Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 0.0e+00 1685.6 842 100.0
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 3.5e-275 951.8 565 87.4
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 1.2e-227 793.9 565 70.1
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 2.2e-221 773.1 578 69.0
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 2.9e-221 772.7 568 68.7
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 9.3e-220 767.7 570 69.1
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 1.9e-209 733.4 577 65.0
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 7.4e-209 731.5 575 65.2
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 1.6e-208 730.3 543 67.8
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 1.5e-206 723.8 568 66.2
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 1.0e-205 721.1 567 63.7
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 1.2e-203 714.1 547 66.4
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 4.6e-203 712.2 556 63.8
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 2.0e-201 706.8 569 63.4
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 1.3e-200 704.1 571 63.2
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 2.2e-200 703.4 571 63.2
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 6.3e-200 701.8 568 62.0
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 1.4e-199 700.7 565 61.8
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 2.4e-199 699.9 569 64.1
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 6.9e-199 698.4 557 63.9
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 1.5e-198 697.2 571 60.8
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 1.5e-198 697.2 573 63.7
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 1.1e-196 691.0 572 61.4
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 9.4e-196 688.0 597 60.1
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 1.2e-195 687.6 568 62.7
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 1.6e-195 687.2 544 65.1
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 1.6e-195 687.2 574 59.8
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 1.6e-195 687.2 553 64.7
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 2.1e-195 686.8 549 62.7
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 2.7e-195 686.4 574 59.4
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 3.6e-195 686.0 561 63.5
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 5.1e-194 682.2 579 61.5
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 5.1e-194 682.2 569 61.7
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 6.7e-194 681.8 567 63.3
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 9.7e-193 677.9 554 63.7
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 1.3e-192 677.6 581 59.6
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 1.7e-192 677.2 563 60.0
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 3.7e-192 676.0 542 64.0
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.8e-191 673.7 561 62.4
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 4.5e-190 669.1 558 62.4
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 1.0e-189 667.9 567 62.4
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 2.9e-189 666.4 553 61.5
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 2.9e-189 666.4 554 61.9
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 3.8e-189 666.0 567 60.5
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 3.8e-189 666.0 569 60.5
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 5.0e-189 665.6 553 61.8
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 6.5e-189 665.2 569 59.4
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 1.9e-188 663.7 569 62.6
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 2.5e-188 663.3 561 61.1
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 2.5e-188 663.3 553 61.5
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 3.2e-188 662.9 602 58.5
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 9.4e-188 661.4 552 62.1
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 1.6e-187 660.6 555 63.2
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 1.6e-187 660.6 568 60.9
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 2.1e-187 660.2 552 62.5
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 2.1e-187 660.2 553 60.9
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 4.7e-187 659.1 553 60.4
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 4.7e-187 659.1 547 64.4
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 6.1e-187 658.7 555 63.1
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 1.0e-186 657.9 574 60.8
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 1.8e-186 657.1 547 63.4
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 3.0e-186 656.4 549 61.4
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 4.0e-186 656.0 553 62.6
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 5.2e-186 655.6 566 60.2
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 2.0e-185 653.7 569 60.8
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 2.0e-185 653.7 567 60.0
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 2.6e-185 653.3 555 62.9
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 5.7e-185 652.1 571 59.4
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 5.7e-185 652.1 569 59.9
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 5.7e-185 652.1 547 63.3
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 7.5e-185 651.7 574 60.1
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.3e-184 651.0 552 62.3
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 3.7e-184 649.4 570 60.4
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 4.8e-184 649.0 570 60.4
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 4.8e-184 649.0 563 59.5
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 8.2e-184 648.3 573 59.0
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 8.2e-184 648.3 543 61.5
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 2.4e-183 646.7 496 66.5
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.6e-182 644.0 563 61.3
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 2.0e-182 643.7 550 60.2
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 2.0e-182 643.7 547 62.9
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 2.7e-182 643.3 563 60.4
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 3.5e-182 642.9 563 58.3
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 3.8e-181 639.4 565 58.1
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 1.1e-180 637.9 562 61.0
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 1.2e-179 634.4 544 59.7
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 4.7e-179 632.5 556 58.5
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 2.7e-174 616.7 564 56.7
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 8.5e-173 611.7 547 60.3
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 1.1e-172 611.3 547 59.4
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 4.2e-172 609.4 526 62.4
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 8.0e-171 605.1 577 58.2
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 4.0e-170 602.8 563 58.3
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 2.6e-169 600.1 563 57.7
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 2.4e-167 593.6 617 55.9
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 1.0e-165 588.2 577 52.7
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 5.0e-165 585.9 441 64.6
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 1.6e-163 580.9 551 53.4
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 8.9e-162 575.1 560 54.3
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 8.9e-162 575.1 554 56.0
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 2.9e-160 570.1 546 55.5
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 7.8e-158 562.0 592 50.5
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 1.8e-154 550.8 563 54.4
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 6.4e-152 542.3 568 51.8
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 3.2e-151 540.0 423 64.3
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 6.6e-149 532.3 548 52.7
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 6.2e-147 525.8 555 51.0
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 3.4e-145 520.0 470 58.5
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 8.1e-139 498.8 544 50.4
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 5.8e-137 492.7 560 49.3
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 4.1e-135 486.5 314 76.1
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 2.1e-110 404.4 559 41.9
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 4.3e-108 396.7 513 45.2
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 5.8e-105 386.3 564 40.8
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 5.1e-101 373.2 581 37.2
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.9e-96 357.5 358 52.5
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 1.3e-93 348.6 558 38.9
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 4.1e-90 337.0 381 48.8
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 2.6e-84 317.8 395 47.1
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 2.6e-84 317.8 244 63.5
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 3.2e-71 274.2 233 59.7
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 1.2e-60 239.2 432 33.3
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 2.0e-60 238.4 220 57.7
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 5.4e-58 230.3 358 41.1
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 4.5e-57 227.3 198 57.6
arahy.Tifrunner.gnm1.ann1.3A36EA Arachis hypogaea HOM05D005553 ORTHO05D006866 9.5e-47 193.0 153 61.4
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 7.0e-34 150.2 264 36.7
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 2.7e-33 148.3 203 46.3
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 7.3e-31 140.2 147 44.9
DCAR_031345 Daucus carota HOM05D000940 ORTHO05D176840 1.4e-26 125.9 172 44.8
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 3.5e-25 121.3 229 36.2
A05p41020 Brassica napus HOM05D005553 ORTHO05D006866 6.0e-17 94.0 227 33.5
Cre01.g013400 Chlamydomonas reinhardtii HOM05D005553 ORTHO05D006866 2.8e-14 85.1 396 22.0
TAR365G0595 Trochodendron aralioides HOM05D005553 ORTHO05D006866 4.4e-12 77.8 87 47.1
unitig_0.g371 Utricularia gibba HOM05D005553 ORTHO05D006866 1.3e-11 76.3 50 76.0
VMungo1383G0327 Vigna mungo HOM05D005553 ORTHO05D006866 1.4e-10 72.8 53 64.2
MCO09G019 Micromonas commoda HOM05D005553 ORTHO05D006866 2.7e-09 68.6 143 30.8
TAR629G3474 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.9e-07 62.4 296 24.3


User provided reference genes

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