Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023625 Daucus carota HOM05D005619 ORTHO05D006696 1.1e-127 459.9 230 100.0
DCAR_026757 Daucus carota HOM05D005619 ORTHO05D006696 2.7e-73 279.3 150 92.0
Lj3A878T24 Lonicera japonica HOM05D005619 ORTHO05D006696 9.5e-66 254.2 150 81.3
Dinv16155 Davidia involucrata HOM05D005619 ORTHO05D006696 5.7e-63 245.0 150 78.0
Actinidia31994 Actinidia chinensis HOM05D005619 ORTHO05D006696 1.7e-59 233.4 150 73.3
CSS0006168 Camellia sinensis var. sinensis HOM05D005619 ORTHO05D006696 2.3e-59 233.0 150 74.0
Hma1.2p1_2256F.1_g318210 Hydrangea macrophylla HOM05D005619 ORTHO05D006696 6.6e-59 231.5 150 74.7
Oeu057772.1 Olea europaea HOM05D005619 ORTHO05D006696 8.0e-57 224.6 152 71.7
Lsat_1_v5_gn_8_41961 Lactuca sativa HOM05D005619 ORTHO05D006696 1.4e-56 223.8 150 72.7
HanXRQChr15g0468911 Helianthus annuus HOM05D005619 ORTHO05D006696 6.8e-56 221.5 150 71.3
ECA233G2873 Erigeron canadensis HOM05D005619 ORTHO05D006696 1.5e-55 220.3 150 70.7
HanXRQChr08g0213181 Helianthus annuus HOM05D005619 ORTHO05D006696 2.6e-55 219.5 150 70.7
MSTRG.870 Avicennia marina HOM05D005619 ORTHO05D006696 3.4e-55 219.2 152 69.1
HanXRQChr09g0271791 Helianthus annuus HOM05D005619 ORTHO05D006696 9.8e-55 217.6 150 70.0
SGA_v2.0_scaffold170G38815 Striga asiatica HOM05D005619 ORTHO05D006696 1.7e-54 216.9 152 65.8
Sc11g0001040 Simmondsia chinensis HOM05D005619 ORTHO05D006696 4.9e-54 215.3 153 66.7
SalBow8G4625 Salvia bowleyana HOM05D005619 ORTHO05D006696 2.4e-53 213.0 152 65.8
Migut.E00386 Erythranthe guttata HOM05D005619 ORTHO05D006696 4.1e-53 212.2 152 65.8
Peaxi162Scf00451g00930 Petunia axillaris HOM05D005619 ORTHO05D006696 4.1e-53 212.2 152 67.1
ECA247G2146 Erigeron canadensis HOM05D005619 ORTHO05D006696 7.0e-53 211.5 150 68.0
Hund13861 Selenicereus undatus HOM05D005619 ORTHO05D006696 9.2e-53 211.1 148 65.5
TAR633G2706 Trochodendron aralioides HOM05D005619 ORTHO05D006696 9.2e-53 211.1 154 66.9
Cc03_g10740 Coffea canephora HOM05D005619 ORTHO05D006696 2.7e-52 209.5 152 65.8
Cc03_g13530 Coffea canephora HOM05D005619 ORTHO05D006696 7.8e-52 208.0 155 65.8
PGSC0003DMG400030566 Solanum tuberosum HOM05D005619 ORTHO05D006696 7.8e-52 208.0 152 65.8
unitig_52.g17125 Utricularia gibba HOM05D005619 ORTHO05D006696 1.7e-51 206.8 152 63.8
AUR62034382 Chenopodium quinoa HOM05D005619 ORTHO05D006696 2.3e-51 206.5 148 64.2
TAR369G0168 Trochodendron aralioides HOM05D005619 ORTHO05D006696 3.0e-51 206.1 148 67.6
Medtr3g070470 Medicago truncatula HOM05D005619 ORTHO05D006696 3.9e-51 205.7 149 64.4
Solyc05g008620.4 Solanum lycopersicum HOM05D005619 ORTHO05D006696 3.9e-51 205.7 152 65.1
Sopen05g004460 Solanum pennellii HOM05D005619 ORTHO05D006696 3.9e-51 205.7 152 65.1
Aqoxy4G02564 Aquilegia oxysepala HOM05D005619 ORTHO05D006696 8.6e-51 204.5 150 63.3
CAN.G1489.22 Capsicum annuum HOM05D005619 ORTHO05D006696 8.6e-51 204.5 152 65.8
CSS0006460 Camellia sinensis var. sinensis HOM05D005619 ORTHO05D006696 1.1e-50 204.1 150 68.7
