Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 1.0e-279 966.1 483 100.0
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 2.3e-215 752.3 483 77.0
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 5.2e-215 751.1 498 76.9
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 6.3e-213 744.2 481 77.1
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 6.3e-213 744.2 478 77.2
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 3.5e-211 738.4 483 75.8
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 1.0e-210 736.9 482 76.8
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 1.1e-209 733.4 479 75.4
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 9.5e-209 730.3 479 75.4
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 2.1e-208 729.2 479 75.4
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 6.1e-208 727.6 485 75.1
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 8.0e-208 727.2 484 74.2
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 8.0e-208 727.2 483 75.4
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.3e-207 725.7 479 75.4
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 6.8e-207 724.2 481 75.3
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 8.9e-207 723.8 479 75.4
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 4.4e-206 721.5 481 75.3
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 5.7e-206 721.1 447 80.1
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 5.7e-206 721.1 480 74.8
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 5.7e-206 721.1 484 75.4
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 1.3e-205 719.9 483 73.7
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 1.3e-205 719.9 484 74.2
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 1.7e-205 719.5 484 73.6
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 1.7e-205 719.5 484 74.2
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 2.8e-205 718.8 483 73.3
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 3.1e-204 715.3 480 74.2
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 4.1e-204 714.9 481 73.2
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 4.1e-204 714.9 480 73.8
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.2e-203 713.4 477 75.1
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 3.5e-203 711.8 477 74.6
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 5.9e-203 711.1 484 72.7
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.0e-202 710.3 483 73.9
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 2.9e-202 708.8 508 69.7
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 3.8e-202 708.4 482 73.0
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 5.0e-202 708.0 479 73.3
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 6.6e-202 707.6 482 73.0
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 3.3e-201 705.3 500 70.6
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 4.3e-201 704.9 483 72.9
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 5.6e-201 704.5 479 75.4
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 7.3e-201 704.1 479 72.7
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 1.2e-200 703.4 482 72.6
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 2.8e-200 702.2 488 71.3
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 3.6e-200 701.8 489 70.8
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 4.7e-200 701.4 477 72.1
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 2.3e-199 699.1 479 72.9
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 4.0e-199 698.4 484 73.1
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 5.2e-199 698.0 484 72.3
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 8.9e-199 697.2 489 70.3
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 8.9e-199 697.2 488 70.7
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 3.4e-198 695.3 484 73.1
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 5.8e-198 694.5 487 70.6
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 5.8e-198 694.5 463 72.8
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 1.3e-197 693.3 486 69.8
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.7e-197 693.0 489 70.8
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 2.9e-197 692.2 488 70.5
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 3.7e-197 691.8 481 70.5
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 6.4e-197 691.0 479 70.6
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 8.3e-197 690.6 486 71.2
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 1.4e-196 689.9 478 72.2
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.8e-196 689.5 486 70.8
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 1.8e-196 689.5 461 75.3
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 2.4e-196 689.1 484 69.6
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 2.4e-196 689.1 481 70.5
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 3.2e-196 688.7 479 69.7
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 4.1e-196 688.3 477 71.3
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 1.0e-194 683.7 490 69.8
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 1.3e-194 683.3 477 70.4
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 1.1e-193 680.2 478 69.0
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 3.3e-193 678.7 479 71.8
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 1.2e-192 676.8 489 68.1
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 1.2e-192 676.8 481 71.5
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 2.3e-191 672.5 479 68.1
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 2.0e-190 669.5 498 66.5
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 2.0e-190 669.5 520 68.1
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 3.4e-190 668.7 479 68.1
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 3.4e-190 668.7 461 69.6
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 3.4e-190 668.7 484 67.4
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 5.8e-190 667.9 477 68.3
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 7.5e-190 667.5 479 67.6
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 3.7e-189 665.2 490 66.9
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 7.0e-188 661.0 479 67.6
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 7.0e-188 661.0 499 65.5
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 9.2e-188 660.6 488 67.8
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 1.2e-187 660.2 511 67.3
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.2e-187 660.2 477 68.6
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 2.7e-187 659.1 508 64.4
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 1.7e-186 656.4 479 66.8
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 1.7e-186 656.4 486 69.1
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 3.0e-186 655.6 479 67.0
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 1.1e-183 647.1 483 67.9
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 3.4e-182 642.1 437 73.5
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 9.9e-182 640.6 515 63.7
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 4.1e-180 635.2 466 65.2
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 1.3e-178 630.2 478 66.5
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 1.8e-175 619.8 424 71.0
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 2.9e-173 612.5 389 74.3
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 1.2e-171 607.1 411 71.5
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 4.6e-171 605.1 443 67.0
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 9.6e-169 597.4 495 63.8
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 2.8e-168 595.9 409 72.9
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 6.2e-168 594.7 479 64.9
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 1.3e-165 587.0 483 61.7
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 2.9e-165 585.9 477 62.9
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 3.3e-161 572.4 322 86.0
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 1.1e-151 540.8 457 58.0
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 1.2e-150 537.3 462 56.3
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 4.9e-149 531.9 461 55.3
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 5.5e-148 528.5 464 57.1
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 5.3e-143 511.9 465 52.7
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 2.0e-129 466.8 485 54.0
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 2.5e-129 466.5 276 79.0
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 4.2e-116 422.5 477 51.6
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 1.7e-112 410.6 465 43.9
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 6.3e-104 382.1 473 43.8
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 1.2e-97 361.3 367 54.5
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 2.0e-97 360.5 315 59.7
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 2.0e-89 334.0 182 87.4
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.2e-83 314.7 391 42.2
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 4.7e-59 233.0 219 58.4
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 2.7e-54 217.2 108 89.8
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 3.9e-53 213.4 370 37.8
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 8.7e-53 212.2 372 39.2
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 6.6e-45 186.0 360 36.1
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 1.3e-40 171.8 124 71.0
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 6.0e-38 162.9 154 60.4
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 1.5e-36 158.3 137 61.3
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 1.0e-29 135.6 85 67.1
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 1.5e-28 131.7 144 50.7
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 2.5e-28 131.0 131 55.0
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 9.3e-23 112.5 67 73.1
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 9.3e-23 112.5 69 71.0
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 3.9e-21 107.1 192 32.3
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 6.7e-21 106.3 76 65.8
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 5.3e-18 96.7 67 68.7
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 5.3e-18 96.7 70 64.3
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 6.9e-18 96.3 103 53.4
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 9.4e-15 85.9 56 76.8
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 1.3e-11 75.5 132 39.4


User provided reference genes

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