Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 6.2e-35 150.2 74 100.0
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 8.4e-32 139.8 74 90.5
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.9e-31 138.7 74 89.2
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 3.2e-31 137.9 74 87.8
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 7.1e-31 136.7 74 87.8
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 7.1e-31 136.7 74 86.5
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.6e-30 135.6 71 88.7
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 1.6e-30 135.6 71 88.7
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 1.6e-30 135.6 71 88.7
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 2.1e-30 135.2 74 85.1
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 2.1e-30 135.2 74 91.9
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 2.1e-30 135.2 74 86.5
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 3.5e-30 134.4 74 85.1
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 4.6e-30 134.0 74 83.8
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 4.6e-30 134.0 74 85.1
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 6.0e-30 133.7 74 83.8
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 6.0e-30 133.7 74 85.1
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 6.0e-30 133.7 74 83.8
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 7.8e-30 133.3 74 83.8
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 1.0e-29 132.9 74 83.8
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 1.0e-29 132.9 74 83.8
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 1.3e-29 132.5 74 85.1
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 1.3e-29 132.5 74 85.1
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 1.3e-29 132.5 70 87.1
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 1.3e-29 132.5 74 82.4
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 1.7e-29 132.1 72 86.1
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 2.3e-29 131.7 74 89.2
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 2.3e-29 131.7 74 82.4
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 2.3e-29 131.7 71 90.1
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.3e-29 131.7 74 82.4
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 3.9e-29 131.0 74 89.2
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 3.9e-29 131.0 74 82.4
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 5.1e-29 130.6 74 81.1
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 5.1e-29 130.6 74 83.8
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 6.6e-29 130.2 71 83.1
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 6.6e-29 130.2 71 83.1
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 6.6e-29 130.2 71 83.1
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 6.6e-29 130.2 71 83.1
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 6.6e-29 130.2 71 83.1
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 6.6e-29 130.2 71 83.1
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 6.6e-29 130.2 71 83.1
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 6.6e-29 130.2 71 83.1
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 6.6e-29 130.2 71 83.1
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 8.7e-29 129.8 74 83.8
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 8.7e-29 129.8 74 81.1
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 8.7e-29 129.8 74 79.7
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 1.5e-28 129.0 74 87.8
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 1.9e-28 128.6 71 81.7
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 1.9e-28 128.6 71 81.7
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 2.5e-28 128.3 71 81.7
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 2.5e-28 128.3 71 81.7
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 2.5e-28 128.3 71 81.7
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 2.5e-28 128.3 71 81.7
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 2.5e-28 128.3 70 85.7
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 2.5e-28 128.3 71 81.7
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 2.5e-28 128.3 74 81.1
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 2.5e-28 128.3 69 85.5
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 2.5e-28 128.3 70 84.3
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 3.3e-28 127.9 69 85.5
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 3.3e-28 127.9 70 85.7
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 3.3e-28 127.9 70 85.7
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 3.3e-28 127.9 74 82.4
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 3.3e-28 127.9 74 81.1
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 4.3e-28 127.5 71 80.3
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 4.3e-28 127.5 71 81.7
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 5.6e-28 127.1 70 84.3
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 5.6e-28 127.1 70 84.3
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 5.6e-28 127.1 69 85.5
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 5.6e-28 127.1 70 84.3
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 5.6e-28 127.1 70 81.4
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 5.6e-28 127.1 74 78.4
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 5.6e-28 127.1 70 84.3
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 7.3e-28 126.7 69 84.1
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 7.3e-28 126.7 71 80.3
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 9.6e-28 126.3 70 84.3
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 9.6e-28 126.3 68 83.8
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.3e-27 125.9 69 84.1
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.3e-27 125.9 69 84.1
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.3e-27 125.9 69 84.1
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 1.3e-27 125.9 74 82.4
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 1.6e-27 125.6 74 79.7
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 1.6e-27 125.6 71 80.3
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 4.8e-27 124.0 70 81.4
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 6.2e-27 123.6 70 81.4
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 6.2e-27 123.6 66 86.4
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 6.2e-27 123.6 74 79.7
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 6.2e-27 123.6 71 81.7
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 8.1e-27 123.2 74 75.7
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 1.1e-26 122.9 70 80.0
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 1.4e-26 122.5 71 78.9
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 4.0e-26 120.9 68 82.4
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 4.0e-26 120.9 71 80.3
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 1.5e-25 119.0 73 78.1
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.1e-23 112.8 56 96.4
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 1.6e-22 109.0 71 69.0
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 1.6e-22 109.0 67 73.1
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 3.9e-21 104.4 67 67.2
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 2.1e-19 98.6 51 88.2
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 6.2e-19 97.1 67 64.2
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 2.4e-18 95.1 66 68.2
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 7.6e-17 90.1 68 63.2
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 2.2e-16 88.6 74 62.2
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 1.3e-13 79.3 52 73.1
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 1.2e-09 66.2 38 81.6


User provided reference genes

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