Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 2.2e-161 572.4 323 100.0
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 9.5e-80 301.2 338 54.4
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 9.6e-48 194.9 316 49.7
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 5.4e-43 179.1 330 43.6
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.6e-42 177.6 335 43.0
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 6.0e-42 175.6 331 44.4
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 6.0e-42 175.6 331 44.4
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.5e-40 171.0 331 43.8
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 1.9e-40 170.6 337 44.5
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 2.5e-40 170.2 344 44.2
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 4.3e-40 169.5 332 45.2
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 1.6e-39 167.5 332 44.3
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 2.8e-39 166.8 350 43.4
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 2.8e-39 166.8 324 46.0
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 2.4e-38 163.7 343 44.9
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 3.1e-38 163.3 330 44.8
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 2.0e-37 160.6 324 45.1
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 2.0e-37 160.6 334 45.5
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 3.4e-37 159.8 336 40.5
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 7.6e-37 158.7 341 42.5
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 9.9e-37 158.3 341 43.1
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 2.9e-36 156.8 345 45.5
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 3.8e-36 156.4 334 43.7
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 4.9e-36 156.0 332 45.8
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 4.9e-36 156.0 339 46.0
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 6.4e-36 155.6 340 45.0
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.9e-35 154.1 329 41.9
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.2e-35 153.3 333 41.1
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 3.2e-35 153.3 326 42.0
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 3.2e-35 153.3 325 43.1
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 4.2e-35 152.9 338 39.9
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 7.1e-35 152.1 328 43.6
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 7.1e-35 152.1 326 39.3
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 7.1e-35 152.1 276 43.1
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 1.2e-34 151.4 337 42.1
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 1.2e-34 151.4 333 41.7
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 4.6e-34 149.4 325 43.4
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 1.0e-33 148.3 342 37.4
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 3.9e-33 146.4 319 43.6
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 6.7e-33 145.6 325 42.2
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 6.7e-33 145.6 322 40.4
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 6.7e-33 145.6 322 40.4
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 8.7e-33 145.2 333 43.2
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.1e-32 144.8 342 40.4
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 1.9e-32 144.1 343 36.4
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 3.3e-32 143.3 338 40.2
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 4.3e-32 142.9 318 41.8
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 4.3e-32 142.9 318 41.8
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 1.6e-31 141.0 322 42.2
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 3.7e-31 139.8 336 43.2
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 6.2e-31 139.0 336 38.7
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 1.1e-30 138.3 343 42.9
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 1.1e-30 138.3 359 39.3
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 3.1e-30 136.7 309 41.4
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 3.1e-30 136.7 322 41.9
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 1.5e-29 134.4 339 42.8
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.5e-29 134.4 324 38.6
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 4.5e-29 132.9 330 43.9
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 5.8e-29 132.5 282 41.8
Lsat_1_v5_gn_4_11700 Lactuca sativa HOM05D004533 ORTHO05D005347 1.3e-28 131.3 334 39.5
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 2.9e-28 130.2 338 39.9
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 6.4e-28 129.0 323 38.7
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 1.9e-27 127.5 349 40.1
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 1.9e-27 127.5 331 37.5
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 3.2e-27 126.7 335 35.2
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.2e-27 126.7 321 39.6
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 4.2e-27 126.3 324 38.3
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 4.2e-27 126.3 300 38.7
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 5.5e-27 125.9 325 39.4
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 7.1e-27 125.6 349 40.4
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 1.2e-26 124.8 335 40.6
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 2.7e-26 123.6 337 38.6
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 6.0e-26 122.5 332 44.0
MBI16_g39936_MAGBIO Magnolia biondii HOM05D004533 ORTHO05D005347 7.9e-26 122.1 330 37.9
