Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024636 Daucus carota HOM05D002468 ORTHO05D005371 7.9e-247 856.7 438 100.0
CSS0032961 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 3.1e-198 695.3 443 83.7
CSS0030444 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 4.0e-198 694.9 444 82.7
HanXRQChr17g0540381 Helianthus annuus HOM05D002468 ORTHO05D005371 1.2e-197 693.3 410 86.3
ECA246G0169 Erigeron canadensis HOM05D002468 ORTHO05D005371 4.4e-197 691.4 440 82.7
Rhsim12G0017100 Rhododendron simsii HOM05D002468 ORTHO05D005371 5.8e-197 691.0 396 90.2
Actinidia30583 Actinidia chinensis HOM05D002468 ORTHO05D005371 7.5e-197 690.6 445 82.0
Potri.001G068200 Populus trichocarpa HOM05D002468 ORTHO05D005371 2.9e-196 688.7 403 86.4
Cc11_g14960 Coffea canephora HOM05D002468 ORTHO05D005371 3.7e-196 688.3 446 80.9
Dinv17539 Davidia involucrata HOM05D002468 ORTHO05D005371 3.7e-196 688.3 443 82.4
PGSC0003DMG402028027 Solanum tuberosum HOM05D002468 ORTHO05D005371 1.1e-195 686.8 443 81.5
MD16G1141700 Malus domestica HOM05D002468 ORTHO05D005371 1.9e-195 686.0 445 81.6
MD13G1131400 Malus domestica HOM05D002468 ORTHO05D005371 2.4e-195 685.6 444 81.3
TAR371G0123 Trochodendron aralioides HOM05D002468 ORTHO05D005371 2.4e-195 685.6 398 88.2
Solyc11g033288.1 Solanum lycopersicum HOM05D002468 ORTHO05D005371 3.2e-195 685.3 443 81.7
GSVIVG01001098001 Vitis vinifera HOM05D002468 ORTHO05D005371 3.2e-195 685.3 443 82.4
TAR629G1443 Trochodendron aralioides HOM05D002468 ORTHO05D005371 4.1e-195 684.9 440 81.8
Sopen11g017140 Solanum pennellii HOM05D002468 ORTHO05D005371 7.0e-195 684.1 443 81.5
vmacro01017 Vaccinium macrocarpon HOM05D002468 ORTHO05D005371 9.2e-195 683.7 394 88.6
Dinv03336 Davidia involucrata HOM05D002468 ORTHO05D005371 1.2e-194 683.3 446 81.6
Lsat_1_v5_gn_3_32661 Lactuca sativa HOM05D002468 ORTHO05D005371 1.2e-194 683.3 440 81.6
Cpa.g.sc38.67 Carica papaya HOM05D002468 ORTHO05D005371 3.5e-194 681.8 443 81.9
Peaxi162Scf00842g00319 Petunia axillaris HOM05D002468 ORTHO05D005371 4.6e-194 681.4 398 87.4
Thecc.02G191400 Theobroma cacao HOM05D002468 ORTHO05D005371 4.6e-194 681.4 444 81.3
Lj1g0025256 Lotus japonicus HOM05D002468 ORTHO05D005371 1.7e-193 679.5 444 80.0
Sabra03G0117600 Salix brachista HOM05D002468 ORTHO05D005371 1.7e-193 679.5 441 81.0
MSTRG.449 Avicennia marina HOM05D002468 ORTHO05D005371 2.3e-193 679.1 398 86.9
Ciclev10004979m.g Citrus clementina HOM05D002468 ORTHO05D005371 2.3e-193 679.1 443 80.6
CAN.G624.1 Capsicum annuum HOM05D002468 ORTHO05D005371 3.0e-193 678.7 443 79.9
Manes.08G100600 Manihot esculenta HOM05D002468 ORTHO05D005371 3.0e-193 678.7 398 86.9
TWI18G0725 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 3.0e-193 678.7 448 81.2
CiPaw.06G109900 Carya illinoinensis HOM05D002468 ORTHO05D005371 3.9e-193 678.3 404 85.9
