Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023500 Daucus carota HOM05D007342 ORTHO05D009252 1.9e-173 612.5 318 100.0
DCAR_023285 Daucus carota HOM05D007342 ORTHO05D009252 2.2e-145 519.2 334 83.8
MSTRG.10096 Avicennia marina HOM05D007342 ORTHO05D009252 7.2e-32 142.1 417 31.7
Peaxi162Scf01123g00234 Petunia axillaris HOM05D007342 ORTHO05D009252 7.2e-32 142.1 354 33.3
Dinv29744 Davidia involucrata HOM05D007342 ORTHO05D009252 2.8e-31 140.2 395 32.9
GSVIVG01017735001 Vitis vinifera HOM05D007342 ORTHO05D009252 4.9e-28 129.4 269 34.6
CSS0019788 Camellia sinensis var. sinensis HOM05D007342 ORTHO05D009252 5.4e-27 125.9 347 34.0
Lsat_1_v5_gn_5_56841 Lactuca sativa HOM05D007342 ORTHO05D009252 9.2e-27 125.2 361 31.0
Gohir.D09G239700 Gossypium hirsutum HOM05D007342 ORTHO05D009252 1.2e-26 124.8 377 32.9
Sopen01g030760 Solanum pennellii HOM05D007342 ORTHO05D009252 2.7e-26 123.6 319 33.9
Gorai.006G262500 Gossypium raimondii HOM05D007342 ORTHO05D009252 3.5e-26 123.2 378 32.5
Prupe.1G135700 Prunus persica HOM05D007342 ORTHO05D009252 4.5e-26 122.9 374 33.7
PGSC0003DMG400006281 Solanum tuberosum HOM05D007342 ORTHO05D009252 4.5e-26 122.9 308 31.2
Potri.008G222000 Populus trichocarpa HOM05D007342 ORTHO05D009252 5.9e-26 122.5 374 30.7
ClCG06G005120 Citrullus lanatus HOM05D007342 ORTHO05D009252 1.3e-25 121.3 395 30.1
ECA240G4261 Erigeron canadensis HOM05D007342 ORTHO05D009252 1.3e-25 121.3 402 31.1
Migut.G00157 Erythranthe guttata HOM05D007342 ORTHO05D009252 1.3e-25 121.3 343 30.6
Thecc.04G285100 Theobroma cacao HOM05D007342 ORTHO05D009252 1.3e-25 121.3 350 32.0
FAN12G0202 Fragaria x ananassa HOM05D007342 ORTHO05D009252 1.7e-25 120.9 385 32.7
Nitab4.5_0000059g0470 Nicotiana tabacum HOM05D007342 ORTHO05D009252 2.3e-25 120.6 467 28.9
Cpa.g.sc16.174 Carica papaya HOM05D007342 ORTHO05D009252 5.0e-25 119.4 370 30.8
FvH4_4g18220 Fragaria vesca HOM05D007342 ORTHO05D009252 5.0e-25 119.4 385 32.5
FAN12G3549 Fragaria x ananassa HOM05D007342 ORTHO05D009252 5.0e-25 119.4 385 32.5
MELO3C021329.2 Cucumis melo HOM05D007342 ORTHO05D009252 8.6e-25 118.6 385 30.6
Oeu045723.1 Olea europaea HOM05D007342 ORTHO05D009252 1.1e-24 118.2 252 35.7
COL.COLO4_13866 Corchorus olitorius HOM05D007342 ORTHO05D009252 3.3e-24 116.7 344 31.7
Nitab4.5_0000191g0200 Nicotiana tabacum HOM05D007342 ORTHO05D009252 4.3e-24 116.3 462 29.9
FAN17G1678 Fragaria x ananassa HOM05D007342 ORTHO05D009252 5.6e-24 115.9 388 31.7
Duzib212G0754 Durio zibethinus HOM05D007342 ORTHO05D009252 1.6e-23 114.4 385 29.9
Glyma.07G247200 Glycine max HOM05D007342 ORTHO05D009252 1.6e-23 114.4 360 32.2
QL06p008994 Quercus lobata HOM05D007342 ORTHO05D009252 2.1e-23 114.0 368 31.0
SalBow2G3523 Salvia bowleyana HOM05D007342 ORTHO05D009252 2.8e-23 113.6 366 32.2
Cfa015389 Carpinus fangiana HOM05D007342 ORTHO05D009252 8.0e-23 112.1 360 30.8
TAR633G2120 Trochodendron aralioides HOM05D007342 ORTHO05D009252 8.0e-23 112.1 194 37.1
Actinidia14301 Actinidia chinensis HOM05D007342 ORTHO05D009252 1.0e-22 111.7 226 34.1
Actinidia00019 Actinidia chinensis HOM05D007342 ORTHO05D009252 1.8e-22 110.9 303 29.7
