Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 1.1e-29 132.5 63 100.0
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 1.4e-24 115.5 58 91.4
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 1.4e-24 115.5 58 91.4
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 1.6e-23 112.1 59 83.1
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 2.7e-23 111.3 58 86.2
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 3.5e-23 110.9 55 90.9
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 3.5e-23 110.9 56 92.9
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 6.0e-23 110.2 55 89.1
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.9e-23 109.8 63 84.1
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.9e-23 109.8 63 84.1
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.9e-23 109.8 63 84.1
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 7.9e-23 109.8 63 84.1
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 7.9e-23 109.8 63 84.1
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 7.9e-23 109.8 63 84.1
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 1.3e-22 109.0 55 87.3
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.3e-22 109.0 55 89.1
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 1.8e-22 108.6 55 87.3
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 3.0e-22 107.8 55 87.3
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 3.9e-22 107.5 55 89.1
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 3.9e-22 107.5 56 85.7
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 5.1e-22 107.1 55 85.5
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 6.7e-22 106.7 54 90.7
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 6.7e-22 106.7 52 94.2
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 6.7e-22 106.7 55 89.1
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 6.7e-22 106.7 55 89.1
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 6.7e-22 106.7 55 85.5
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 8.7e-22 106.3 56 87.5
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 8.7e-22 106.3 56 87.5
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 1.1e-21 105.9 52 90.4
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 1.5e-21 105.5 60 83.3
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 1.5e-21 105.5 54 88.9
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 1.5e-21 105.5 54 88.9
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 1.9e-21 105.1 52 90.4
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 1.9e-21 105.1 60 81.7
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 1.9e-21 105.1 54 90.7
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 1.9e-21 105.1 59 81.4
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 1.9e-21 105.1 54 87.0
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 2.5e-21 104.8 54 88.9
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 3.3e-21 104.4 59 84.7
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 3.3e-21 104.4 55 89.1
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 3.3e-21 104.4 59 84.7
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 3.3e-21 104.4 59 84.7
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 4.3e-21 104.0 56 87.5
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 4.3e-21 104.0 54 85.2
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 4.3e-21 104.0 54 85.2
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 4.3e-21 104.0 54 85.2
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 4.3e-21 104.0 54 85.2
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 4.3e-21 104.0 54 85.2
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 5.7e-21 103.6 54 85.2
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 5.7e-21 103.6 52 88.5
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 5.7e-21 103.6 60 78.3
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 7.4e-21 103.2 56 83.9
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 1.3e-20 102.4 58 82.8
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 1.3e-20 102.4 55 83.6
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 1.6e-20 102.1 59 81.4
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 1.6e-20 102.1 52 88.5
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 1.6e-20 102.1 52 88.5
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 2.1e-20 101.7 54 83.3
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 2.8e-20 101.3 54 85.2
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 6.3e-20 100.1 55 81.8
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 6.3e-20 100.1 54 83.3
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 8.2e-20 99.8 55 81.8
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 8.2e-20 99.8 59 79.7
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 8.2e-20 99.8 59 79.7
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 8.2e-20 99.8 59 79.7
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 2.4e-19 98.2 63 77.8
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 2.4e-19 98.2 63 77.8
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 2.4e-19 98.2 63 77.8
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 3.1e-19 97.8 54 83.3
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 3.1e-19 97.8 54 83.3
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 3.1e-19 97.8 54 83.3
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 3.1e-19 97.8 54 83.3
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 3.1e-19 97.8 54 83.3
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 3.1e-19 97.8 54 83.3
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 3.1e-19 97.8 54 83.3
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 3.1e-19 97.8 54 83.3
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 3.1e-19 97.8 54 83.3
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 3.1e-19 97.8 54 83.3
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 4.1e-19 97.4 54 81.5
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 5.3e-19 97.1 52 82.7
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 9.0e-19 96.3 52 84.6
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 9.0e-19 96.3 52 84.6
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 1.2e-18 95.9 54 81.5
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 1.2e-18 95.9 54 81.5
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 1.2e-18 95.9 54 81.5
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 1.5e-18 95.5 52 84.6
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 5.9e-18 93.6 52 80.8
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 2.5e-16 88.2 52 76.9
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 2.7e-15 84.7 55 72.7
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 1.0e-14 82.8 55 63.6
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 1.3e-14 82.4 55 69.1
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 1.8e-14 82.0 53 73.6
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 3.0e-14 81.3 55 70.9
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 8.7e-14 79.7 46 80.4
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 9.7e-13 76.3 46 76.1
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 2.9e-09 64.7 39 74.4
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 2.9e-09 64.7 58 53.4
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.5e-08 61.6 31 90.3
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 2.5e-08 61.6 35 80.0
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 3.2e-08 61.2 31 90.3
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 3.2e-08 61.2 31 90.3
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 7.2e-08 60.1 50 48.0
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 7.2e-08 60.1 50 48.0
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 1.2e-07 59.3 35 71.4
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 3.6e-07 57.8 33 81.8
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 6.1e-07 57.0 52 48.1


User provided reference genes

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