Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023907 Daucus carota HOM05D011273 ORTHO05D000309 2.0e-80 302.4 154 100.0
DCAR_028160 Daucus carota HOM05D001383 ORTHO05D000309 1.3e-71 273.1 154 92.2
DCAR_011158 Daucus carota HOM05D001383 ORTHO05D000309 3.9e-39 165.2 152 55.9
DCAR_001034 Daucus carota HOM05D001383 ORTHO05D000309 1.2e-35 153.7 153 52.9
DCAR_029798 Daucus carota HOM05D001383 ORTHO05D000309 1.2e-35 153.7 134 57.5
DCAR_001137 Daucus carota HOM05D001383 ORTHO05D000309 8.4e-34 147.5 143 52.4
DCAR_015948 Daucus carota HOM05D001383 ORTHO05D000309 6.6e-31 137.9 143 53.1
DCAR_029957 Daucus carota HOM05D000089 ORTHO05D000104 7.3e-30 134.4 100 62.0
DCAR_017338 Daucus carota HOM05D001383 ORTHO05D000309 1.8e-28 129.8 108 58.3
DCAR_017237 Daucus carota HOM05D027373 ORTHO05D000309 1.6e-16 90.1 140 38.6
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 3.9e-15 85.5 97 44.3
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 3.9e-15 85.5 97 44.3
DCAR_010559 Daucus carota HOM05D027373 ORTHO05D000309 7.3e-14 81.3 140 36.4
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.7e-10 70.1 109 36.7
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.7e-10 70.1 109 36.7
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.9e-10 69.3 128 32.0
Nitab4.5_0005967g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.9e-10 68.6 115 35.7
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.4e-09 67.0 55 47.3
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.4e-09 66.2 67 40.3
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.2e-09 65.9 65 43.1
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.2e-09 65.5 72 40.3
SGA_v2.0_scaffold10G05216 Striga asiatica HOM05D001383 ORTHO05D000309 5.5e-09 65.1 142 33.8
SGA_v2.0_scaffold13G06336 Striga asiatica HOM05D001383 ORTHO05D000309 5.5e-09 65.1 142 33.8
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 9.3e-09 64.3 50 54.0
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.3e-09 64.3 87 36.8
SGA_v2.0_scaffold14G07112 Striga asiatica HOM05D001383 ORTHO05D000309 1.2e-08 63.9 87 39.1
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 1.6e-08 63.5 59 54.2
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 1.6e-08 63.5 59 54.2
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-08 63.2 93 38.7
BolC2t09463H Brassica oleracea HOM05D007774 ORTHO05D000309 2.1e-08 63.2 59 54.2
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-08 62.8 49 51.0
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-08 62.8 82 40.2
DCAR_017403 Daucus carota HOM05D027571 ORTHO05D000309 2.7e-08 62.8 66 40.9
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.7e-08 62.8 68 38.2
Eucgr.A00901 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.5e-08 62.4 60 45.0
Hma1.2p1_0128F.1_g059990 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.5e-08 62.4 58 43.1
Hma1.2p1_0540F.1_g174690 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.5e-08 62.4 68 38.2
Hma1.2p1_0717F.1_g208200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.5e-08 62.4 68 38.2
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 4.6e-08 62.0 106 37.7
SGA_v2.0_scaffold268G46210 Striga asiatica HOM05D001383 ORTHO05D000309 4.6e-08 62.0 78 41.0
Hma1.2p1_0071F.1_g038200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.0e-08 61.6 73 37.0
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 6.0e-08 61.6 118 34.7
SGA_v2.0_scaffold123G33399 Striga asiatica HOM05D001383 ORTHO05D000309 6.0e-08 61.6 91 37.4
SGA_v2.0_scaffold28G12041 Striga asiatica HOM05D001383 ORTHO05D000309 6.0e-08 61.6 91 37.4
SGA_v2.0_scaffold3G01769 Striga asiatica HOM05D001383 ORTHO05D000309 6.0e-08 61.6 142 30.3
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 7.9e-08 61.2 92 34.8
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 7.9e-08 61.2 59 50.8
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.9e-08 61.2 55 47.3
Eucgr.A01677 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.9e-08 61.2 55 47.3
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.9e-08 61.2 146 26.7
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 7.9e-08 61.2 93 35.5
Prupe.8G073400 Prunus persica HOM05D001383 ORTHO05D000309 7.9e-08 61.2 64 46.9
SGA_v2.0_scaffold152G36801 Striga asiatica HOM05D001383 ORTHO05D000309 7.9e-08 61.2 142 30.3
SGA_v2.0_scaffold148G36478 Striga asiatica HOM05D001383 ORTHO05D000309 1.0e-07 60.8 74 40.5
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-07 60.5 92 33.7
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-07 60.5 95 35.8
