Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 3.4e-116 421.8 230 100.0
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 5.2e-40 168.7 220 47.3
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 2.2e-38 163.3 214 49.1
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 4.9e-38 162.2 220 46.4
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 4.9e-38 162.2 225 45.8
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 3.2e-37 159.5 213 47.9
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 4.6e-36 155.6 217 45.6
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 4.6e-36 155.6 213 44.1
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 7.8e-36 154.8 206 48.5
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 1.7e-35 153.7 210 44.8
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 3.0e-35 152.9 232 45.3
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 3.0e-35 152.9 213 41.8
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 3.9e-35 152.5 228 41.7
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 3.9e-35 152.5 228 45.2
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.1e-34 151.0 231 44.6
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.9e-34 150.2 214 44.4
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 2.5e-34 149.8 203 47.3
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 2.5e-34 149.8 213 44.1
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 2.5e-34 149.8 230 44.8
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 2.5e-34 149.8 213 40.8
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 5.6e-34 148.7 203 46.8
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 5.6e-34 148.7 213 40.4
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 7.3e-34 148.3 218 45.4
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 7.3e-34 148.3 215 43.3
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 9.5e-34 147.9 241 41.5
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 9.5e-34 147.9 216 42.6
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 1.2e-33 147.5 222 42.3
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 2.8e-33 146.4 214 43.0
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 3.6e-33 146.0 213 43.2
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 4.7e-33 145.6 235 43.8
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 6.2e-33 145.2 213 47.9
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 8.1e-33 144.8 243 40.7
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 1.1e-32 144.4 197 48.2
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 1.8e-32 143.7 234 40.6
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 2.4e-32 143.3 249 40.6
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 2.4e-32 143.3 230 42.6
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 4.0e-32 142.5 220 41.4
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 1.2e-31 141.0 226 41.6
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 1.5e-31 140.6 223 42.6
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.6e-31 139.8 218 40.4
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 3.4e-31 139.4 211 40.3
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 3.4e-31 139.4 226 39.4
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 4.4e-31 139.0 233 39.1
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 5.8e-31 138.7 220 40.5
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 5.8e-31 138.7 220 45.5
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 9.9e-31 137.9 257 40.9
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.7e-30 137.1 229 38.9
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 2.2e-30 136.7 229 42.8
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 2.2e-30 136.7 179 46.9
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 3.8e-30 136.0 208 40.9
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 3.8e-30 136.0 230 40.9
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 4.9e-30 135.6 217 41.5
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 8.4e-30 134.8 222 41.0
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 1.1e-29 134.4 215 40.5
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.4e-29 134.0 222 40.5
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.9e-29 133.7 227 39.6
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.4e-29 133.3 222 40.5
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 3.2e-29 132.9 211 38.4
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 4.2e-29 132.5 212 41.5
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 4.2e-29 132.5 223 41.3
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 5.4e-29 132.1 210 37.1
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 7.1e-29 131.7 215 40.9
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 1.2e-28 131.0 228 43.0
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.6e-28 130.6 223 40.8
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.6e-28 130.6 227 41.0
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 2.7e-28 129.8 228 43.0
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 6.0e-28 128.6 228 41.2
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 7.8e-28 128.3 221 37.1
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 1.7e-27 127.1 230 41.7
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 3.9e-27 125.9 228 38.6
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 5.1e-27 125.6 206 42.7
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 6.6e-27 125.2 197 45.2
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 6.6e-27 125.2 218 42.2
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 6.6e-27 125.2 229 39.3
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.1e-26 124.4 209 40.7
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 1.1e-26 124.4 199 40.2
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 1.5e-26 124.0 217 43.8
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 1.9e-26 123.6 221 37.1
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 4.3e-26 122.5 190 41.6
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 5.6e-26 122.1 223 39.0
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.8e-25 119.8 223 39.0
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 1.8e-24 117.1 188 42.0
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 2.4e-24 116.7 112 54.5
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.4e-24 116.7 181 43.1
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 9.0e-24 114.8 229 37.6
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 9.0e-24 114.8 137 50.4
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 2.0e-23 113.6 203 43.3
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 4.4e-23 112.5 174 46.0
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.7e-22 110.5 176 42.0
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 6.4e-22 108.6 215 35.3
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 4.2e-21 105.9 125 48.0
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 1.3e-19 100.9 161 44.1
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 1.5e-18 97.4 229 37.1
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 3.3e-18 96.3 227 34.8
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 3.3e-18 96.3 179 37.4
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 3.3e-18 96.3 227 34.8
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 2.1e-17 93.6 227 34.4
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 2.8e-17 93.2 229 35.8
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.1e-16 91.3 221 33.5
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.1e-16 91.3 197 39.1
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 1.4e-16 90.9 229 36.7
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 1.4e-16 90.9 229 36.7
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 1.4e-16 90.9 229 36.7
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 1.8e-16 90.5 228 36.8
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.4e-16 90.1 220 33.2
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 4.0e-16 89.4 241 35.3
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 5.3e-16 89.0 212 34.0
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 9.0e-16 88.2 225 33.8
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 9.0e-16 88.2 198 34.3
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.2e-15 87.8 181 36.5
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 2.6e-15 86.7 229 33.2
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.6e-15 86.7 227 33.9
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.3e-14 84.3 224 33.0
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 1.7e-14 84.0 115 45.2
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.1e-13 81.3 180 36.1
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 3.2e-13 79.7 121 42.1
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 4.2e-13 79.3 223 33.2
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 4.2e-13 79.3 212 34.4
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 7.1e-13 78.6 203 30.0
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.2e-12 77.8 201 34.3
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 2.1e-12 77.0 116 41.4
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 2.1e-12 77.0 170 35.3
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 7.9e-12 75.1 137 39.4
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.0e-11 74.7 232 28.9
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 1.3e-11 74.3 103 43.7
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.1e-10 71.2 239 32.2
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 4.3e-10 69.3 227 33.5
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 6.2e-09 65.5 240 29.6
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 5.3e-08 62.4 153 30.7
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 2.0e-07 60.5 114 35.1


User provided reference genes

Program Settings