 1.5e-148 530.0 376 73.1
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 1.0e-147 527.3 310 82.9
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 1.0e-147 527.3 390 77.4
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 1.7e-147 526.6 310 80.3
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 2.2e-147 526.2 385 77.9
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 4.9e-147 525.0 366 80.9
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 1.1e-146 523.9 377 78.5
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 1.1e-146 523.9 313 79.2
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.4e-146 523.5 310 80.3
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.9e-146 523.1 385 78.2
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.9e-146 523.1 312 80.4
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 3.2e-146 522.3 383 74.4
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 7.1e-146 521.2 360 71.4
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 7.1e-146 521.2 316 79.7
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 4.6e-145 518.5 354 71.5
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 6.0e-145 518.1 311 80.7
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 1.0e-144 517.3 387 69.8
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 1.3e-144 516.9 360 72.8
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.8e-144 516.5 359 75.2
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.8e-144 516.5 310 79.7
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 1.1e-143 513.8 312 79.8
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 2.5e-143 512.7 305 80.0
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 2.8e-142 509.2 310 78.7
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 1.1e-141 507.3 468 61.3
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 1.1e-141 507.3 311 78.8
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 1.8e-141 506.5 312 77.2
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 1.2e-140 503.8 343 73.2
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 1.5e-140 503.4 380 70.3
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 5.0e-139 498.4 371 75.2
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 9.4e-138 494.2 360 68.9
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 1.6e-137 493.4 307 79.2
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.6e-137 491.9 383 70.8
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 3.0e-136 489.2 386 66.3
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 7.4e-135 484.6 300 77.3
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 2.0e-132 476.5 344 75.6
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 8.5e-131 471.1 314 79.6
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.2e-130 469.2 358 69.8
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 2.7e-129 466.1 298 81.5
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 6.1e-129 464.9 359 72.7
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 1.1e-127 460.7 280 79.3
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 1.3e-126 457.2 369 69.1
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 1.4e-125 453.8 308 74.4
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 2.0e-124 449.9 358 61.7
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 2.6e-124 449.5 298 69.8
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.3e-123 447.2 395 62.0
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 8.0e-121 438.0 297 68.7
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.6e-119 433.0 298 67.8
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.4e-117 426.4 299 67.9
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 2.0e-116 423.3 277 75.5
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.5e-114 417.2 379 61.5
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.9e-114 416.8 370 60.3
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 2.7e-113 412.9 320 62.5
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 4.0e-112 409.1 333 61.3
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.2e-107 393.3 379 64.1
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 5.0e-107 392.1 421 52.5
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 1.1e-106 391.0 221 85.5
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 4.8e-102 375.6 239 77.0
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 2.3e-96 356.7 300 58.0
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 4.4e-87 325.9 212 71.7
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 6.4e-86 322.0 256 68.4
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 4.3e-66 256.1 150 82.7
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 2.2e-62 243.8 322 48.4
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 2.1e-57 227.3 189 59.8
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 1.9e-53 214.2 174 67.8
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 8.4e-46 188.7 176 55.7
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 1.9e-34 151.0 96 77.1
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 7.1e-29 132.5 307 30.9
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 1.2e-28 131.7 100 67.0
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.6e-25 121.3 361 28.5
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 6.5e-22 109.4 244 35.2
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 7.2e-21 105.9 282 27.3
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 3.6e-20 103.6 65 70.8
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 7.9e-20 102.4 68 75.0
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 7.9e-20 102.4 68 75.0
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 1.8e-19 101.3 68 75.0
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 2.8e-17 94.0 89 74.2
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.1e-16 92.0 81 65.4
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 9.1e-16 89.0 59 71.2
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.6e-15 87.4 90 70.0
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.7e-14 84.7 380 24.2
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 2.0e-10 71.2 108 35.2
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.7e-09 68.2 33 93.9
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 4.1e-08 63.5 71 73.2
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.5e-07 61.6 41 70.7
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 2.6e-07 60.8 41 68.3
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 4.5e-07 60.1 39 71.8
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 1.0e-06 58.9 35 74.3


User provided reference genes

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