Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 9.9e-300 1032.7 538 100.0
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 6.2e-294 1013.4 572 93.7
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 2.6e-74 283.9 620 35.8
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.4e-51 208.4 509 35.2
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.3e-49 201.8 542 31.9
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 5.5e-48 196.4 560 31.6
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 9.3e-48 195.7 418 37.3
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 9.3e-48 195.7 547 32.5
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.2e-47 195.3 550 33.3
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.6e-47 194.9 557 33.8
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 2.7e-47 194.1 546 32.2
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 7.9e-47 192.6 309 42.7
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 1.0e-46 192.2 545 33.0
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.3e-46 191.8 559 33.1
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 3.9e-46 190.3 553 33.1
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 5.7e-45 186.4 529 34.0
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 3.1e-43 180.6 340 39.7
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 2.0e-42 177.9 158 58.2
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 5.9e-42 176.4 546 29.9
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 7.7e-42 176.0 546 30.8
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.5e-40 171.0 173 53.8
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 2.5e-40 171.0 289 41.9
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 4.2e-40 170.2 590 32.0
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.2e-39 168.7 633 28.1
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 2.1e-39 167.9 544 30.7
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 2.1e-39 167.9 531 31.1
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 3.6e-39 167.2 519 31.6
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 7.9e-39 166.0 572 32.2
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.9e-39 166.0 265 44.5
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 7.9e-39 166.0 549 31.7
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 2.3e-38 164.5 296 38.2
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.0e-38 164.1 552 28.8
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 5.1e-38 163.3 567 31.6
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 6.7e-38 162.9 265 44.2
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 8.8e-38 162.5 265 44.2
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.5e-37 161.8 169 51.5
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 2.0e-37 161.4 546 28.6
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.0e-37 161.4 548 29.6
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 9.7e-37 159.1 582 29.7
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 1.3e-36 158.7 330 35.5
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 3.7e-36 157.1 521 29.4
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 8.2e-36 156.0 536 28.9
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.1e-35 154.1 606 28.5
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 9.1e-35 152.5 533 28.7
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 3.4e-34 150.6 233 40.8
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.5e-34 150.2 554 29.8
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 1.3e-33 148.7 235 40.4
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 2.9e-33 147.5 497 29.8
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 2.9e-33 147.5 230 42.6
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.8e-33 147.1 579 28.7
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 6.5e-33 146.4 166 48.2
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 1.1e-32 145.6 516 28.1
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.1e-32 145.6 170 52.9
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 1.4e-32 145.2 210 41.9
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 4.2e-32 143.7 603 27.9
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 2.1e-31 141.4 470 30.4
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 2.7e-31 141.0 544 27.8
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 3.6e-31 140.6 130 56.2
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.0e-30 139.0 131 57.3
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.0e-30 139.0 537 27.7
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.3e-30 137.9 266 36.5
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 5.1e-30 136.7 468 29.9
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.5e-29 135.2 259 38.6
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 2.0e-29 134.8 560 27.9
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 9.7e-29 132.5 632 28.0
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 2.2e-28 131.3 297 35.0
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 4.8e-28 130.2 372 30.1
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 5.3e-27 126.7 556 27.9
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.6e-26 125.2 172 49.4
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 4.5e-26 123.6 297 32.3
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 7.7e-26 122.9 279 33.7
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.7e-25 121.7 449 29.6
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 5.0e-25 120.2 393 29.0
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 6.5e-25 119.8 433 27.0
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 1.1e-24 119.0 587 25.9
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 3.2e-24 117.5 307 32.2
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 5.5e-24 116.7 425 31.1
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 3.6e-23 114.0 243 33.7
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 3.6e-23 114.0 411 31.1
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 3.6e-23 114.0 370 30.8
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.0e-22 112.5 317 31.5
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 2.3e-22 111.3 314 32.2
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 3.0e-22 110.9 312 31.4
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 4.0e-22 110.5 431 29.5
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 8.8e-22 109.4 314 30.9
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 2.0e-21 108.2 312 28.8
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 2.6e-21 107.8 328 29.6
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 6.3e-20 103.2 235 34.9
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 2.7e-18 97.8 425 28.0
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 7.7e-18 96.3 419 28.9
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 3.8e-17 94.0 192 37.5
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.5e-16 92.0 189 33.9
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 4.2e-16 90.5 508 26.2
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 5.5e-16 90.1 66 62.1
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 5.5e-16 90.1 315 30.5
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.2e-15 89.0 194 33.5
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.2e-15 89.0 194 33.5
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 1.6e-15 88.6 137 39.4
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.6e-15 88.6 188 31.9
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 8.0e-15 86.3 240 30.8
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 2.3e-14 84.7 128 38.3
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 5.2e-14 83.6 223 30.0
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 2.6e-13 81.3 112 41.1
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 2.6e-13 81.3 521 26.1
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 4.4e-13 80.5 425 25.9
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.6e-10 72.0 450 24.4
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 1.3e-09 68.9 216 30.1
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 3.2e-08 64.3 274 27.0
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 2.3e-06 58.2 123 32.5


User provided reference genes

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