Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023573 Daucus carota HOM05D001471 ORTHO05D044728 6.7e-31 136.7 70 100.0
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 2.2e-10 68.6 46 67.4
Eucgr.B02677 Eucalyptus grandis HOM05D001471 ORTHO05D001325 2.9e-10 68.2 45 66.7
Eucgr.B02680 Eucalyptus grandis HOM05D001471 ORTHO05D001325 2.9e-10 68.2 45 66.7
Eucgr.L02625 Eucalyptus grandis HOM05D001471 ORTHO05D001325 2.9e-10 68.2 45 66.7
Prupe.1G334300 Prunus persica HOM05D001471 ORTHO05D001325 2.9e-10 68.2 45 71.1
QL03p036155 Quercus lobata HOM05D001471 ORTHO05D001325 2.9e-10 68.2 46 67.4
CSS0008028 Camellia sinensis var. sinensis HOM05D001471 ORTHO05D001325 8.5e-10 66.6 45 66.7
TAR622G1183 Trochodendron aralioides HOM05D001471 ORTHO05D001325 8.5e-10 66.6 47 68.1
Cfa015031 Carpinus fangiana HOM05D001471 ORTHO05D001325 1.5e-09 65.9 46 65.2
Lalb_Chr04g0258721 Lupinus albus HOM05D001471 ORTHO05D001325 2.5e-09 65.1 45 66.7
Manes.17G084700 Manihot esculenta HOM05D001471 ORTHO05D001325 2.5e-09 65.1 45 66.7
Manes.17G084777 Manihot esculenta HOM05D001471 ORTHO05D001325 2.5e-09 65.1 45 66.7
Haze_10866 Corylus avellana HOM05D001471 ORTHO05D001325 3.2e-09 64.7 46 65.2
TPR.G36972 Trifolium pratense HOM05D001471 ORTHO05D001325 3.2e-09 64.7 45 60.0
Ciclev10016393m.g Citrus clementina HOM05D001471 ORTHO05D001325 4.2e-09 64.3 45 64.4
Lsat_1_v5_gn_4_24681 Lactuca sativa HOM05D001471 ORTHO05D001325 4.2e-09 64.3 45 60.0
Manes.15G135300 Manihot esculenta HOM05D001471 ORTHO05D001325 4.2e-09 64.3 46 63.0
RcHm_v2.0_Chr4g0442771 Rosa chinensis HOM05D001471 ORTHO05D001325 5.5e-09 63.9 45 66.7
FAN07G0242 Fragaria x ananassa HOM05D001471 ORTHO05D001325 7.2e-09 63.5 45 66.7
FAN07G1372 Fragaria x ananassa HOM05D001471 ORTHO05D001325 7.2e-09 63.5 45 66.7
Manes.15G135200 Manihot esculenta HOM05D001471 ORTHO05D001325 7.2e-09 63.5 45 62.2
HanXRQChr16g0527331 Helianthus annuus HOM05D001471 ORTHO05D001325 9.4e-09 63.2 45 60.0
Cpa.g.sc2.185 Carica papaya HOM05D001471 ORTHO05D001325 1.2e-08 62.8 46 60.9
Dinv18905 Davidia involucrata HOM05D001471 ORTHO05D001325 1.2e-08 62.8 40 72.5
FvH4_4g33460 Fragaria vesca HOM05D001471 ORTHO05D001325 1.2e-08 62.8 45 66.7
FAN12G3380 Fragaria x ananassa HOM05D001471 ORTHO05D001325 1.2e-08 62.8 45 66.7
FAN17G0340 Fragaria x ananassa HOM05D001471 ORTHO05D001325 1.2e-08 62.8 45 66.7
FAN22G0021 Fragaria x ananassa HOM05D001471 ORTHO05D001325 1.2e-08 62.8 45 66.7
Atru.chr11.907 Acer truncatum HOM05D001471 ORTHO05D001325 1.6e-08 62.4 42 59.5
Actinidia34051 Actinidia chinensis HOM05D001471 ORTHO05D001325 1.6e-08 62.4 41 68.3
Ca_12534_v3 Cicer arietinum L. HOM05D001471 ORTHO05D001325 1.6e-08 62.4 45 62.2
ClCG07G005490 Citrullus lanatus HOM05D001471 ORTHO05D001325 1.6e-08 62.4 46 58.7
MD13G1019700 Malus domestica HOM05D001471 ORTHO05D001325 1.6e-08 62.4 45 64.4