FvH4_4g22560 Fragaria vesca HOM05D002468 ORTHO05D005371 5.1e-193 677.9 446 80.7
Glyma.08G362900 Glycine max HOM05D002468 ORTHO05D005371 6.6e-193 677.6 396 86.9
TPR.G9718 Trifolium pratense HOM05D002468 ORTHO05D005371 1.1e-192 676.8 433 79.9
Duzib132G1053 Durio zibethinus HOM05D002468 ORTHO05D005371 2.5e-192 675.6 444 79.7
FAN07G2580 Fragaria x ananassa HOM05D002468 ORTHO05D005371 2.5e-192 675.6 446 80.0
Oeu010257.1 Olea europaea HOM05D002468 ORTHO05D005371 4.3e-192 674.9 443 81.0
VMungo1383G1406 Vigna mungo HOM05D002468 ORTHO05D005371 4.3e-192 674.9 443 79.2
CANSAT01G0579 Cannabis sativa HOM05D002468 ORTHO05D005371 5.6e-192 674.5 445 80.2
MELO3C017817.2 Cucumis melo HOM05D002468 ORTHO05D005371 5.6e-192 674.5 439 80.9
TWI36G1422 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 5.6e-192 674.5 395 87.1
HanXRQChr06g0175161 Helianthus annuus HOM05D002468 ORTHO05D005371 7.3e-192 674.1 405 85.4
Prupe.1G214200 Prunus persica HOM05D002468 ORTHO05D005371 9.5e-192 673.7 445 80.0
PGR119G1329 Punica granatum HOM05D002468 ORTHO05D005371 9.5e-192 673.7 445 80.0
Eucgr.G01978 Eucalyptus grandis HOM05D002468 ORTHO05D005371 1.2e-191 673.3 444 80.0
RcHm_v2.0_Chr4g0428801 Rosa chinensis HOM05D002468 ORTHO05D005371 1.2e-191 673.3 447 79.9
SalBow2G0960 Salvia bowleyana HOM05D002468 ORTHO05D005371 1.2e-191 673.3 445 79.8
FAN12G2192 Fragaria x ananassa HOM05D002468 ORTHO05D005371 1.6e-191 672.9 437 80.5
Atru.chr12.1428 Acer truncatum HOM05D002468 ORTHO05D005371 2.1e-191 672.5 443 79.7
Phvul.008G003600 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 3.6e-191 671.8 444 79.3
QL03p049039 Quercus lobata HOM05D002468 ORTHO05D005371 3.6e-191 671.8 442 80.3
arahy.Tifrunner.gnm1.ann1.PCZ0HW Arachis hypogaea HOM05D002468 ORTHO05D005371 6.2e-191 671.0 439 78.8
arahy.Tifrunner.gnm1.ann1.S6Z2J3 Arachis hypogaea HOM05D002468 ORTHO05D005371 6.2e-191 671.0 439 78.8
Medtr7g006560 Medicago truncatula HOM05D002468 ORTHO05D005371 6.2e-191 671.0 440 79.8
THA.LOC104807252 Tarenaya hassleriana HOM05D002468 ORTHO05D005371 6.2e-191 671.0 398 85.7
CiPaw.05G100700 Carya illinoinensis HOM05D002468 ORTHO05D005371 1.1e-190 670.2 439 79.0
Manes.09G188600 Manihot esculenta HOM05D002468 ORTHO05D005371 1.1e-190 670.2 396 85.4
MSTRG.8058 Avicennia marina HOM05D002468 ORTHO05D005371 2.3e-190 669.1 445 78.4
Glyma.18G299100 Glycine max HOM05D002468 ORTHO05D005371 2.3e-190 669.1 442 79.2
CsaV3_4G002210 Cucumis sativus L. HOM05D002468 ORTHO05D005371 3.1e-190 668.7 443 80.4
Cfa009455 Carpinus fangiana HOM05D002468 ORTHO05D005371 4.0e-190 668.3 441 80.5
ClCG07G011940 Citrullus lanatus HOM05D002468 ORTHO05D005371 4.0e-190 668.3 443 80.8
Gohir.D04G140900 Gossypium hirsutum HOM05D002468 ORTHO05D005371 5.2e-190 667.9 443 79.7
FAN17G0051 Fragaria x ananassa HOM05D002468 ORTHO05D005371 8.9e-190 667.2 444 79.5
