Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023578 Daucus carota HOM05D007313 ORTHO05D005299 8.1e-32 139.8 72 100.0
DCAR_026801 Daucus carota HOM05D007313 ORTHO05D005299 6.3e-16 87.0 80 67.5
Dinv10480 Davidia involucrata HOM05D007313 ORTHO05D005299 5.3e-15 84.0 68 67.6
Rhsim09G0090300 Rhododendron simsii HOM05D007313 ORTHO05D005299 5.0e-13 77.4 71 60.6
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 1.4e-12 75.9 64 65.6
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.4e-12 75.9 64 64.1
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 1.4e-12 75.9 64 64.1
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 2.5e-12 75.1 81 56.8
CSS0007506 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 1.2e-11 72.8 71 57.7
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 1.2e-11 72.8 64 60.9
CSS0045507 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 1.6e-11 72.4 73 57.5
Sopen04g003130 Solanum pennellii HOM05D007313 ORTHO05D005299 6.1e-11 70.5 56 62.5
Solyc04g007990.1 Solanum lycopersicum HOM05D007313 ORTHO05D005299 7.9e-11 70.1 56 62.5
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 1.0e-10 69.7 62 59.7
Migut.E00472 Erythranthe guttata HOM05D007313 ORTHO05D005299 1.0e-10 69.7 68 52.9
PGSC0003DMG400029516 Solanum tuberosum HOM05D007313 ORTHO05D005299 3.9e-10 67.8 56 60.7
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 3.9e-10 67.8 62 61.3
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 6.7e-10 67.0 64 57.8
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 6.7e-10 67.0 64 57.8
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 6.7e-10 67.0 64 57.8
TAR629G3106 Trochodendron aralioides HOM05D007313 ORTHO05D005299 8.8e-10 66.6 71 59.2
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 2.5e-09 65.1 70 50.0
AT1G67920 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 4.3e-09 64.3 57 59.6
Potri.008G134100 Populus trichocarpa HOM05D007313 ORTHO05D005299 5.7e-09 63.9 79 49.4
SalBow2G1257 Salvia bowleyana HOM05D007313 ORTHO05D005299 7.4e-09 63.5 68 50.0
AL2G26720 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 9.7e-09 63.2 57 57.9
Manes.15G133700 Manihot esculenta HOM05D007313 ORTHO05D005299 9.7e-09 63.2 57 59.6
Psat7g008240 Pisum sativum HOM05D007313 ORTHO05D005299 1.3e-08 62.8 68 52.9
CARHR060560 Cardamine hirsuta HOM05D007313 ORTHO05D005299 2.2e-08 62.0 54 61.1
Thhalv10019740m.g Eutrema salsugineum HOM05D007313 ORTHO05D005299 3.7e-08 61.2 55 63.6
Medtr8g105190 Medicago truncatula HOM05D007313 ORTHO05D005299 4.8e-08 60.8 69 52.2
Nn4g24351 Nelumbo nucifera HOM05D008500 ORTHO05D005299 6.3e-08 60.5 72 55.6
Sp5g22920 Schrenkiella parvula HOM05D007313 ORTHO05D005299 6.3e-08 60.5 53 62.3
Carub.0002s1441 Capsella rubella HOM05D007313 ORTHO05D005299 8.2e-08 60.1 57 57.9
Cfa015015 Carpinus fangiana HOM05D007313 ORTHO05D005299 8.2e-08 60.1 61 55.7
TAR371G1237 Trochodendron aralioides HOM05D008500 ORTHO05D005299 1.4e-07 59.3 76 50.0
BraA07t31073Z Brassica rapa HOM05D007313 ORTHO05D005299 1.8e-07 58.9 53 60.4
TAR371G0465 Trochodendron aralioides HOM05D008500 ORTHO05D005299 1.8e-07 58.9 76 50.0
BcaC08g46215 Brassica carinata HOM05D007313 ORTHO05D005299 3.1e-07 58.2 53 60.4
BolC6t39221H Brassica oleracea HOM05D007313 ORTHO05D005299 3.1e-07 58.2 53 60.4