AUR62022323 Chenopodium quinoa HOM05D005619 ORTHO05D006696 2.5e-50 203.0 148 63.5
PSO339G2325 Papaver somniferum HOM05D005619 ORTHO05D006696 2.5e-50 203.0 150 60.7
Lj6g0025019 Lotus japonicus HOM05D005619 ORTHO05D006696 4.3e-50 202.2 149 63.8
EL10Ac2g04534 Beta vulgaris HOM05D005619 ORTHO05D006696 7.3e-50 201.4 153 62.7
CsaV3_6G001830 Cucumis sativus L. HOM05D005619 ORTHO05D006696 7.3e-50 201.4 150 65.3
Lj1g0018800 Lotus japonicus HOM05D005619 ORTHO05D006696 9.5e-50 201.1 149 63.1
GSVIVG01032822001 Vitis vinifera HOM05D005619 ORTHO05D006696 2.1e-49 199.9 148 64.9
MBI05_g05306_MAGBIO Magnolia biondii HOM05D005619 ORTHO05D006696 2.8e-49 199.5 148 63.5
Nn2g11500 Nelumbo nucifera HOM05D005619 ORTHO05D006696 4.7e-49 198.7 150 65.3
Sed0003089 Sechium edule HOM05D005619 ORTHO05D006696 8.0e-49 198.0 150 63.3
arahy.Tifrunner.gnm1.ann1.IDH5I9 Arachis hypogaea HOM05D005619 ORTHO05D006696 1.8e-48 196.8 149 62.4
Lalb_Chr03g0027081 Lupinus albus HOM05D005619 ORTHO05D006696 1.8e-48 196.8 149 63.1
arahy.Tifrunner.gnm1.ann1.2YL4XG Arachis hypogaea HOM05D005619 ORTHO05D006696 2.3e-48 196.4 149 61.7
Gohir.A06G163800 Gossypium hirsutum HOM05D005619 ORTHO05D006696 3.1e-48 196.1 148 63.5
Gohir.D06G169500 Gossypium hirsutum HOM05D005619 ORTHO05D006696 3.1e-48 196.1 148 63.5
Gorai.010G198200 Gossypium raimondii HOM05D005619 ORTHO05D006696 3.1e-48 196.1 148 63.5
Thecc.10G016900 Theobroma cacao HOM05D005619 ORTHO05D006696 4.0e-48 195.7 148 63.5
TPR.G16245 Trifolium pratense HOM05D005619 ORTHO05D006696 4.0e-48 195.7 154 61.7
Duzib128G1619 Durio zibethinus HOM05D005619 ORTHO05D006696 5.2e-48 195.3 148 62.8
Psat5g128520 Pisum sativum HOM05D005619 ORTHO05D006696 5.2e-48 195.3 149 61.7
ClCG11G006160 Citrullus lanatus HOM05D005619 ORTHO05D006696 1.2e-47 194.1 150 64.7
Glyma.18G027600 Glycine max HOM05D005619 ORTHO05D006696 1.2e-47 194.1 149 61.7
Glyma.11G229600 Glycine max HOM05D005619 ORTHO05D006696 1.5e-47 193.7 149 61.7
Aqoxy5G02842 Aquilegia oxysepala HOM05D005619 ORTHO05D006696 2.0e-47 193.4 150 60.7
CANSAT56G2799 Cannabis sativa HOM05D005619 ORTHO05D006696 2.0e-47 193.4 148 62.8
Cpa.g.sc19.176 Carica papaya HOM05D005619 ORTHO05D006696 2.0e-47 193.4 148 61.5
Atru.chr12.29 Acer truncatum HOM05D005619 ORTHO05D006696 5.8e-47 191.8 147 61.9
Duzib114G0170 Durio zibethinus HOM05D005619 ORTHO05D006696 5.8e-47 191.8 148 61.5
Manes.04G157300 Manihot esculenta HOM05D005619 ORTHO05D006696 1.3e-46 190.7 148 63.5
Phvul.001G242800 Phaseolus vulgaris HOM05D005619 ORTHO05D006696 1.3e-46 190.7 149 60.4
VMungo1383G0062 Vigna mungo HOM05D005619 ORTHO05D006696 1.3e-46 190.7 148 60.8
AT1G19080 Arabidopsis thaliana HOM05D005619 ORTHO05D006696 1.7e-46 190.3 148 61.5
AT3G55490 Arabidopsis thaliana HOM05D005619 ORTHO05D006696 1.7e-46 190.3 148 61.5
FAN06G3728 Fragaria x ananassa HOM05D005619 ORTHO05D006696 2.2e-46 189.9 149 61.7
AL5G36640 Arabidopsis lyrata HOM05D005619 ORTHO05D006696 2.9e-46 189.5 148 60.8
FvH4_7g24440 Fragaria vesca HOM05D005619 ORTHO05D006696 2.9e-46 189.5 149 61.7
