Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 1.7e-202 709.1 363 100.0
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 3.1e-39 166.8 372 34.4
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.3e-37 161.4 381 34.4
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.5e-36 157.1 410 33.2
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.6e-33 147.1 465 29.5
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 1.4e-31 141.4 371 29.9
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 9.1e-31 138.7 371 30.5
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 3.8e-29 133.3 402 30.3
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 5.0e-29 132.9 408 33.1
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 8.6e-29 132.1 401 30.4
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 1.9e-28 131.0 406 29.3
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 3.3e-28 130.2 378 31.0
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 7.2e-28 129.0 378 31.2
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 2.1e-27 127.5 412 31.1
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 6.1e-27 125.9 407 30.7
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 1.0e-26 125.2 402 31.6
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 2.3e-26 124.0 378 31.7
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 4.0e-26 123.2 417 31.9
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.2e-25 121.7 384 31.5
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.5e-25 121.3 411 29.4
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.0e-25 120.9 377 30.0
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 2.0e-25 120.9 376 30.6
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 4.4e-25 119.8 364 31.9
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 4.4e-25 119.8 391 29.4
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 5.7e-25 119.4 189 42.9
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 7.5e-25 119.0 388 30.9
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 1.7e-24 117.9 408 30.4
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 1.7e-24 117.9 377 30.0
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 4.9e-24 116.3 142 49.3
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 4.9e-24 116.3 369 29.5
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 6.3e-24 115.9 408 30.1
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 4.1e-23 113.2 186 39.8
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 5.4e-23 112.8 425 29.2
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 7.0e-23 112.5 382 30.1
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 7.0e-23 112.5 400 30.8
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 7.0e-23 112.5 413 27.6
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 9.2e-23 112.1 400 29.2
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 9.2e-23 112.1 371 29.9
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 1.2e-22 111.7 137 47.4
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.2e-22 111.7 137 47.4
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 1.6e-22 111.3 391 30.4
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.6e-22 111.3 137 46.7
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.6e-22 111.3 137 46.7
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 1.6e-22 111.3 171 39.8
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 2.0e-22 110.9 370 30.5
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 4.5e-22 109.8 372 29.6
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 4.5e-22 109.8 372 29.6
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 5.9e-22 109.4 171 40.4
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 7.8e-22 109.0 373 29.0
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 3.9e-21 106.7 176 39.8
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 6.6e-21 105.9 185 37.3
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 8.6e-21 105.5 380 28.9
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 8.6e-21 105.5 417 26.9
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.9e-20 104.4 357 30.3
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 1.9e-20 104.4 194 41.2
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 2.5e-20 104.0 396 27.8
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 2.5e-20 104.0 205 34.1
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 2.5e-20 104.0 365 28.2
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 3.3e-20 103.6 357 30.3
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 4.3e-20 103.2 373 28.2
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 4.3e-20 103.2 388 27.6
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.3e-20 103.2 181 40.9
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 9.5e-20 102.1 388 29.9
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 9.5e-20 102.1 181 40.3
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 1.2e-19 101.7 195 35.9
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 1.6e-19 101.3 387 27.9
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 1.6e-19 101.3 436 28.9
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 1.6e-19 101.3 186 37.1
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 2.1e-19 100.9 420 28.8
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 2.1e-19 100.9 161 41.0
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 2.1e-19 100.9 190 39.5
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 3.6e-19 100.1 142 43.0
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 6.1e-19 99.4 386 27.5
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 6.1e-19 99.4 426 28.4
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 1.0e-18 98.6 374 29.9
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 1.8e-18 97.8 369 28.7
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 2.3e-18 97.4 243 30.9
CSS0025538 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.1e-18 97.1 345 29.9
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 3.1e-18 97.1 183 37.7
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 3.1e-18 97.1 377 29.2
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 5.2e-18 96.3 369 28.5
CSS0029870 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 6.8e-18 95.9 345 29.9
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 6.8e-18 95.9 392 26.0
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 6.8e-18 95.9 416 29.6
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 1.2e-17 95.1 369 29.0