BcaB03g15149 Brassica carinata HOM05D007313 ORTHO05D005299 4.1e-07 57.8 53 60.4
BcaC08g46017 Brassica carinata HOM05D007313 ORTHO05D005299 4.1e-07 57.8 53 60.4
A07p32280 Brassica napus HOM05D007313 ORTHO05D005299 4.1e-07 57.8 53 60.4
C06p38120 Brassica napus HOM05D007313 ORTHO05D005299 4.1e-07 57.8 53 60.4
BolC6t38909H Brassica oleracea HOM05D007313 ORTHO05D005299 4.1e-07 57.8 53 60.4
BraA07t30853Z Brassica rapa HOM05D007313 ORTHO05D005299 4.1e-07 57.8 53 60.4
Lj4g0008951 Lotus japonicus HOM05D007313 ORTHO05D005299 4.1e-07 57.8 74 54.1
Ca_17263_v3 Cicer arietinum L. HOM05D007313 ORTHO05D005299 5.3e-07 57.4 69 53.6
Ca_17284_v3 Cicer arietinum L. HOM05D007313 ORTHO05D005299 5.3e-07 57.4 69 53.6
Glyma.07G104300 Glycine max HOM05D008500 ORTHO05D005299 5.3e-07 57.4 56 60.7
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 5.3e-07 57.4 71 49.3
QL03p035637 Quercus lobata HOM05D007313 ORTHO05D005299 5.3e-07 57.4 72 52.8
BcaB03g15385 Brassica carinata HOM05D007313 ORTHO05D005299 6.9e-07 57.0 68 52.9
A02p14560 Brassica napus HOM05D007313 ORTHO05D005299 6.9e-07 57.0 53 60.4
A07p34460 Brassica napus HOM05D007313 ORTHO05D005299 6.9e-07 57.0 53 58.5
BraA02t06526Z Brassica rapa HOM05D007313 ORTHO05D005299 6.9e-07 57.0 53 60.4
FAN18G0107 Fragaria x ananassa HOM05D008500 ORTHO05D005299 6.9e-07 57.0 64 57.8
TPR.G18382 Trifolium pratense HOM05D008500 ORTHO05D005299 6.9e-07 57.0 72 50.0
ATR0753G095 Amborella trichopoda HOM05D008500 ORTHO05D005299 1.2e-06 56.2 75 53.3
FvH4_5g17640 Fragaria vesca HOM05D008500 ORTHO05D005299 1.2e-06 56.2 73 52.1
Phvul.004G148400 Phaseolus vulgaris HOM05D008500 ORTHO05D005299 1.2e-06 56.2 74 50.0
Prupe.1G332700 Prunus persica HOM05D007313 ORTHO05D005299 1.2e-06 56.2 62 54.8
RcHm_v2.0_Chr7g0178031 Rosa chinensis HOM05D008500 ORTHO05D005299 1.2e-06 56.2 73 52.1
BcaB05g24323 Brassica carinata HOM05D007313 ORTHO05D005299 1.5e-06 55.8 53 58.5
FAN04G2293 Fragaria x ananassa HOM05D008500 ORTHO05D005299 1.5e-06 55.8 73 52.1
FAN08G2086 Fragaria x ananassa HOM05D008500 ORTHO05D005299 1.5e-06 55.8 73 52.1
Glyma.09G173300 Glycine max HOM05D008500 ORTHO05D005299 1.5e-06 55.8 59 61.0
BcaC03g14888 Brassica carinata HOM05D007313 ORTHO05D005299 2.0e-06 55.5 53 58.5
C02p23620 Brassica napus HOM05D007313 ORTHO05D005299 2.0e-06 55.5 53 58.5
BolC2t08492H Brassica oleracea HOM05D007313 ORTHO05D005299 2.0e-06 55.5 53 58.5
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 2.6e-06 55.1 69 47.8
Lalb_Chr14g0370691 Lupinus albus HOM05D008500 ORTHO05D005299 2.6e-06 55.1 59 61.0
Lalb_Chr16g0386911 Lupinus albus HOM05D008500 ORTHO05D005299 3.4e-06 54.7 60 61.7
MBI19_g22070_MAGBIO Magnolia biondii HOM05D008500 ORTHO05D005299 3.4e-06 54.7 75 53.3
ECA233G5799 Erigeron canadensis HOM05D007313 ORTHO05D005299 4.5e-06 54.3 57 61.4
Psat1g030680 Pisum sativum HOM05D008500 ORTHO05D005299 4.5e-06 54.3 72 50.0
Lsat_1_v5_gn_8_46180 Lactuca sativa HOM05D007313 ORTHO05D005299 5.9e-06 53.9 73 52.1
MD16G1019400 Malus domestica HOM05D007313 ORTHO05D005299 5.9e-06 53.9 66 51.5
VMungo0464G1302 Vigna mungo HOM05D008500 ORTHO05D005299 5.9e-06 53.9 70 51.4
Sabra08G0102600 Salix brachista HOM05D007313 ORTHO05D005299 7.7e-06 53.5 77 44.2


User provided reference genes

Program Settings