RcHm_v2.0_Chr1g0370121 Rosa chinensis HOM05D005619 ORTHO05D006696 6.4e-46 188.3 149 61.1
FAN01G2425 Fragaria x ananassa HOM05D005619 ORTHO05D006696 8.3e-46 188.0 149 61.1
FAN10G0566 Fragaria x ananassa HOM05D005619 ORTHO05D006696 8.3e-46 188.0 149 61.1
CiPaw.02G192300 Carya illinoinensis HOM05D000781 ORTHO05D000643 1.1e-45 187.6 143 63.6
Sabra08G0050000 Salix brachista HOM05D005619 ORTHO05D006696 1.4e-45 187.2 148 63.5
Potri.008G068100 Populus trichocarpa HOM05D005619 ORTHO05D006696 1.9e-45 186.8 148 62.8
Potri.010G189200 Populus trichocarpa HOM05D005619 ORTHO05D006696 1.9e-45 186.8 148 63.5
CDE04G2394 Ceratophyllum demersum HOM05D005619 ORTHO05D006696 3.2e-45 186.0 145 61.4
Cfa001322 Carpinus fangiana HOM05D005619 ORTHO05D006696 4.1e-45 185.7 143 62.2
Prupe.2G202300 Prunus persica HOM05D005619 ORTHO05D006696 4.1e-45 185.7 148 60.1
Haze_17223 Corylus avellana HOM05D005619 ORTHO05D006696 5.4e-45 185.3 143 62.2
Prupe.2G249700 Prunus persica HOM05D005619 ORTHO05D006696 9.2e-45 184.5 148 59.5
QL08p063145 Quercus lobata HOM05D005619 ORTHO05D006696 9.2e-45 184.5 148 60.8
CiPaw.08G091200 Carya illinoinensis HOM05D005619 ORTHO05D006696 1.2e-44 184.1 142 62.0
MD01G1152600 Malus domestica HOM05D005619 ORTHO05D006696 1.2e-44 184.1 148 60.1
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 2.1e-44 183.3 148 61.5
THA.LOC104824313 Tarenaya hassleriana HOM05D005619 ORTHO05D006696 2.7e-44 183.0 148 60.1
ATR0481G004 Amborella trichopoda HOM05D005619 ORTHO05D006696 3.5e-44 182.6 148 55.4
Thhalv10017287m.g Eutrema salsugineum HOM05D005619 ORTHO05D006696 4.6e-44 182.2 148 60.8
CARHR165540 Cardamine hirsuta HOM05D005619 ORTHO05D006696 3.0e-43 179.5 148 58.1
SalBow8G2997 Salvia bowleyana HOM05D005619 ORTHO05D006696 3.9e-43 179.1 154 59.1
PGR142G0483 Punica granatum HOM05D005619 ORTHO05D006696 5.1e-43 178.7 149 59.1
Carub.0005s2221 Capsella rubella HOM05D005619 ORTHO05D006696 8.6e-43 177.9 148 56.1
HPP92_000355 Vanilla planifolia HOM05D000755 ORTHO05D000642 8.6e-43 177.9 148 58.1
HPP92_000422 Vanilla planifolia HOM05D000755 ORTHO05D006696 8.6e-43 177.9 148 58.1
BcaNung05464 Brassica carinata HOM05D005619 ORTHO05D006696 1.5e-42 177.2 148 59.5
CARHR135030 Cardamine hirsuta HOM05D005619 ORTHO05D006696 1.5e-42 177.2 148 58.8
Ciclev10033435m.g Citrus clementina HOM05D005619 ORTHO05D006696 2.5e-42 176.4 133 60.9
Sp4g22380 Schrenkiella parvula HOM05D005619 ORTHO05D006696 2.5e-42 176.4 148 58.1
Lalb_Chr01g0004131 Lupinus albus HOM05D005619 ORTHO05D006696 7.3e-42 174.9 170 52.9
A04p30090 Brassica napus HOM05D005619 ORTHO05D006696 1.2e-41 174.1 145 58.6
Eucgr.G03057 Eucalyptus grandis HOM05D005619 ORTHO05D006696 1.2e-41 174.1 149 58.4
BraA04t18498Z Brassica rapa HOM05D005619 ORTHO05D006696 1.6e-41 173.7 148 57.4
Os08g0274700 Oryza sativa ssp. japonica HOM05D005619 ORTHO05D006696 2.8e-41 172.9 151 55.6
Zm00001eb412290 Zea mays HOM05D005619 ORTHO05D006696 4.7e-41 172.2 151 56.3