vmacro15234 Vaccinium macrocarpon HOM05D007342 ORTHO05D009252 1.8e-22 110.9 357 30.5
Sabra08G0152900 Salix brachista HOM05D007342 ORTHO05D009252 2.3e-22 110.5 387 30.2
TPR.G3194 Trifolium pratense HOM05D007342 ORTHO05D009252 4.0e-22 109.8 380 29.5
Ciclev10004639m.g Citrus clementina HOM05D007342 ORTHO05D009252 1.2e-21 108.2 373 28.2
TWI53G0473 Tripterygium wilfordii HOM05D007342 ORTHO05D009252 1.5e-21 107.8 286 29.4
Solyc01g080760.4 Solanum lycopersicum HOM05D007342 ORTHO05D009252 2.6e-21 107.1 432 30.1
Haze_01197 Corylus avellana HOM05D007342 ORTHO05D009252 4.4e-21 106.3 330 30.0
PGR031G1889 Punica granatum HOM05D007342 ORTHO05D009252 4.4e-21 106.3 341 30.5
RcHm_v2.0_Chr4g0422351 Rosa chinensis HOM05D007342 ORTHO05D009252 7.5e-21 105.5 390 30.8
AT4G15820 Arabidopsis thaliana HOM05D007342 ORTHO05D009252 4.9e-20 102.8 351 29.1
CANSAT78G2360 Cannabis sativa HOM05D007342 ORTHO05D009252 1.4e-19 101.3 290 30.3
Cc03_g01870 Coffea canephora HOM05D007342 ORTHO05D009252 1.4e-19 101.3 426 29.8
MD13G1168100 Malus domestica HOM05D007342 ORTHO05D009252 1.9e-19 100.9 295 29.8
CiPaw.01G148300 Carya illinoinensis HOM05D007342 ORTHO05D009252 2.4e-19 100.5 276 31.2
MBI18_g13693_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 4.1e-19 99.8 249 31.7
CARHR290340 Cardamine hirsuta HOM05D007342 ORTHO05D009252 5.4e-19 99.4 350 29.1
Nn4g25834 Nelumbo nucifera HOM05D007342 ORTHO05D009252 5.4e-19 99.4 219 32.9
BraA03t14036Z Brassica rapa HOM05D007342 ORTHO05D009252 7.0e-19 99.0 338 26.6
Lalb_Chr12g0196601 Lupinus albus HOM05D007342 ORTHO05D009252 7.0e-19 99.0 133 45.1
ATR0796G152 Amborella trichopoda HOM05D007342 ORTHO05D009252 9.2e-19 98.6 128 44.5
Eucgr.B01323 Eucalyptus grandis HOM05D007342 ORTHO05D009252 9.2e-19 98.6 298 30.5
SGA_v2.0_scaffold67G22631 Striga asiatica HOM05D007342 ORTHO05D009252 1.2e-18 98.2 330 30.6
Medtr4g119920 Medicago truncatula HOM05D007342 ORTHO05D009252 1.6e-18 97.8 389 26.5
Thhalv10025032m.g Eutrema salsugineum HOM05D007342 ORTHO05D009252 2.0e-18 97.4 348 26.1
CDE02G3410 Ceratophyllum demersum HOM05D007342 ORTHO05D009252 2.7e-18 97.1 124 44.4
Aqoxy5G00727 Aquilegia oxysepala HOM05D007342 ORTHO05D009252 6.0e-18 95.9 119 42.0
Glyma.17G026800 Glycine max HOM05D007342 ORTHO05D009252 6.0e-18 95.9 365 29.6
THA.LOC104820266 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 1.0e-17 95.1 347 27.1
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 1.0e-17 95.1 206 33.5
AL7G39470 Arabidopsis lyrata HOM05D007342 ORTHO05D009252 1.3e-17 94.7 353 27.8
Carub.0007s2583 Capsella rubella HOM05D007342 ORTHO05D009252 1.7e-17 94.4 355 29.9
Lj4g0010877 Lotus japonicus HOM05D007342 ORTHO05D009252 2.3e-17 94.0 314 29.9
Psat4g027440 Pisum sativum HOM05D007342 ORTHO05D009252 2.3e-17 94.0 176 34.1
Phvul.003G105800 Phaseolus vulgaris HOM05D007342 ORTHO05D009252 3.0e-17 93.6 122 45.1
Aa31LG10G6280 Aethionema arabicum HOM05D007342 ORTHO05D009252 5.0e-17 92.8 128 39.8
BcaC06g32967 Brassica carinata HOM05D007342 ORTHO05D009252 6.6e-17 92.4 178 33.7
