Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 5.1e-168 594.3 306 100.0
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 1.5e-106 390.2 305 69.2
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 1.4e-104 383.6 305 67.2
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 5.2e-104 381.7 300 67.3
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 1.4e-101 373.6 302 66.9
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 1.9e-101 373.2 308 66.9
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 3.9e-99 365.5 301 64.5
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 1.2e-97 360.5 304 66.8
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 2.1e-97 359.8 305 64.3
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 4.7e-97 358.6 305 65.9
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 8.1e-97 357.8 301 63.5
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 2.4e-96 356.3 301 63.5
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 2.6e-95 352.8 310 63.2
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 2.6e-95 352.8 308 62.3
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 4.4e-95 352.1 308 62.3
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 1.3e-94 350.5 311 61.4
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 2.9e-94 349.4 301 62.1
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 2.9e-94 349.4 306 63.1
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 4.9e-94 348.6 310 62.6
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 4.9e-94 348.6 301 64.1
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 6.4e-94 348.2 306 63.4
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 1.1e-93 347.4 300 62.0
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 2.4e-93 346.3 300 62.3
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 3.2e-93 345.9 300 63.3
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 4.2e-93 345.5 307 62.2
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 4.2e-93 345.5 307 62.2
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 4.2e-93 345.5 307 62.2
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 4.2e-93 345.5 298 63.8
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 4.2e-93 345.5 309 62.8
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 4.2e-93 345.5 301 65.1
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 9.2e-93 344.4 306 61.8
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 1.6e-92 343.6 301 63.8
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.6e-92 343.6 307 62.2
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 1.6e-92 343.6 296 62.8
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 2.7e-92 342.8 295 63.4
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 2.7e-92 342.8 301 64.8
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 3.5e-92 342.4 301 64.5
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 1.0e-91 340.9 300 62.3
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 1.3e-91 340.5 295 63.1
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 1.7e-91 340.1 303 60.1
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 2.3e-91 339.7 283 65.4
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 3.0e-91 339.3 304 61.8
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 3.0e-91 339.3 302 60.9
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 3.0e-91 339.3 303 61.4
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 3.9e-91 339.0 307 61.2
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 3.9e-91 339.0 302 61.3
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 1.1e-90 337.4 301 61.8
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 7.3e-90 334.7 304 60.9
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 1.2e-89 334.0 302 60.6
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 1.6e-89 333.6 307 58.6
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 1.6e-89 333.6 307 58.6
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 1.6e-89 333.6 307 60.3
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 1.6e-89 333.6 344 55.5
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 3.6e-89 332.4 301 60.5
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 4.7e-89 332.0 305 59.3
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 6.2e-89 331.6 301 59.1
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 1.8e-88 330.1 302 59.6
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 1.8e-88 330.1 345 54.5
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 1.8e-88 330.1 288 63.9
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 4.0e-88 328.9 287 61.7
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 9.0e-88 327.8 363 51.8
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 2.0e-87 326.6 303 59.4
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 7.6e-87 324.7 297 58.9
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 6.4e-86 321.6 300 56.7
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 5.4e-85 318.5 302 58.6
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 7.1e-85 318.2 301 57.5
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 7.1e-85 318.2 300 60.0
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 1.6e-84 317.0 308 59.1
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 7.8e-84 314.7 304 57.6
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 7.8e-84 314.7 301 57.8
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 5.6e-82 308.5 306 54.2
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 5.6e-82 308.5 287 58.2
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 6.2e-81 305.1 297 55.6
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 1.8e-80 303.5 300 55.3
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 3.1e-80 302.8 295 57.6
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 2.0e-79 300.1 327 51.7
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 3.4e-79 299.3 303 52.8
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 5.8e-79 298.5 302 54.6
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 7.6e-79 298.1 302 53.0
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 1.9e-77 293.5 296 56.1
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 2.4e-77 293.1 298 55.4
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 4.2e-77 292.4 300 52.3
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 7.1e-77 291.6 302 51.7
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 7.1e-77 291.6 300 51.7
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 2.7e-76 289.7 300 51.3
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 2.3e-75 286.6 305 52.8
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 3.0e-75 286.2 308 51.3
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 3.0e-75 286.2 304 55.3
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 3.9e-75 285.8 300 50.7
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 8.7e-75 284.6 303 53.8
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 1.1e-74 284.3 272 55.1
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 2.5e-74 283.1 268 57.8
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 3.3e-74 282.7 303 53.8
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 4.8e-73 278.9 294 53.4
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 1.1e-72 277.7 309 50.2
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 2.4e-72 276.6 306 51.3
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 3.1e-72 276.2 297 52.9
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 2.0e-71 273.5 289 52.6
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 7.6e-71 271.6 250 57.2
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 1.3e-70 270.8 300 48.7
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 1.3e-70 270.8 270 55.9
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 6.4e-70 268.5 300 48.3
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 1.6e-68 263.8 301 49.2
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 3.5e-68 262.7 298 52.0
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 7.9e-68 261.5 302 48.0
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 1.1e-66 257.7 305 48.9
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 3.3e-66 256.1 268 53.7
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 2.8e-65 253.1 268 53.4
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 2.4e-64 250.0 330 44.5
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 1.2e-63 247.7 307 47.6
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 1.4e-61 240.7 299 46.2
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 7.1e-61 238.4 232 59.1
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 6.1e-60 235.3 310 45.2
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 4.3e-58 229.2 258 50.8
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 4.3e-58 229.2 315 44.8
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 2.4e-56 223.4 229 56.3
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 1.2e-55 221.1 222 56.3
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.0e-54 218.0 301 41.5
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 1.4e-53 214.2 296 44.9
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 3.2e-53 213.0 287 42.5
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 7.2e-53 211.8 222 55.0
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 3.0e-51 206.5 277 42.6
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 6.9e-48 195.3 219 49.3
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 1.0e-43 181.4 304 39.8
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 3.9e-43 179.5 217 48.8
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 1.1e-42 177.9 198 53.5
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 2.2e-41 173.7 294 40.1
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 1.0e-35 154.8 239 38.9
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 5.7e-34 149.1 294 33.7
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 4.2e-29 132.9 152 52.6
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 1.2e-28 131.3 376 28.2
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 8.8e-27 125.2 147 50.3
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 5.9e-23 112.5 83 68.7
C06p45240 Brassica napus HOM05D000048 ORTHO05D000207 9.4e-21 105.1 86 59.3
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 4.0e-19 99.8 143 39.9
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 1.8e-16 90.9 302 27.2
AagrBONN_evm.TU.Sc2ySwM_117.2697 Anthoceros agrestis HOM05D005473 ORTHO05D006543 2.0e-10 70.9 145 35.2
CAN.G572.16 Capsicum annuum HOM05D005473 ORTHO05D006543 4.1e-08 63.2 106 32.1
MCO05G366 Micromonas commoda HOM05D005473 ORTHO05D006543 1.2e-07 61.6 158 27.2


User provided reference genes

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