BolC4t28280H Brassica oleracea HOM05D005619 ORTHO05D006696 1.8e-40 170.2 145 57.9
Nitab4.5_0000350g0020 Nicotiana tabacum HOM05D005619 ORTHO05D006696 1.8e-40 170.2 152 57.9
Zm00001eb198650 Zea mays HOM05D005619 ORTHO05D006696 1.8e-40 170.2 151 56.3
SMO356G0622 Selaginella moellendorffii HOM05D005619 ORTHO05D006696 2.3e-40 169.9 150 54.7
BcaC02g07350 Brassica carinata HOM05D005619 ORTHO05D006696 2.0e-39 166.8 147 56.5
TWI53G0619 Tripterygium wilfordii HOM05D005619 ORTHO05D006696 2.0e-39 166.8 131 61.8
C04p67770 Brassica napus HOM05D005619 ORTHO05D006696 2.6e-39 166.4 145 57.2
COL.COLO4_25718 Corchorus olitorius HOM05D005619 ORTHO05D006696 2.2e-38 163.3 148 58.1
FAN06G2505 Fragaria x ananassa HOM05D005619 ORTHO05D006696 4.9e-38 162.2 156 54.5
AagrBONN_evm.TU.Sc2ySwM_228.5247 Anthoceros agrestis HOM05D005619 ORTHO05D006696 2.1e-36 156.8 130 52.3
BcaC02g07392 Brassica carinata HOM05D005619 ORTHO05D006696 6.6e-35 151.8 131 58.8
Mapoly0034s0059 Marchantia polymorpha HOM05D005619 ORTHO05D006696 1.1e-34 151.0 148 48.0
AagrBONN_evm.TU.Sc2ySwM_344.729 Anthoceros agrestis HOM05D005619 ORTHO05D006696 2.5e-34 149.8 150 49.3
Peaxi162Scf00205g01136 Petunia axillaris HOM05D005619 ORTHO05D006696 2.5e-34 149.8 113 64.6
Pp3c25_12660 Physcomitrium patens HOM05D005619 ORTHO05D006696 2.5e-34 149.8 150 48.0
Nitab4.5_0003886g0110 Nicotiana tabacum HOM05D005619 ORTHO05D006696 3.3e-34 149.4 150 52.0
Mapoly0053s0030 Marchantia polymorpha HOM05D005619 ORTHO05D006696 4.3e-34 149.1 148 46.6
CBR_g38120 Chara braunii HOM05D005619 ORTHO05D006696 5.6e-34 148.7 150 45.3
Actinidia33632 Actinidia chinensis HOM05D005619 ORTHO05D006696 2.0e-31 140.2 98 68.4
TWI73G0774 Tripterygium wilfordii HOM05D005619 ORTHO05D006696 2.6e-31 139.8 149 51.0
MELO3C029903.2 Cucumis melo HOM05D005619 ORTHO05D006696 1.9e-29 133.7 161 46.0
Aa31LG5G19540 Aethionema arabicum HOM05D005619 ORTHO05D006696 2.4e-29 133.3 104 59.6
CARHR159370 Cardamine hirsuta HOM05D005619 ORTHO05D006696 3.2e-29 132.9 113 55.8
AagrBONN_evm.TU.Sc2ySwM_344.737 Anthoceros agrestis HOM05D005619 ORTHO05D006696 1.9e-26 123.6 104 54.8
C04p07340 Brassica napus HOM05D004515 ORTHO05D006013 2.8e-25 119.8 97 59.8
Sabra10G0145900 Salix brachista HOM05D005619 ORTHO05D006696 3.6e-25 119.4 148 49.3
HanXRQChr12g0375531 Helianthus annuus HOM05D005619 ORTHO05D006696 1.1e-21 107.8 73 68.5
BolC4t22357H Brassica oleracea HOM05D004515 ORTHO05D006013 7.1e-21 105.1 81 63.0
HanXRQChr01g0017101 Helianthus annuus HOM05D005619 ORTHO05D006696 2.1e-20 103.6 63 74.6
ATR0568G146 Amborella trichopoda HOM05D005619 ORTHO05D006696 8.7e-19 98.2 85 55.3
MCO08G248 Micromonas commoda HOM05D005619 ORTHO05D006696 2.1e-17 93.6 151 35.8
BcaB08g35316 Brassica carinata HOM05D005619 ORTHO05D006696 4.0e-16 89.4 72 55.6
Cre06.g251750 Chlamydomonas reinhardtii HOM05D005619 ORTHO05D006696 5.3e-16 89.0 151 32.5
Cfa027228 Carpinus fangiana HOM05D005619 ORTHO05D006696 1.0e-11 74.7 127 32.3


User provided reference genes

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