Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024429 Daucus carota HOM05D003254 ORTHO05D003713 1.5e-69 266.2 147 100.0
DCAR_026513 Daucus carota HOM05D003254 ORTHO05D003713 4.2e-35 151.8 322 39.8
Oeu038630.2 Olea europaea HOM05D003254 ORTHO05D003713 1.6e-29 133.3 288 39.2
Actinidia15096 Actinidia chinensis HOM05D003254 ORTHO05D003713 1.0e-28 130.6 322 36.6
Oeu056711.1 Olea europaea HOM05D003254 ORTHO05D003713 6.5e-28 127.9 288 38.2
Migut.K00598 Erythranthe guttata HOM05D003254 ORTHO05D003713 1.5e-27 126.7 322 36.3
GSVIVG01005753001 Vitis vinifera HOM05D003254 ORTHO05D003713 1.5e-27 126.7 286 37.8
Ciclev10031076m.g Citrus clementina HOM05D003254 ORTHO05D003713 2.5e-27 125.9 320 35.9
Potri.008G186601 Populus trichocarpa HOM05D003254 ORTHO05D003713 4.2e-27 125.2 322 35.7
Medtr8g069390 Medicago truncatula HOM05D003254 ORTHO05D003713 5.5e-27 124.8 317 36.0
Ca_22585_v3 Cicer arietinum L. HOM05D003254 ORTHO05D003713 7.2e-27 124.4 321 35.8
Eucgr.B03285 Eucalyptus grandis HOM05D003254 ORTHO05D003713 7.2e-27 124.4 321 35.2
TWI18G1442 Tripterygium wilfordii HOM05D003254 ORTHO05D003713 9.4e-27 124.0 323 35.6
Nn4g22620 Nelumbo nucifera HOM05D003254 ORTHO05D003713 1.2e-26 123.6 320 35.6
Psat4g115400 Pisum sativum HOM05D003254 ORTHO05D003713 1.2e-26 123.6 321 36.1
Hma1.2p1_0223F.1_g093950 Hydrangea macrophylla HOM05D003254 ORTHO05D003713 1.6e-26 123.2 322 35.1
Peaxi162Scf00128g00139 Petunia axillaris HOM05D003254 ORTHO05D003713 1.6e-26 123.2 313 36.1
CARHR147580 Cardamine hirsuta HOM05D003254 ORTHO05D003713 2.1e-26 122.9 320 35.3
Glyma.18G144100 Glycine max HOM05D003254 ORTHO05D003713 2.1e-26 122.9 322 35.1
Hma1.2p1_0223F.1_g093940 Hydrangea macrophylla HOM05D003254 ORTHO05D003713 2.1e-26 122.9 321 34.9
Nitab4.5_0000370g0100 Nicotiana tabacum HOM05D003254 ORTHO05D003713 2.1e-26 122.9 320 35.3
Sabra10G0022500 Salix brachista HOM05D003254 ORTHO05D003713 2.7e-26 122.5 322 35.1
TWI36G1175 Tripterygium wilfordii HOM05D003254 ORTHO05D003713 2.7e-26 122.5 323 35.3
Lj6A812T47 Lonicera japonica HOM05D003254 ORTHO05D003713 3.6e-26 122.1 322 35.4
Aa31LG2G5970 Aethionema arabicum HOM05D003254 ORTHO05D003713 8.0e-26 120.9 322 35.1
Dinv24783 Davidia involucrata HOM05D003254 ORTHO05D003713 8.0e-26 120.9 322 35.1
Manes.12G023200 Manihot esculenta HOM05D003254 ORTHO05D003713 8.0e-26 120.9 324 35.2
Potri.010G046300 Populus trichocarpa HOM05D003254 ORTHO05D003713 8.0e-26 120.9 322 35.1
A09p03090 Brassica napus HOM05D003254 ORTHO05D003713 1.0e-25 120.6 320 35.0
BraA09t35947Z Brassica rapa HOM05D003254 ORTHO05D003713 1.0e-25 120.6 320 35.0
VMungo0251G2727 Vigna mungo HOM05D003254 ORTHO05D003713 1.0e-25 120.6 321 35.2
Glyma.08G282100 Glycine max HOM05D003254 ORTHO05D003713 1.4e-25 120.2 322 34.5
Sp2g15680 Schrenkiella parvula HOM05D003254 ORTHO05D003713 1.4e-25 120.2 319 34.5
MSTRG.566 Avicennia marina HOM05D003254 ORTHO05D003713 1.8e-25 119.8 322 36.0