Lalb_Chr07g0177731 Lupinus albus HOM05D007342 ORTHO05D009252 8.6e-17 92.0 166 38.0
Rhsim02G0008900 Rhododendron simsii HOM05D007342 ORTHO05D009252 8.6e-17 92.0 302 30.5
Sp7g14200 Schrenkiella parvula HOM05D007342 ORTHO05D009252 1.1e-16 91.7 341 27.6
THA.LOC104820268 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 1.1e-16 91.7 123 40.7
PSO210G2737 Papaver somniferum HOM05D007342 ORTHO05D009252 1.9e-16 90.9 396 27.8
BcaC06g33445 Brassica carinata HOM05D007342 ORTHO05D009252 2.5e-16 90.5 347 28.2
C07p47420 Brassica napus HOM05D007342 ORTHO05D009252 2.5e-16 90.5 347 28.2
BolC7t45269H Brassica oleracea HOM05D007342 ORTHO05D009252 2.5e-16 90.5 347 28.2
arahy.Tifrunner.gnm1.ann1.4CZB08 Arachis hypogaea HOM05D007342 ORTHO05D009252 4.3e-16 89.7 222 32.9
arahy.Tifrunner.gnm1.ann1.0PW7WM Arachis hypogaea HOM05D007342 ORTHO05D009252 7.3e-16 89.0 222 32.9
Hund19378 Selenicereus undatus HOM05D007342 ORTHO05D009252 4.7e-15 86.3 120 41.7
A03p49350 Brassica napus HOM05D007342 ORTHO05D009252 1.4e-14 84.7 344 25.6
unitig_37.g12398 Utricularia gibba HOM05D007342 ORTHO05D009252 1.4e-14 84.7 303 29.4
PSO832G2203 Papaver somniferum HOM05D007342 ORTHO05D009252 1.8e-14 84.3 350 28.0
SEGI_31295 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 2.3e-14 84.0 112 42.0
HPP92_016942 Vanilla planifolia HOM05D007342 ORTHO05D009252 9.8e-13 78.6 364 25.5
Manes.03G195600 Manihot esculenta HOM05D007342 ORTHO05D009252 2.2e-12 77.4 302 27.8
AUR62028039 Chenopodium quinoa HOM05D007342 ORTHO05D009252 2.9e-12 77.0 203 28.1
AUR62020686 Chenopodium quinoa HOM05D007342 ORTHO05D009252 3.7e-12 76.6 212 27.4
Gohir.A09G238800 Gossypium hirsutum HOM05D007342 ORTHO05D009252 1.1e-11 75.1 309 29.8
Atru.chr4.2846 Acer truncatum HOM05D007342 ORTHO05D009252 2.4e-11 73.9 308 27.3
MBI18_g13694_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 3.2e-11 73.6 271 28.0
THA.LOC104810667 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 4.6e-10 69.7 111 37.8
THA.LOC104820435 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 7.8e-10 68.9 108 38.0
HanXRQChr11g0352981 Helianthus annuus HOM05D005676 ORTHO05D007375 3.0e-09 67.0 169 27.8
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 3.0e-09 67.0 159 28.9
unitig_899.g14797 Utricularia gibba HOM05D005676 ORTHO05D007375 3.9e-09 66.6 172 28.5
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 5.1e-09 66.2 267 25.5
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 5.1e-09 66.2 176 26.7
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 1.1e-08 65.1 159 28.3
SalBow3G4648 Salvia bowleyana HOM05D005676 ORTHO05D007375 1.1e-08 65.1 291 24.4
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 1.1e-08 65.1 118 33.1
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 1.5e-08 64.7 346 27.5
DCAR_005392 Daucus carota HOM05D005676 ORTHO05D007375 1.9e-08 64.3 169 27.2
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 1.9e-08 64.3 169 28.4
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 3.3e-08 63.5 170 26.5
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 3.3e-08 63.5 220 25.5