CAN.G1288.6 Capsicum annuum HOM05D004040 ORTHO05D000309 1.3e-07 60.5 105 35.2
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-07 60.1 108 35.2
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-07 60.1 108 36.1
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 1.8e-07 60.1 90 41.1
Hma1.2p1_1481F.1_g286180 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.3e-07 59.7 66 42.4
Hma1.2p1_1707F.1_g298530 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.3e-07 59.7 66 42.4
Lsat_1_v5_gn_0_6841 Lactuca sativa HOM05D001383 ORTHO05D000309 2.3e-07 59.7 76 43.4
vmacro15909 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 2.3e-07 59.7 70 35.7
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-07 59.3 88 39.8
HanXRQChr04g0101711 Helianthus annuus HOM05D001383 ORTHO05D000309 3.0e-07 59.3 123 34.1
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 3.9e-07 58.9 108 34.3
DCAR_000258 Daucus carota HOM05D027571 ORTHO05D000309 3.9e-07 58.9 66 39.4
DCAR_018536 Daucus carota HOM05D027571 ORTHO05D000309 3.9e-07 58.9 66 39.4
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 5.1e-07 58.5 87 37.9
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 5.1e-07 58.5 87 40.2
Cfa021206 Carpinus fangiana HOM05D011273 ORTHO05D013289 5.1e-07 58.5 145 29.0
Migut.L00955 Erythranthe guttata HOM05D001383 ORTHO05D000309 5.1e-07 58.5 84 36.9
HanXRQChr02g0055571 Helianthus annuus HOM05D001383 ORTHO05D000309 5.1e-07 58.5 123 34.1
Manes.17G014501 Manihot esculenta HOM05D027373 ORTHO05D000309 5.1e-07 58.5 103 33.0
SGA_v2.0_scaffold157G37387 Striga asiatica HOM05D001383 ORTHO05D000309 6.7e-07 58.2 119 32.8
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 8.7e-07 57.8 58 46.6
CAN.G200.12 Capsicum annuum HOM05D004040 ORTHO05D000309 8.7e-07 57.8 69 37.7
Cfa018419 Carpinus fangiana HOM05D011273 ORTHO05D013289 8.7e-07 57.8 109 31.2
Nitab4.5_0013592g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.7e-07 57.8 84 36.9
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-06 57.4 107 33.6
Cfa012336 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.1e-06 57.4 145 29.0
Cfa012649 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.1e-06 57.4 145 28.3
Lsat_1_v5_gn_4_25260 Lactuca sativa HOM05D001383 ORTHO05D000309 1.5e-06 57.0 55 43.6
Nitab4.5_0001370g0070 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.5e-06 57.0 58 39.7
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-06 56.6 121 34.7
Cfa019640 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.9e-06 56.6 109 31.2
Oeu043460.1 Olea europaea HOM05D001383 ORTHO05D000309 1.9e-06 56.6 74 35.1
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-06 56.2 101 36.6
Hma1.2p1_0512F.1_g169330 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.5e-06 56.2 63 39.7
Lsat_1_v5_gn_4_141301 Lactuca sativa HOM05D001383 ORTHO05D000309 2.5e-06 56.2 55 43.6
SGA_v2.0_scaffold15G07207 Striga asiatica HOM05D001383 ORTHO05D000309 2.5e-06 56.2 115 31.3
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-06 55.8 58 46.6
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-06 55.8 121 34.7
Hma1.2p1_0785F.1_g217480 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.3e-06 55.8 78 34.6
Lsat_1_v5_gn_1_7320 Lactuca sativa HOM05D001383 ORTHO05D000309 3.3e-06 55.8 55 43.6
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 3.3e-06 55.8 103 30.1
Migut.M00684 Erythranthe guttata HOM05D001383 ORTHO05D000309 4.3e-06 55.5 105 30.5
SGA_v2.0_scaffold267G46184 Striga asiatica HOM05D035478 ORTHO05D000309 4.3e-06 55.5 101 30.7
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 4.3e-06 55.5 100 29.0
SGA_v2.0_scaffold54G19529 Striga asiatica HOM05D001383 ORTHO05D000309 4.3e-06 55.5 142 29.6
SGA_v2.0_scaffold80G25824 Striga asiatica HOM05D001383 ORTHO05D000309 4.3e-06 55.5 119 32.8
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 5.6e-06 55.1 122 31.1
Dinv26432 Davidia involucrata HOM05D001383 ORTHO05D000309 5.6e-06 55.1 153 29.4
Oeu026062.1 Olea europaea HOM05D001383 ORTHO05D000309 5.6e-06 55.1 70 35.7
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 5.6e-06 55.1 71 39.4
TPR.G20327 Trifolium pratense HOM05D021621 ORTHO05D030187 5.6e-06 55.1 59 49.2
CAN.G298.38 Capsicum annuum HOM05D004040 ORTHO05D000309 7.4e-06 54.7 60 38.3
Nitab4.5_0000036g0280 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.4e-06 54.7 152 30.3
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 7.4e-06 54.7 57 42.1


User provided reference genes

Program Settings