BcaC04g23931 Brassica carinata HOM05D003254 ORTHO05D003713 1.8e-25 119.8 320 34.7
C09p03240 Brassica napus HOM05D003254 ORTHO05D003713 1.8e-25 119.8 320 34.7
BolC9t53249H Brassica oleracea HOM05D003254 ORTHO05D003713 1.8e-25 119.8 320 34.7
Carub.0005s0456 Capsella rubella HOM05D003254 ORTHO05D003713 1.8e-25 119.8 320 35.0
Cc11_g15740 Coffea canephora HOM05D003254 ORTHO05D003713 1.8e-25 119.8 322 35.1
Eucgr.H02499 Eucalyptus grandis HOM05D003254 ORTHO05D003713 1.8e-25 119.8 322 34.8
Thhalv10003891m.g Eutrema salsugineum HOM05D003254 ORTHO05D003713 1.8e-25 119.8 320 34.7
Phvul.003G064900 Phaseolus vulgaris HOM05D003254 ORTHO05D003713 1.8e-25 119.8 321 34.9
PGR119G0064 Punica granatum HOM05D003254 ORTHO05D003713 1.8e-25 119.8 322 35.4
TAR374G0119 Trochodendron aralioides HOM05D003254 ORTHO05D003713 1.8e-25 119.8 319 35.1
BraA06t27111Z Brassica rapa HOM05D003254 ORTHO05D003713 2.3e-25 119.4 321 34.3
CANSAT01G2197 Cannabis sativa HOM05D003254 ORTHO05D003713 2.3e-25 119.4 322 35.1
FAN07G0157 Fragaria x ananassa HOM05D003254 ORTHO05D003713 3.0e-25 119.0 318 34.9
AL5G15360 Arabidopsis lyrata HOM05D003254 ORTHO05D003713 4.0e-25 118.6 320 34.7
CsaV3_5G031110 Cucumis sativus L. HOM05D003254 ORTHO05D003713 4.0e-25 118.6 323 35.0
Nitab4.5_0003609g0020 Nicotiana tabacum HOM05D003254 ORTHO05D003713 4.0e-25 118.6 322 34.8
QL03p058091 Quercus lobata HOM05D003254 ORTHO05D003713 4.0e-25 118.6 321 34.9
AT3G26570 Arabidopsis thaliana HOM05D003254 ORTHO05D003713 5.2e-25 118.2 320 34.7
BcaC06g31064 Brassica carinata HOM05D003254 ORTHO05D003713 5.2e-25 118.2 321 34.0
SalBow2G2862 Salvia bowleyana HOM05D003254 ORTHO05D003713 5.2e-25 118.2 318 34.3
TPR.G17752 Trifolium pratense HOM05D003254 ORTHO05D003713 5.2e-25 118.2 322 35.1
BcaC06g33902 Brassica carinata HOM05D003254 ORTHO05D003713 6.8e-25 117.9 321 34.0
C07p35550 Brassica napus HOM05D003254 ORTHO05D003713 6.8e-25 117.9 321 34.0
BolC7t44079H Brassica oleracea HOM05D003254 ORTHO05D003713 6.8e-25 117.9 321 34.0
Peaxi162Scf00076g00027 Petunia axillaris HOM05D003254 ORTHO05D003713 6.8e-25 117.9 319 35.1
A06p41920 Brassica napus HOM05D003254 ORTHO05D003713 8.8e-25 117.5 322 33.9
PGR102G1504 Punica granatum HOM05D003254 ORTHO05D003713 8.8e-25 117.5 327 35.2
Cpa.g.sc33.20 Carica papaya HOM05D003254 ORTHO05D003713 1.2e-24 117.1 322 34.8
Lalb_Chr05g0216571 Lupinus albus HOM05D003254 ORTHO05D003713 1.2e-24 117.1 322 34.5
Rhsim12G0110200 Rhododendron simsii HOM05D003254 ORTHO05D003713 1.2e-24 117.1 319 34.8
Aqoxy3G01213 Aquilegia oxysepala HOM05D003254 ORTHO05D003713 1.5e-24 116.7 322 35.1
ClCG05G025750 Citrullus lanatus HOM05D003254 ORTHO05D003713 1.5e-24 116.7 322 34.5
Nitab4.5_0000007g0040 Nicotiana tabacum HOM05D003254 ORTHO05D003713 1.5e-24 116.7 322 34.5
CAN.G832.1 Capsicum annuum HOM05D003254 ORTHO05D003713 2.0e-24 116.3 321 34.0
Duzib251G0314 Durio zibethinus HOM05D003254 ORTHO05D003713 3.4e-24 115.5 323 34.1
MD16G1102200 Malus domestica HOM05D003254 ORTHO05D003713 3.4e-24 115.5 322 34.5
