Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 5.9e-209 730.7 394 100.0
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 2.5e-106 389.8 331 67.4
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 7.2e-106 388.3 328 67.1
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 6.1e-105 385.2 362 64.6
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 3.0e-104 382.9 325 64.0
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 9.7e-103 377.9 336 67.0
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 1.7e-102 377.1 338 64.2
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 2.8e-102 376.3 336 65.8
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 2.8e-102 376.3 341 63.6
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 8.2e-102 374.8 329 66.3
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 3.1e-101 372.9 330 65.5
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 3.1e-101 372.9 344 65.1
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 1.2e-100 370.9 331 67.7
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 2.6e-100 369.8 335 64.8
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 1.7e-99 367.1 335 65.1
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 1.7e-99 367.1 335 65.1
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 2.2e-99 366.7 334 64.7
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 2.2e-99 366.7 344 66.3
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 2.9e-99 366.3 336 62.2
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 1.9e-98 363.6 339 64.0
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 1.9e-98 363.6 339 64.0
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 3.2e-98 362.8 338 63.0
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 2.1e-97 360.1 330 61.8
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 2.7e-97 359.8 339 61.9
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 2.7e-97 359.8 334 65.6
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 8.0e-97 358.2 340 65.3
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 8.0e-97 358.2 330 61.8
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 1.4e-96 357.5 345 62.9
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 2.3e-96 356.7 334 63.8
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 3.0e-96 356.3 342 60.5
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 2.0e-95 353.6 333 63.7
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 2.6e-95 353.2 333 65.2
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 3.3e-95 352.8 340 62.6
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 4.4e-95 352.4 335 63.6
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 2.2e-94 350.1 341 59.8
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 2.2e-94 350.1 338 59.5
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 1.1e-93 347.8 341 60.1
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 1.4e-93 347.4 326 63.2
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 1.4e-93 347.4 340 60.3
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 2.4e-93 346.7 330 62.7
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 4.1e-93 345.9 337 60.8
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 5.3e-93 345.5 337 62.3
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 9.1e-93 344.7 329 62.9
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.6e-92 344.0 338 62.7
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 2.0e-92 343.6 339 58.4
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 2.0e-92 343.6 334 61.7
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 4.5e-92 342.4 336 64.3
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 7.7e-92 341.7 332 62.3
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 7.7e-92 341.7 332 62.3
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.7e-91 340.5 336 59.8
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 3.8e-91 339.3 343 56.9
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 3.8e-91 339.3 327 60.2
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 5.0e-91 339.0 336 64.0
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 1.1e-90 337.8 339 59.9
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.5e-90 337.4 336 58.6
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 1.9e-90 337.0 384 56.8
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 2.5e-90 336.7 335 61.8
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 5.5e-90 335.5 274 71.9
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 5.5e-90 335.5 336 58.3
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 9.4e-90 334.7 334 59.9
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 1.6e-89 334.0 336 58.0
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.6e-89 334.0 336 58.0
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 4.7e-89 332.4 344 61.9
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 8.0e-89 331.6 337 60.5
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 8.0e-89 331.6 260 70.0
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 1.4e-88 330.9 258 71.3
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 1.8e-88 330.5 339 58.1
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 4.0e-88 329.3 353 59.5
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 4.0e-88 329.3 352 60.5
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 2.6e-87 326.6 348 59.5
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 1.3e-86 324.3 340 59.7
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 2.8e-86 323.2 349 55.3
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 4.8e-86 322.4 329 60.2
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 1.8e-85 320.5 335 55.8
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 5.4e-85 318.9 325 60.9
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 7.0e-85 318.5 333 61.9
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 1.2e-84 317.8 223 74.9
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 3.5e-84 316.2 334 59.0
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 2.9e-83 313.2 247 69.2
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 3.8e-83 312.8 182 84.1
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 6.5e-83 312.0 176 85.8
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 8.6e-83 311.6 340 55.0
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 2.5e-82 310.1 334 59.6
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.2e-81 307.8 329 57.1
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 6.1e-81 305.4 334 59.6
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 1.4e-80 304.3 250 64.8
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 5.2e-80 302.4 179 82.1
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 5.2e-80 302.4 336 58.3
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 2.0e-79 300.4 325 59.7
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 2.8e-78 296.6 326 54.3
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 3.7e-78 296.2 415 49.2
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 3.3e-74 283.1 345 53.6
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 8.0e-73 278.5 177 75.7
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 8.0e-73 278.5 324 53.4
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 1.9e-69 267.3 379 51.2
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 4.1e-69 266.2 278 59.4
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 2.7e-68 263.5 310 54.8
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 1.1e-66 258.1 273 57.1
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 1.9e-66 257.3 252 60.3
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 7.3e-66 255.4 273 56.4
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 5.2e-64 249.2 271 55.0
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 8.9e-64 248.4 234 60.3
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 7.3e-58 228.8 196 59.7
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 4.7e-57 226.1 323 47.7
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 5.4e-53 212.6 294 54.1
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 6.2e-49 199.1 231 46.3
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 1.3e-46 191.4 247 46.2
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 1.1e-45 188.3 157 56.7
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 9.2e-45 185.3 226 47.3
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 4.0e-40 169.9 175 48.0
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 1.2e-20 105.1 126 42.1
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 1.1e-18 98.6 64 67.2
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 1.3e-17 95.1 61 80.3
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 2.1e-17 94.4 163 35.0
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 3.7e-17 93.6 126 41.3
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 1.7e-14 84.7 175 32.6
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 2.2e-14 84.3 52 82.7
Solyc05g013480.4 Solanum lycopersicum HOM05D006540 ORTHO05D008202 1.9e-10 71.2 192 39.1
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 2.2e-09 67.8 56 57.1
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 6.3e-09 66.2 44 63.6
Pp3c6_29630 Physcomitrium patens HOM05D006540 ORTHO05D008202 1.7e-06 58.2 87 36.8


User provided reference genes

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