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 1.5e-17 94.7 405 26.4
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 1.5e-17 94.7 391 27.6
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 2.0e-17 94.4 422 26.1
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 2.0e-17 94.4 294 30.6
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 5.8e-17 92.8 371 29.1
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 9.8e-17 92.0 430 27.4
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.3e-16 91.7 296 31.4
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 1.3e-16 91.7 419 27.4
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 2.9e-16 90.5 137 38.0
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 2.9e-16 90.5 325 28.0
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 3.7e-16 90.1 376 28.5
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 3.7e-16 90.1 366 26.5
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.9e-16 89.7 371 28.3
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 4.9e-16 89.7 359 28.7
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 6.4e-16 89.4 174 36.8
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 8.3e-16 89.0 161 37.9
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 1.1e-15 88.6 419 30.3
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 1.4e-15 88.2 410 26.1
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 1.9e-15 87.8 294 32.3
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 1.9e-15 87.8 382 28.0
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.4e-15 87.4 401 25.7
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 5.4e-15 86.3 418 27.0
Sp6g20330 Schrenkiella parvula HOM05D011448 ORTHO05D003520 7.0e-15 85.9 136 38.2
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 9.2e-15 85.5 371 28.3
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 1.2e-14 85.1 413 26.9
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 2.0e-14 84.3 154 33.8
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.7e-14 84.0 409 25.7
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 4.6e-14 83.2 132 42.4
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 4.6e-14 83.2 187 36.4
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 1.3e-13 81.6 404 26.0
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 2.3e-13 80.9 362 26.8
Lalb_Chr12g0207011 Lupinus albus HOM05D003726 ORTHO05D003520 2.3e-13 80.9 136 39.7
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 2.3e-13 80.9 427 24.6
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 5.0e-13 79.7 406 28.1
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 6.6e-13 79.3 172 39.0
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 6.6e-13 79.3 172 39.0
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 8.6e-13 79.0 396 25.8
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 8.6e-13 79.0 382 27.0
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 1.5e-12 78.2 419 26.7
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 1.5e-12 78.2 129 41.1
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 1.9e-12 77.8 388 27.6
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 1.9e-12 77.8 384 26.0
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 2.5e-12 77.4 431 24.8
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 2.5e-12 77.4 398 26.1
THA.LOC104816197 Tarenaya hassleriana HOM05D013727 ORTHO05D003520 2.5e-12 77.4 424 26.4
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 7.3e-12 75.9 411 24.6
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.2e-11 75.1 392 28.3
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 1.6e-11 74.7 396 25.5
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 1.6e-11 74.7 403 24.3
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 2.1e-11 74.3 398 27.6
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 3.6e-11 73.6 369 26.3
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 6.2e-11 72.8 398 27.1
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 8.0e-11 72.4 369 25.7
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 8.0e-11 72.4 387 25.6
CDE04G1884 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 1.8e-10 71.2 171 33.3
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 1.8e-10 71.2 423 27.2
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.3e-10 70.9 352 26.1
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 2.3e-10 70.9 379 25.1
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 3.1e-10 70.5 167 32.3
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.0e-10 70.1 369 25.5
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 4.0e-10 70.1 400 26.8
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 4.0e-10 70.1 394 26.4
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 5.2e-10 69.7 377 25.7
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 6.8e-10 69.3 436 25.5
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 1.5e-09 68.2 407 26.8
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 3.4e-09 67.0 254 28.7
CARHR272490 Cardamine hirsuta HOM05D011448 ORTHO05D003520 7.5e-09 65.9 357 25.8
AUR62030799 Chenopodium quinoa HOM05D029928 ORTHO05D003520 7.5e-09 65.9 193 31.1
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 1.3e-08 65.1 379 24.5
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 1.7e-08 64.7 404 23.8
arahy.Tifrunner.gnm1.ann1.71KX3G Arachis hypogaea HOM05D003726 ORTHO05D003520 2.2e-08 64.3 185 30.3
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 2.2e-08 64.3 414 24.9
CDE08G1412 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 3.7e-08 63.5 181 29.8
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 3.7e-08 63.5 389 25.2
arahy.Tifrunner.gnm1.ann1.142K7L Arachis hypogaea HOM05D003726 ORTHO05D003520 6.4e-08 62.8 185 29.7
Thhalv10015324m.g Eutrema salsugineum HOM05D011448 ORTHO05D003520 6.4e-08 62.8 374 23.3
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 6.4e-08 62.8 392 25.5
AL8G34900 Arabidopsis lyrata HOM05D011448 ORTHO05D003520 4.1e-07 60.1 377 23.6
BcaC04g19824 Brassica carinata HOM05D011448 ORTHO05D003520 5.4e-07 59.7 357 26.3
BolC9t57921H Brassica oleracea HOM05D011448 ORTHO05D003520 5.4e-07 59.7 357 26.3
A10p15630 Brassica napus HOM05D011448 ORTHO05D003520 1.2e-06 58.5 351 24.5
BolC2t06018H Brassica oleracea HOM05D013727 ORTHO05D003520 3.5e-06 57.0 191 30.4
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 3.5e-06 57.0 376 25.3


User provided reference genes

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