Cfa009211 Carpinus fangiana HOM05D003254 ORTHO05D003713 4.4e-24 115.2 322 34.5
CiPaw.05G182400 Carya illinoinensis HOM05D003254 ORTHO05D003713 4.4e-24 115.2 322 34.2
Lj4g0008501 Lotus japonicus HOM05D003254 ORTHO05D003713 4.4e-24 115.2 321 34.6
Sc04g0009480 Simmondsia chinensis HOM05D003254 ORTHO05D003713 5.7e-24 114.8 323 34.1
FAN17G2214 Fragaria x ananassa HOM05D003254 ORTHO05D003713 7.5e-24 114.4 320 34.1
Prupe.1G244400 Prunus persica HOM05D003254 ORTHO05D003713 7.5e-24 114.4 322 34.2
Duzib248G0244 Durio zibethinus HOM05D003254 ORTHO05D003713 9.8e-24 114.0 322 34.2
FvH4_4g25560 Fragaria vesca HOM05D003254 ORTHO05D003713 9.8e-24 114.0 320 34.4
CDE07G1933 Ceratophyllum demersum HOM05D003254 ORTHO05D003713 1.7e-23 113.2 323 33.7
MELO3C011950.2 Cucumis melo HOM05D003254 ORTHO05D003713 2.2e-23 112.8 322 34.2
Lsat_1_v5_gn_8_152120 Lactuca sativa HOM05D003254 ORTHO05D003713 2.2e-23 112.8 325 33.5
Lj2g0004909 Lotus japonicus HOM05D003254 ORTHO05D003713 2.2e-23 112.8 320 34.1
PSO478G2352 Papaver somniferum HOM05D003254 ORTHO05D003713 2.2e-23 112.8 321 34.3
THA.LOC104825663 Tarenaya hassleriana HOM05D003254 ORTHO05D003713 2.8e-23 112.5 317 33.8
PSO017G3346 Papaver somniferum HOM05D003254 ORTHO05D003713 3.7e-23 112.1 321 34.3
MSTRG.7932 Avicennia marina HOM05D003254 ORTHO05D003713 4.8e-23 111.7 322 34.2
MD13G1101400 Malus domestica HOM05D003254 ORTHO05D003713 4.8e-23 111.7 322 33.9
arahy.Tifrunner.gnm1.ann1.9P3HYP Arachis hypogaea HOM05D003254 ORTHO05D003713 6.3e-23 111.3 328 32.9
arahy.Tifrunner.gnm1.ann1.E5Z9NB Arachis hypogaea HOM05D003254 ORTHO05D003713 6.3e-23 111.3 328 32.9
CDE04G2624 Ceratophyllum demersum HOM05D003254 ORTHO05D003713 1.4e-22 110.2 323 33.1
PGSC0003DMG400018604 Solanum tuberosum HOM05D003254 ORTHO05D003713 2.4e-22 109.4 322 32.9
Zm00001eb245920 Zea mays HOM05D003254 ORTHO05D003713 3.1e-22 109.0 320 33.8
Sopen05g008390 Solanum pennellii HOM05D003254 ORTHO05D003713 4.1e-22 108.6 321 33.0
Gohir.A03G135300 Gossypium hirsutum HOM05D003254 ORTHO05D003713 5.4e-22 108.2 322 32.9
AUR62024277 Chenopodium quinoa HOM05D003254 ORTHO05D003713 7.0e-22 107.8 328 33.5
Gorai.005G178500 Gossypium raimondii HOM05D003254 ORTHO05D003713 7.0e-22 107.8 322 32.9
RcHm_v2.0_Chr4g0432971 Rosa chinensis HOM05D003254 ORTHO05D003713 7.0e-22 107.8 320 33.4
Thecc.02G259900 Theobroma cacao HOM05D003254 ORTHO05D003713 7.0e-22 107.8 317 33.1
EL10Ac6g13808 Beta vulgaris HOM05D003254 ORTHO05D003713 9.1e-22 107.5 327 33.9
Gohir.D02G158800 Gossypium hirsutum HOM05D003254 ORTHO05D003713 9.1e-22 107.5 322 32.6
CSS0025345 Camellia sinensis var. sinensis HOM05D003254 ORTHO05D003713 1.2e-21 107.1 323 32.8
unitig_747.g21153 Utricularia gibba HOM05D003254 ORTHO05D003713 1.6e-21 106.7 319 33.2
TAR622G0245 Trochodendron aralioides HOM05D003254 ORTHO05D003713 2.0e-21 106.3 116 57.8
vmacro16195 Vaccinium macrocarpon HOM05D003254 ORTHO05D003713 2.0e-21 106.3 322 32.6