Potri.010G105400 Populus trichocarpa HOM05D001471 ORTHO05D001325 1.6e-08 62.4 46 63.0
Phvul.003G016900 Phaseolus vulgaris HOM05D001471 ORTHO05D001325 2.1e-08 62.0 45 60.0
Psat6g051680 Pisum sativum HOM05D001471 ORTHO05D001325 2.1e-08 62.0 45 60.0
Sabra08G0103600 Salix brachista HOM05D001471 ORTHO05D001325 2.1e-08 62.0 46 65.2
Actinidia38432 Actinidia chinensis HOM05D001471 ORTHO05D001325 2.7e-08 61.6 45 60.0
Dinv26355 Davidia involucrata HOM05D001471 ORTHO05D001325 3.6e-08 61.2 45 62.2
Dinv26385 Davidia involucrata HOM05D001471 ORTHO05D001325 3.6e-08 61.2 45 62.2
Migut.E00491 Erythranthe guttata HOM05D001471 ORTHO05D001325 3.6e-08 61.2 41 65.9
HanXRQChr17g0566411 Helianthus annuus HOM05D001471 ORTHO05D001325 3.6e-08 61.2 45 57.8
Cc11_g07740 Coffea canephora HOM05D001471 ORTHO05D001325 4.7e-08 60.8 41 65.9
Glyma.02G086000 Glycine max HOM05D001471 ORTHO05D001325 4.7e-08 60.8 45 60.0
Potri.008G135600 Populus trichocarpa HOM05D001471 ORTHO05D001325 4.7e-08 60.8 46 63.0
DCAR_002676 Daucus carota HOM05D001471 ORTHO05D001325 6.1e-08 60.5 47 57.4
Oeu058199.2 Olea europaea HOM05D001471 ORTHO05D001325 6.1e-08 60.5 45 55.6
Potri.010G105100 Populus trichocarpa HOM05D001471 ORTHO05D001325 6.1e-08 60.5 46 60.9
ClCG07G005510 Citrullus lanatus HOM05D001471 ORTHO05D001325 8.0e-08 60.1 45 57.8
TWI74G0097 Tripterygium wilfordii HOM05D001471 ORTHO05D001325 8.0e-08 60.1 42 57.1
Lj6A736G85 Lonicera japonica HOM05D001471 ORTHO05D001325 1.0e-07 59.7 46 58.7
MSTRG.13630 Avicennia marina HOM05D001471 ORTHO05D001325 1.4e-07 59.3 41 68.3
Cc11_g07760 Coffea canephora HOM05D001471 ORTHO05D001325 1.4e-07 59.3 41 65.9
SGA_v2.0_scaffold23G10183 Striga asiatica HOM05D001471 ORTHO05D001325 1.4e-07 59.3 46 58.7
Lj2g0009818 Lotus japonicus HOM05D001471 ORTHO05D001325 1.8e-07 58.9 45 60.0
CANSAT78G1894 Cannabis sativa HOM05D001471 ORTHO05D001325 2.3e-07 58.5 45 55.6
COL.COLO4_16610 Corchorus olitorius HOM05D001471 ORTHO05D001325 2.3e-07 58.5 46 52.2
Duzib251G0147 Durio zibethinus HOM05D001471 ORTHO05D001325 2.3e-07 58.5 46 54.3
ECA234G1040 Erigeron canadensis HOM05D001471 ORTHO05D001325 2.3e-07 58.5 47 51.1
Aqoxy3G00149 Aquilegia oxysepala HOM05D001471 ORTHO05D001325 3.0e-07 58.2 45 55.6
CsaV3_5G014400 Cucumis sativus L. HOM05D001471 ORTHO05D001325 4.0e-07 57.8 42 54.8
Oeu024533.1 Olea europaea HOM05D001471 ORTHO05D001325 4.0e-07 57.8 41 61.0
Rhsim04G0170400 Rhododendron simsii HOM05D001471 ORTHO05D001325 4.0e-07 57.8 45 62.2
Rhsim04G0170600 Rhododendron simsii HOM05D001471 ORTHO05D001325 4.0e-07 57.8 45 62.2
SalBow2G2179 Salvia bowleyana HOM05D001471 ORTHO05D001325 4.0e-07 57.8 45 55.6
MD16G1017800 Malus domestica HOM05D001471 ORTHO05D001325 5.2e-07 57.4 45 64.4
Medtr1g032580 Medicago truncatula HOM05D001471 ORTHO05D001325 5.2e-07 57.4 39 56.4