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 3.3e-08 63.5 275 25.1
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 7.3e-08 62.4 205 23.9
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 7.3e-08 62.4 205 27.8
Cc02_g39430 Coffea canephora HOM05D005676 ORTHO05D007375 9.5e-08 62.0 283 23.7
MBI06_g46583_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 9.5e-08 62.0 118 30.5
Ca_23531_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 1.2e-07 61.6 118 31.4
Sc19g0005330 Simmondsia chinensis HOM05D007342 ORTHO05D009252 1.2e-07 61.6 319 26.0
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 1.6e-07 61.2 169 27.2
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 1.6e-07 61.2 275 24.4
Pp3c12_1870 Physcomitrium patens HOM05D005676 ORTHO05D007375 2.1e-07 60.8 156 30.1
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 2.1e-07 60.8 175 25.7
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 2.8e-07 60.5 118 31.4
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 2.8e-07 60.5 205 24.9
TPR.G16793 Trifolium pratense HOM05D005676 ORTHO05D007375 3.6e-07 60.1 275 23.6
MSTRG.17345 Avicennia marina HOM05D005676 ORTHO05D007375 6.2e-07 59.3 172 26.7
Psat4g161440 Pisum sativum HOM05D005676 ORTHO05D007375 6.2e-07 59.3 242 23.1
AagrBONN_evm.TU.Sc2ySwM_368.2853 Anthoceros agrestis HOM05D005676 ORTHO05D007375 8.1e-07 58.9 119 28.6
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 8.1e-07 58.9 175 24.0
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 8.1e-07 58.9 276 24.6
SEGI_23777 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 8.1e-07 58.9 111 32.4
THA.LOC104817362 Tarenaya hassleriana HOM05D005676 ORTHO05D007375 8.1e-07 58.9 169 26.6
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 1.4e-06 58.2 175 25.7
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 1.4e-06 58.2 277 23.1
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 1.8e-06 57.8 175 25.1
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 1.8e-06 57.8 284 22.5
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 1.8e-06 57.8 159 25.2
Hma1.2p1_0139F.1_g063260 Hydrangea macrophylla HOM05D005676 ORTHO05D007375 2.3e-06 57.4 277 24.2
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 2.3e-06 57.4 220 24.1
ECA246G1832 Erigeron canadensis HOM05D000467 ORTHO05D000379 3.1e-06 57.0 204 25.0
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 3.1e-06 57.0 220 23.6
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.1e-06 57.0 220 23.6
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.1e-06 57.0 220 23.6
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 5.2e-06 56.2 220 23.6
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 5.2e-06 56.2 220 23.6
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 6.8e-06 55.8 174 23.6
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 6.8e-06 55.8 220 23.2
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 6.8e-06 55.8 244 24.6


User provided reference genes

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