AUR62005463 Chenopodium quinoa HOM05D003254 ORTHO05D003713 4.5e-21 105.1 328 33.2
ECA233G5985 Erigeron canadensis HOM05D003254 ORTHO05D003713 4.5e-21 105.1 321 32.1
ATR0824G202 Amborella trichopoda HOM05D003254 ORTHO05D003713 1.0e-20 104.0 319 33.2
Os02g0593500 Oryza sativa ssp. japonica HOM05D003254 ORTHO05D003713 1.0e-20 104.0 320 33.1
COL.COLO4_24275 Corchorus olitorius HOM05D003254 ORTHO05D003713 2.3e-20 102.8 116 56.9
MBI10_g03714_MAGBIO Magnolia biondii HOM05D003254 ORTHO05D003713 2.3e-20 102.8 326 32.2
HPP92_004619 Vanilla planifolia HOM05D003254 ORTHO05D003713 2.3e-20 102.8 316 32.9
Sed0007009 Sechium edule HOM05D003254 ORTHO05D003713 2.9e-20 102.4 116 58.6
Lalb_Chr16g0381911 Lupinus albus HOM05D003254 ORTHO05D003713 5.0e-20 101.7 272 34.2
Ah.03g133020 Amaranthus hybridus HOM05D003254 ORTHO05D003713 8.6e-20 100.9 328 32.6
HanXRQChr08g0208181 Helianthus annuus HOM05D003254 ORTHO05D003713 8.6e-20 100.9 328 31.7
PSO017G4818 Papaver somniferum HOM05D003254 ORTHO05D003713 1.5e-19 100.1 317 33.1
PSO478G3818 Papaver somniferum HOM05D003254 ORTHO05D003713 1.5e-19 100.1 317 33.1
SGA_v2.0_scaffold476G52135 Striga asiatica HOM05D003254 ORTHO05D003713 1.9e-19 99.8 143 53.1
Sabra08G0141400 Salix brachista HOM05D003254 ORTHO05D003713 3.3e-19 99.0 312 33.0
Nitab4.5_0010104g0010 Nicotiana tabacum HOM05D003254 ORTHO05D003713 8.0e-18 94.4 306 33.0
Atru.chr11.2097 Acer truncatum HOM05D003254 ORTHO05D003713 3.0e-17 92.4 128 51.6
SEGI_27895 Sequoiadendron giganteum HOM05D003254 ORTHO05D003713 1.5e-16 90.1 314 29.6
FAN12G0137 Fragaria x ananassa HOM05D003254 ORTHO05D003713 2.8e-15 85.9 310 31.3
FAN22G1441 Fragaria x ananassa HOM05D003254 ORTHO05D003713 2.8e-15 85.9 310 31.3
Mapoly0138s0013 Marchantia polymorpha HOM05D003254 ORTHO05D003713 6.3e-15 84.7 116 49.1
Atru.chr11.2096 Acer truncatum HOM05D003254 ORTHO05D003713 2.4e-14 82.8 105 54.3
AagrBONN_evm.TU.Sc2ySwM_368.1920 Anthoceros agrestis HOM05D003254 ORTHO05D003713 2.4e-14 82.8 71 66.2
Pp3c9_7350 Physcomitrium patens HOM05D003254 ORTHO05D003713 4.1e-14 82.0 71 64.8
BcaC06g33901 Brassica carinata HOM05D003254 ORTHO05D003713 5.4e-14 81.6 56 83.9
CBR_g9141 Chara braunii HOM05D003254 ORTHO05D003713 5.4e-14 81.6 135 41.5
TAR622G1180 Trochodendron aralioides HOM05D003254 ORTHO05D003713 2.0e-13 79.7 105 53.3
CSS0004236 Camellia sinensis var. sinensis HOM05D003254 ORTHO05D003713 2.7e-13 79.3 105 51.4
SMO118G0341 Selaginella moellendorffii HOM05D003254 ORTHO05D003713 2.7e-13 79.3 143 44.8
SEGI_17608 Sequoiadendron giganteum HOM05D003254 ORTHO05D003713 8.6e-12 74.3 136 44.9
HPP92_004613 Vanilla planifolia HOM05D003254 ORTHO05D003713 1.9e-11 73.2 101 50.5
Solyc05g013510.4 Solanum lycopersicum HOM05D003254 ORTHO05D003713 4.3e-11 72.0 105 47.6
TAR629G1948 Trochodendron aralioides HOM05D003254 ORTHO05D003713 2.6e-08 62.8 58 65.5


User provided reference genes

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