Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 1.4e-69 266.2 130 100.0
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 2.0e-41 172.6 133 67.7
DCAR_006246 Daucus carota HOM05D006722 ORTHO05D007944 1.1e-34 150.2 133 63.2
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 1.5e-23 113.2 126 54.8
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 2.5e-23 112.5 141 48.9
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 7.3e-23 110.9 128 52.3
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 9.5e-23 110.5 121 53.7
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 2.1e-22 109.4 133 50.4
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 5.2e-21 104.8 137 46.7
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 6.4e-19 97.8 132 45.5
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 6.4e-19 97.8 106 55.7
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.2e-17 93.6 124 48.4
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.6e-17 93.2 128 46.9
PGSC0003DMG400018315 Solanum tuberosum HOM05D006722 ORTHO05D007944 7.8e-17 90.9 136 45.6
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.3e-16 90.1 136 43.4
Nitab4.5_0005380g0010 Nicotiana tabacum HOM05D006722 ORTHO05D007944 3.9e-16 88.6 136 44.9
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 6.6e-16 87.8 133 43.6
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 1.5e-15 86.7 144 41.7
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 1.5e-15 86.7 129 44.2
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 7.3e-15 84.3 134 41.8
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 1.3e-14 83.6 139 41.0
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 1.1e-13 80.5 112 42.0
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 1.8e-13 79.7 125 37.6
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 4.0e-13 78.6 138 41.3
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 1.2e-12 77.0 130 40.0
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 1.5e-12 76.6 130 42.3
ATR0693G370 Amborella trichopoda HOM05D041462 ORTHO05D007944 1.5e-12 76.6 130 41.5
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 1.5e-12 76.6 127 47.2
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 2.0e-12 76.3 112 44.6
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 2.6e-12 75.9 121 44.6
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 3.4e-12 75.5 140 39.3
Lsat_1_v5_gn_4_70120 Lactuca sativa HOM05D006722 ORTHO05D007944 3.4e-12 75.5 140 37.9
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 3.4e-12 75.5 124 40.3
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 5.8e-12 74.7 134 40.3
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 9.9e-12 73.9 140 37.9
AT2G20870 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 9.9e-12 73.9 140 37.9
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 1.3e-11 73.6 123 41.5
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 1.7e-11 73.2 119 45.4
Rhsim04G0066600 Rhododendron simsii HOM05D006722 ORTHO05D007944 2.9e-11 72.4 124 41.1
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 6.4e-11 71.2 120 43.3
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 8.4e-11 70.9 128 39.1
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 1.1e-10 70.5 132 40.9
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 1.9e-10 69.7 142 38.0
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 1.9e-10 69.7 123 42.3
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 1.9e-10 69.7 99 46.5
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 1.9e-10 69.7 123 42.3
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 1.9e-10 69.7 123 42.3
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 1.9e-10 69.7 120 42.5
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 2.4e-10 69.3 99 46.5
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 3.2e-10 68.9 130 39.2
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 4.2e-10 68.6 123 38.2
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 9.3e-10 67.4 115 44.3
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 1.6e-09 66.6 138 40.6
Cc05_g06730 Coffea canephora HOM05D006722 ORTHO05D007944 2.1e-09 66.2 122 40.2
Actinidia11069 Actinidia chinensis HOM05D006722 ORTHO05D007944 3.5e-09 65.5 90 44.4
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 6.0e-09 64.7 116 38.8
Glyma.06G296300 Glycine max HOM05D006722 ORTHO05D007944 7.8e-09 64.3 136 39.0
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 1.0e-08 63.9 136 37.5
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 1.0e-08 63.9 131 37.4
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 3.0e-08 62.4 119 40.3
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 3.0e-08 62.4 119 40.3
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 3.9e-08 62.0 130 38.5
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 3.9e-08 62.0 104 43.3
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 3.9e-08 62.0 131 37.4
Medtr2g090185 Medicago truncatula HOM05D006722 ORTHO05D007944 1.1e-07 60.5 137 34.3
Medtr4g037480 Medicago truncatula HOM05D006722 ORTHO05D007944 1.1e-07 60.5 126 38.9
Phvul.011G113200 Phaseolus vulgaris HOM05D006722 ORTHO05D007944 1.1e-07 60.5 155 34.8
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 1.9e-07 59.7 133 35.3
ClCG02G017440 Citrullus lanatus HOM05D006722 ORTHO05D007944 3.3e-07 58.9 123 38.2
SalBow1G4058 Salvia bowleyana HOM05D006722 ORTHO05D007944 3.3e-07 58.9 64 54.7
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 3.3e-07 58.9 137 38.0
Medtr4g037560 Medicago truncatula HOM05D006722 ORTHO05D007944 4.3e-07 58.5 128 38.3
Psat5g270720 Pisum sativum HOM05D006722 ORTHO05D007944 7.3e-07 57.8 136 34.6
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 9.6e-07 57.4 137 35.0
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 2.1e-06 56.2 128 39.8
Sabra13G0116200 Salix brachista HOM05D006722 ORTHO05D007944 2.1e-06 56.2 119 36.1
FAN02G2988 Fragaria x ananassa HOM05D006722 ORTHO05D007944 2.8e-06 55.8 113 39.8
Gohir.D06G117266 Gossypium hirsutum HOM05D006722 ORTHO05D007944 3.6e-06 55.5 125 37.6
QL08p037794 Quercus lobata HOM05D006722 ORTHO05D007944 3.6e-06 55.5 106 39.6
MELO3C013561.2 Cucumis melo HOM05D006722 ORTHO05D007944 8.1e-06 54.3 115 33.9


User provided reference genes

Program Settings