Ca_04094_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 1.2e-189 666.8 442 79.4
Gorai.012G125900 Gossypium raimondii HOM05D002468 ORTHO05D005371 1.5e-189 666.4 443 79.7
Aqoxy5G03074 Aquilegia oxysepala HOM05D002468 ORTHO05D005371 2.0e-189 666.0 438 80.1
Gohir.A04G101700 Gossypium hirsutum HOM05D002468 ORTHO05D005371 5.8e-189 664.5 441 79.6
Duzib052G0101 Durio zibethinus HOM05D002468 ORTHO05D005371 1.3e-188 663.3 444 78.8
Sc11g0000080 Simmondsia chinensis HOM05D002468 ORTHO05D005371 4.9e-188 661.4 436 77.8
BraA10t44546Z Brassica rapa HOM05D002468 ORTHO05D005371 1.9e-187 659.4 440 80.2
Lalb_Chr04g0257301 Lupinus albus HOM05D002468 ORTHO05D005371 2.4e-187 659.1 440 78.4
PSO017G4233 Papaver somniferum HOM05D002468 ORTHO05D005371 5.4e-187 657.9 437 79.2
A10p24820 Brassica napus HOM05D002468 ORTHO05D005371 9.2e-187 657.1 446 79.1
EL10Ac6g13612 Beta vulgaris HOM05D002468 ORTHO05D005371 2.1e-186 656.0 443 77.0
C09p63670 Brassica napus HOM05D002468 ORTHO05D005371 2.7e-186 655.6 440 79.5
BolC9t59208H Brassica oleracea HOM05D002468 ORTHO05D005371 2.7e-186 655.6 440 79.5
Psat3g207000 Pisum sativum HOM05D002468 ORTHO05D005371 2.7e-186 655.6 376 87.8
Sed0000476 Sechium edule HOM05D002468 ORTHO05D005371 3.5e-186 655.2 439 79.3
Carub.0006s1158 Capsella rubella HOM05D002468 ORTHO05D005371 7.8e-186 654.1 440 79.1
Thhalv10013572m.g Eutrema salsugineum HOM05D002468 ORTHO05D005371 1.7e-185 652.9 396 84.6
Sed0003563 Sechium edule HOM05D002468 ORTHO05D005371 5.1e-185 651.4 441 78.7
PSO478G3355 Papaver somniferum HOM05D002468 ORTHO05D005371 8.6e-185 650.6 439 78.6
AUR62028839 Chenopodium quinoa HOM05D002468 ORTHO05D005371 1.1e-184 650.2 402 82.1
Sp6g30600 Schrenkiella parvula HOM05D002468 ORTHO05D005371 1.1e-184 650.2 398 84.2
AUR62005716 Chenopodium quinoa HOM05D002468 ORTHO05D005371 2.5e-184 649.0 402 81.8
Migut.K01049 Erythranthe guttata HOM05D002468 ORTHO05D005371 2.5e-184 649.0 445 78.4
C02p06130 Brassica napus HOM05D002468 ORTHO05D005371 5.6e-184 647.9 398 83.7
BolC2t06554H Brassica oleracea HOM05D002468 ORTHO05D005371 5.6e-184 647.9 398 83.7
BcaC04g19118 Brassica carinata HOM05D002468 ORTHO05D005371 2.1e-183 646.0 399 83.5
CARHR200010 Cardamine hirsuta HOM05D002468 ORTHO05D005371 2.8e-183 645.6 396 84.3
AT5G13420 Arabidopsis thaliana HOM05D002468 ORTHO05D005371 4.7e-183 644.8 438 78.5
AL6G24040 Arabidopsis lyrata HOM05D002468 ORTHO05D005371 6.2e-183 644.4 396 84.3
CSS0032033 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 1.4e-182 643.3 389 84.3
HanXRQChr06g0175171 Helianthus annuus HOM05D002468 ORTHO05D005371 1.4e-182 643.3 370 85.9
MBI07_g35982_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 4.0e-182 641.7 439 76.5
unitig_8.g2893 Utricularia gibba HOM05D002468 ORTHO05D005371 1.5e-181 639.8 426 78.9
Hund14581 Selenicereus undatus HOM05D002468 ORTHO05D005371 2.6e-181 639.0 442 74.9