Sed0021426 Sechium edule HOM05D001471 ORTHO05D001325 5.2e-07 57.4 46 47.8
vmacro08571 Vaccinium macrocarpon HOM05D001471 ORTHO05D001325 5.2e-07 57.4 45 57.8
Aqoxy3G00151 Aquilegia oxysepala HOM05D001471 ORTHO05D001325 6.7e-07 57.0 41 68.3
Duzib248G0789 Durio zibethinus HOM05D001471 ORTHO05D001325 6.7e-07 57.0 46 54.3
ECA234G2215 Erigeron canadensis HOM05D001471 ORTHO05D001325 6.7e-07 57.0 45 51.1
VMungo1215G2250 Vigna mungo HOM05D001471 ORTHO05D001325 6.7e-07 57.0 41 61.0
Migut.E00490 Erythranthe guttata HOM05D001471 ORTHO05D001325 8.8e-07 56.6 41 61.0
Gohir.A03G115738 Gossypium hirsutum HOM05D001471 ORTHO05D001325 8.8e-07 56.6 46 56.5
Gohir.A03G115776 Gossypium hirsutum HOM05D001471 ORTHO05D001325 8.8e-07 56.6 46 56.5
Hma1.2p1_0277F.1_g111590 Hydrangea macrophylla HOM05D001471 ORTHO05D001325 8.8e-07 56.6 45 57.8
Thecc.02G294800 Theobroma cacao HOM05D001471 ORTHO05D001325 8.8e-07 56.6 46 54.3
GSVIVG01011647001 Vitis vinifera HOM05D001471 ORTHO05D001325 1.2e-06 56.2 38 65.8
ATR0118G006 Amborella trichopoda HOM05D001471 ORTHO05D001325 1.5e-06 55.8 41 63.4
CAN.G282.121 Capsicum annuum HOM05D001471 ORTHO05D001325 1.5e-06 55.8 41 58.5
MELO3C016667.2 Cucumis melo HOM05D001471 ORTHO05D001325 1.5e-06 55.8 42 57.1
CsaV3_5G014390 Cucumis sativus L. HOM05D001471 ORTHO05D001325 1.5e-06 55.8 45 53.3
MBI19_g36738_MAGBIO Magnolia biondii HOM05D001471 ORTHO05D001325 2.0e-06 55.5 41 63.4
Nn3g18394 Nelumbo nucifera HOM05D001471 ORTHO05D001325 2.0e-06 55.5 41 63.4
Peaxi162Scf00655g00009 Petunia axillaris HOM05D001471 ORTHO05D001325 2.0e-06 55.5 41 58.5
THA.LOC104805086 Tarenaya hassleriana HOM05D001471 ORTHO05D001325 2.0e-06 55.5 43 53.5
CAN.G282.122 Capsicum annuum HOM05D001471 ORTHO05D001325 2.6e-06 55.1 41 58.5
Gohir.D02G139600 Gossypium hirsutum HOM05D001471 ORTHO05D001325 2.6e-06 55.1 46 54.3
Gorai.005G157200 Gossypium raimondii HOM05D001471 ORTHO05D001325 2.6e-06 55.1 46 54.3
COL.COLO4_16613 Corchorus olitorius HOM05D001471 ORTHO05D044728 4.4e-06 54.3 39 53.8
PSO017G5973 Papaver somniferum HOM05D001471 ORTHO05D001325 4.4e-06 54.3 38 57.9
Aa31LG1G280 Aethionema arabicum HOM05D001471 ORTHO05D001325 5.7e-06 53.9 42 59.5
MELO3C016666.2 Cucumis melo HOM05D001471 ORTHO05D001325 5.7e-06 53.9 41 53.7
ECA234G0551 Erigeron canadensis HOM05D001103 ORTHO05D000954 7.5e-06 53.5 45 53.3
ECA234G2449 Erigeron canadensis HOM05D001471 ORTHO05D001325 7.5e-06 53.5 43 48.8
Nitab4.5_0000198g0080 Nicotiana tabacum HOM05D001471 ORTHO05D001325 7.5e-06 53.5 41 56.1
PGSC0003DMG400022783 Solanum tuberosum HOM05D001471 ORTHO05D001325 7.5e-06 53.5 42 54.8
Lsat_1_v5_gn_4_24780 Lactuca sativa HOM05D001471 ORTHO05D001325 9.7e-06 53.1 45 53.3
Solyc01g005257.1 Solanum lycopersicum HOM05D001471 ORTHO05D001325 9.7e-06 53.1 38 57.9


User provided reference genes

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