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 1.8e-25 120.9 339 36.3
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 1.8e-25 120.9 338 38.8
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 2.3e-25 120.6 355 35.2
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.5e-24 117.9 321 39.3
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 1.3e-23 114.8 329 36.8
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 4.8e-23 112.8 325 38.5
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 4.8e-23 112.8 340 37.4
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 4.8e-23 112.8 328 38.4
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 4.8e-23 112.8 329 38.9
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.1e-22 111.7 325 40.6
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 1.1e-22 111.7 201 43.8
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 1.8e-22 110.9 328 39.0
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 2.4e-22 110.5 357 35.0
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 9.0e-22 108.6 326 40.8
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 9.0e-22 108.6 326 40.8
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 9.0e-22 108.6 363 36.1
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 1.2e-21 108.2 333 38.4
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 2.6e-21 107.1 331 40.8
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.6e-21 107.1 343 37.0
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.6e-21 107.1 343 37.0
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.6e-21 107.1 343 37.0
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 4.5e-21 106.3 326 41.1
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 1.3e-20 104.8 321 35.2
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 2.2e-20 104.0 242 40.9
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 3.8e-20 103.2 319 33.2
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 4.9e-20 102.8 228 43.9
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 6.5e-20 102.4 242 40.5
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 1.1e-19 101.7 331 39.9
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 1.9e-19 100.9 326 41.4
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 2.7e-18 97.1 346 38.2
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 3.5e-18 96.7 330 34.8
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 3.5e-18 96.7 322 33.2
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 4.6e-18 96.3 357 34.5
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 4.6e-18 96.3 333 37.2
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 6.0e-18 95.9 334 38.9
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 7.9e-18 95.5 334 38.0
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 1.3e-17 94.7 331 38.7
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 1.8e-17 94.4 326 35.0
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 3.0e-17 93.6 334 36.2
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 3.0e-17 93.6 336 35.1
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 5.1e-17 92.8 334 35.9
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 8.7e-17 92.0 338 39.1
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 8.7e-17 92.0 335 36.4
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 1.1e-16 91.7 327 37.3
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 1.1e-16 91.7 356 34.0
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 1.1e-16 91.7 335 36.7
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 1.5e-16 91.3 334 36.2
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 1.9e-16 90.9 334 37.1
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 1.9e-16 90.9 334 36.2
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 2.5e-16 90.5 335 36.7
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 2.5e-16 90.5 315 32.4
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 4.3e-16 89.7 335 36.7
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 4.3e-16 89.7 335 36.7
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 4.3e-16 89.7 301 40.5
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 5.7e-16 89.4 335 34.6
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 9.7e-16 88.6 297 36.7
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 9.7e-16 88.6 309 36.9
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 6.3e-15 85.9 155 49.7
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 8.2e-15 85.5 327 31.8
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 1.8e-14 84.3 326 35.9
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 9.0e-14 82.0 321 35.5
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 6.5e-12 75.9 273 42.1
PGR102G1315 Punica granatum HOM05D004533 ORTHO05D005347 2.5e-11 73.9 322 35.7
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 5.5e-11 72.8 328 32.6
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 9.4e-11 72.0 307 38.1
Migut.E00039 Erythranthe guttata HOM05D004533 ORTHO05D005347 6.1e-10 69.3 312 34.9
PSO063G5982 Papaver somniferum HOM05D004533 ORTHO05D005347 1.0e-09 68.6 330 30.9
Nn3g17512 Nelumbo nucifera HOM05D004533 ORTHO05D005347 1.4e-09 68.2 296 34.1
CANSAT64G2295 Cannabis sativa HOM05D004533 ORTHO05D005347 8.8e-09 65.5 376 35.1
PGR119G0103 Punica granatum HOM05D004533 ORTHO05D005347 8.8e-09 65.5 320 32.5
CDE02G4104 Ceratophyllum demersum HOM05D004533 ORTHO05D005347 1.1e-06 58.5 297 26.6
Migut.L01171 Erythranthe guttata HOM05D004533 ORTHO05D005347 1.8e-06 57.8 88 45.5
HPP92_007737 Vanilla planifolia HOM05D004533 ORTHO05D005347 4.1e-06 56.6 103 40.8


User provided reference genes

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