Ah.03g135540 Amaranthus hybridus HOM05D002468 ORTHO05D005371 3.4e-181 638.6 442 76.0
SGA_v2.0_scaffold258G45768 Striga asiatica HOM05D002468 ORTHO05D005371 3.4e-181 638.6 448 76.6
Os01g0926300 Oryza sativa ssp. japonica HOM05D002468 ORTHO05D005371 5.8e-181 637.9 408 80.1
A02p01910 Brassica napus HOM05D002468 ORTHO05D005371 9.9e-181 637.1 398 82.7
BraA02t05164Z Brassica rapa HOM05D002468 ORTHO05D005371 9.9e-181 637.1 398 82.7
CDE05G3080 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 9.9e-181 637.1 398 80.4
BraA03t09933Z Brassica rapa HOM05D002468 ORTHO05D005371 4.9e-180 634.8 403 81.1
A03p05960 Brassica napus HOM05D002468 ORTHO05D005371 8.4e-180 634.0 403 81.1
C03p07000 Brassica napus HOM05D002468 ORTHO05D005371 2.4e-179 632.5 438 75.8
BolC3t13199H Brassica oleracea HOM05D002468 ORTHO05D005371 2.4e-179 632.5 438 75.8
Zm00001eb363880 Zea mays HOM05D002468 ORTHO05D005371 1.2e-178 630.2 393 80.9
Haze_12509 Corylus avellana HOM05D002468 ORTHO05D005371 4.6e-178 628.2 413 79.7
CDE05G2158 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 7.8e-178 627.5 398 79.4
HPP92_009801 Vanilla planifolia HOM05D002468 ORTHO05D005371 1.0e-177 627.1 419 77.3
ATR0582G307 Amborella trichopoda HOM05D002468 ORTHO05D005371 1.1e-176 623.6 378 83.1
Zm00001eb142730 Zea mays HOM05D002468 ORTHO05D005371 1.5e-176 623.2 416 77.2
MBI07_g48060_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 2.1e-175 619.4 449 73.1
Nitab4.5_0004349g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 8.1e-175 617.5 393 81.9
Aa31LG3G14290 Aethionema arabicum HOM05D002468 ORTHO05D005371 1.4e-171 606.7 470 69.4
Actinidia22113 Actinidia chinensis HOM05D002468 ORTHO05D005371 1.4e-166 590.1 383 81.5
BcaB01g05361 Brassica carinata HOM05D002468 ORTHO05D005371 5.3e-166 588.2 438 72.1
Nitab4.5_0002569g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 1.3e-161 573.5 445 71.7
Lj6C840T10 Lonicera japonica HOM05D002468 ORTHO05D005371 3.7e-159 565.5 307 93.8
BcaNung01156 Brassica carinata HOM05D002468 ORTHO05D005371 4.0e-158 562.0 347 83.6
Potri.003G161900 Populus trichocarpa HOM05D002468 ORTHO05D005371 8.7e-153 544.3 366 78.7
AagrBONN_evm.TU.Sc2ySwM_228.2334 Anthoceros agrestis HOM05D002468 ORTHO05D005371 1.1e-152 543.9 378 71.7
Lj4g0027400 Lotus japonicus HOM05D002468 ORTHO05D005371 1.9e-152 543.1 399 68.2
Lalb_Chr10g0091121 Lupinus albus HOM05D002468 ORTHO05D005371 2.2e-148 529.6 358 78.5
Glyma.05G199800 Glycine max HOM05D002468 ORTHO05D005371 4.9e-148 528.5 359 71.0
Lalb_Chr13g0296941 Lupinus albus HOM05D002468 ORTHO05D005371 6.5e-148 528.1 394 66.2
Medtr8g096130 Medicago truncatula HOM05D002468 ORTHO05D005371 1.9e-144 516.5 371 68.7
Mapoly0092s0071 Marchantia polymorpha HOM05D002468 ORTHO05D005371 2.2e-143 513.1 372 68.8
SMO367G1271 Selaginella moellendorffii HOM05D002468 ORTHO05D005371 8.2e-143 511.1 361 72.3
