Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 2.9e-166 588.6 310 100.0
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 8.5e-78 294.7 323 52.3
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 3.0e-75 286.2 327 51.4
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 5.7e-74 282.0 330 50.6
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 9.7e-74 281.2 321 52.0
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.1e-72 277.7 322 50.6
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 1.2e-71 274.2 322 49.1
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 5.9e-71 271.9 333 48.3
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 1.5e-66 257.3 319 47.6
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 5.7e-66 255.4 312 47.1
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 5.7e-66 255.4 319 48.3
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 5.7e-66 255.4 319 49.5
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 7.5e-66 255.0 321 46.4
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 7.5e-66 255.0 326 45.7
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 3.7e-65 252.7 313 49.5
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 8.3e-65 251.5 326 45.1
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 1.1e-64 251.1 322 48.1
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 2.0e-63 246.9 320 47.5
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 4.5e-63 245.7 311 49.5
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 1.3e-62 244.2 317 46.1
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 5.0e-62 242.3 322 47.5
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 6.5e-62 241.9 317 46.1
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 8.6e-62 241.5 315 46.7
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 1.1e-61 241.1 335 45.7
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 5.5e-61 238.8 321 44.2
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 7.2e-61 238.4 314 48.7
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 2.1e-60 236.9 328 45.1
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 2.8e-60 236.5 310 45.2
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 4.7e-60 235.7 319 47.6
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 1.4e-59 234.2 314 47.8
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 2.3e-59 233.4 320 44.7
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 2.3e-59 233.4 318 45.3
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 3.0e-59 233.0 321 45.5
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 3.0e-59 233.0 308 46.8
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 4.0e-59 232.6 319 44.5
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 5.2e-59 232.3 331 44.7
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 5.2e-59 232.3 304 45.1
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 1.2e-58 231.1 313 43.5
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 1.5e-58 230.7 305 44.9
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.5e-58 230.7 316 46.5
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 2.6e-58 229.9 321 43.9
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 2.6e-58 229.9 320 45.3
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 3.4e-58 229.6 318 44.3
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 5.7e-58 228.8 308 42.9
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 9.8e-58 228.0 312 42.9
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 9.8e-58 228.0 312 45.2
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 1.7e-57 227.3 312 43.9
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 2.2e-57 226.9 318 44.7
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 2.2e-57 226.9 313 43.5
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 2.8e-57 226.5 314 46.5
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 4.9e-57 225.7 318 45.3
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 8.3e-57 224.9 334 43.4
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 8.3e-57 224.9 319 44.5
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.4e-56 224.2 310 44.2
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 4.1e-56 222.6 311 42.1
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 5.4e-56 222.2 312 44.6
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 7.0e-56 221.9 334 41.3
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 9.2e-56 221.5 317 44.8
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 9.2e-56 221.5 320 42.8
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 1.2e-55 221.1 309 44.7
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 4.5e-55 219.2 310 43.5
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 4.5e-55 219.2 310 43.2
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 2.3e-54 216.9 309 45.3
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 2.3e-54 216.9 310 43.5
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 2.3e-54 216.9 310 42.9
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 2.9e-54 216.5 335 42.4
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 6.6e-54 215.3 312 44.6
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 8.6e-54 214.9 303 43.6
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.1e-53 214.5 312 44.6
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.9e-53 213.8 314 42.4
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 2.5e-53 213.4 321 41.7
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 1.6e-52 210.7 315 42.9
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.6e-52 210.7 315 42.9
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 1.6e-52 210.7 304 42.1
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 3.6e-52 209.5 312 42.0
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 4.7e-52 209.1 314 41.7
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 6.1e-52 208.8 315 42.9
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 1.0e-51 208.0 313 40.3
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 1.0e-51 208.0 321 41.7
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 1.8e-51 207.2 314 40.4
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.3e-51 206.8 312 44.2
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 4.0e-51 206.1 310 42.9
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 2.6e-50 203.4 300 44.3
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 7.5e-50 201.8 299 42.1
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 4.9e-49 199.1 317 42.6
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 3.2e-48 196.4 202 53.0
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 7.0e-48 195.3 312 42.3
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 1.6e-47 194.1 326 39.9
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 4.6e-47 192.6 310 43.2
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 6.0e-47 192.2 314 39.2
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 1.7e-46 190.7 273 43.6
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 3.9e-46 189.5 316 41.8
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 3.3e-45 186.4 303 39.9
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 2.8e-44 183.3 317 37.5
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 1.4e-43 181.0 322 39.4
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 4.4e-42 176.0 307 38.1
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 6.4e-41 172.2 241 42.7
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 3.5e-39 166.4 305 38.7
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 1.0e-38 164.9 187 48.1
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 1.7e-38 164.1 301 39.9
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 3.0e-38 163.3 311 37.9
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 3.5e-31 139.8 182 44.5
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 3.3e-29 133.3 394 29.7
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 3.1e-27 126.7 296 35.8
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 8.9e-27 125.2 311 34.4
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 1.2e-26 124.8 343 34.1
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 5.8e-26 122.5 305 32.5
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 3.8e-25 119.8 165 46.1
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 4.3e-21 106.3 308 31.2
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 3.8e-17 93.2 135 41.5
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 2.4e-16 90.5 388 25.3
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 7.1e-16 89.0 357 26.9
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 1.0e-14 85.1 183 36.1
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 1.6e-12 77.8 256 29.7
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 5.3e-11 72.8 86 43.0
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 6.9e-11 72.4 73 53.4
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 2.2e-09 67.4 124 36.3
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 4.9e-09 66.2 112 42.0


User provided reference genes

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