TPR.G12900 Trifolium pratense HOM05D002468 ORTHO05D005371 1.8e-142 510.0 390 66.2
VMungo0251G2964 Vigna mungo HOM05D002468 ORTHO05D001247 5.3e-142 508.4 362 66.9
Ca_16823_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 1.2e-141 507.3 392 64.0
Phvul.002G281000 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 2.0e-141 506.5 358 69.0
Mapoly0092s0073 Marchantia polymorpha HOM05D002468 ORTHO05D005371 3.4e-141 505.8 372 68.0
Mapoly0092s0072 Marchantia polymorpha HOM05D002468 ORTHO05D005371 2.2e-140 503.1 432 60.9
Pp3c26_4790 Physcomitrium patens HOM05D002468 ORTHO05D005371 9.7e-136 487.6 392 63.0
ClCG06G013000 Citrullus lanatus HOM05D002468 ORTHO05D005371 2.2e-135 486.5 363 64.2
MELO3C017506.2 Cucumis melo HOM05D002468 ORTHO05D005371 1.3e-132 477.2 366 63.4
SHI04110 Sapria himalayana HOM05D002468 ORTHO05D005371 4.7e-130 468.8 317 76.7
Cpa.g.sc2215.1 Carica papaya HOM05D002468 ORTHO05D005371 7.9e-130 468.0 360 63.6
CBR_g51451 Chara braunii HOM05D002468 ORTHO05D005371 9.4e-115 417.9 377 59.9
arahy.Tifrunner.gnm1.ann1.93S04R Arachis hypogaea HOM05D002468 ORTHO05D005371 4.7e-98 362.5 366 54.6
Eucgr.H00650 Eucalyptus grandis HOM05D002468 ORTHO05D005371 4.1e-94 349.4 302 61.3
Lj2g0022028 Lotus japonicus HOM05D002468 ORTHO05D005371 9.5e-83 311.6 225 71.1
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 2.4e-70 270.4 186 78.5
Mapoly0189s0003 Marchantia polymorpha HOM05D002468 ORTHO05D005371 4.3e-67 259.6 328 43.6
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 1.0e-60 238.4 139 88.5
HanXRQChr10g0304361 Helianthus annuus HOM05D002468 ORTHO05D005371 1.9e-59 234.2 121 90.9
arahy.Tifrunner.gnm1.ann1.1XR5VC Arachis hypogaea HOM05D002468 ORTHO05D005371 3.6e-58 229.9 197 59.4
Glyma.15G205533 Glycine max HOM05D002468 ORTHO05D005371 2.0e-56 224.2 154 72.1
CsaV3_1G031170 Cucumis sativus L. HOM05D002468 ORTHO05D005371 2.2e-39 167.5 162 54.9
Glyma.08G007300 Glycine max HOM05D002468 ORTHO05D005371 5.5e-38 162.9 119 68.9
BcaB01g05316 Brassica carinata HOM05D000877 ORTHO05D012137 1.1e-35 155.2 111 76.6
BolC3t13237H Brassica oleracea HOM05D000877 ORTHO05D012137 1.2e-32 145.2 81 90.1
Lalb_Chr10g0091111 Lupinus albus HOM05D002468 ORTHO05D005371 1.7e-31 141.4 82 86.6
CsaV3_1G031160 Cucumis sativus L. HOM05D002468 ORTHO05D005371 3.3e-27 127.1 80 71.2
SGA_v2.0_scaffold4G02418 Striga asiatica HOM05D002468 ORTHO05D051394 1.8e-25 121.3 99 60.6
SEGI_31132 Sequoiadendron giganteum HOM05D002468 ORTHO05D005371 9.7e-19 99.0 61 70.5
SGA_v2.0_scaffold528G52739 Striga asiatica HOM05D002468 ORTHO05D051394 6.3e-18 96.3 51 82.4
Pp3c3_15390 Physcomitrium patens HOM05D002468 ORTHO05D005371 1.3e-15 88.6 94 52.1
vmacro08874 Vaccinium macrocarpon HOM05D002468 ORTHO05D013153 9.1e-09 65.9 142 36.6


User provided reference genes

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