Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023359 Daucus carota HOM05D012194 ORTHO05D015569 3.8e-130 468.4 273 100.0
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 1.4e-47 194.1 232 59.5
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 1.9e-33 147.1 230 57.0
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 1.4e-28 131.0 231 51.1
Peaxi162Scf00228g00615 Petunia axillaris HOM05D012194 ORTHO05D015569 2.1e-24 117.1 202 55.4
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 1.1e-17 94.7 192 52.6
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 4.3e-17 92.8 201 50.2
Dinv15141 Davidia involucrata HOM05D007634 ORTHO05D004310 9.6e-17 91.7 178 55.6
Solyc01g058320.4 Solanum lycopersicum HOM05D012194 ORTHO05D015569 3.1e-15 86.7 202 49.0
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 2.0e-14 84.0 229 44.1
PGSC0003DMG400003491 Solanum tuberosum HOM05D012194 ORTHO05D015569 6.5e-13 79.0 201 48.3
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 1.4e-12 77.8 231 45.0
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 2.5e-12 77.0 201 47.8
DCAR_030455 Daucus carota HOM05D009154 ORTHO05D004310 7.1e-12 75.5 119 42.0
TPR.G25427 Trifolium pratense HOM05D007634 ORTHO05D004310 2.1e-11 73.9 203 43.3
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 3.5e-11 73.2 203 45.3
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 6.1e-11 72.4 203 45.3
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 6.1e-11 72.4 203 45.3
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 1.0e-10 71.6 236 31.4
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 5.1e-10 69.3 226 36.3
Nitab4.5_0004165g0050 Nicotiana tabacum HOM05D012194 ORTHO05D015569 6.7e-10 68.9 221 39.8
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 8.7e-10 68.6 212 45.3
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 2.5e-09 67.0 224 40.6
Nitab4.5_0000647g0240 Nicotiana tabacum HOM05D012194 ORTHO05D015569 2.5e-09 67.0 204 42.2
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 4.3e-09 66.2 220 44.5
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 9.7e-09 65.1 225 44.0
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 2.2e-08 63.9 234 40.6
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 4.8e-08 62.8 223 41.7
ECA233G3364 Erigeron canadensis HOM05D009154 ORTHO05D004310 6.3e-08 62.4 202 34.7
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 8.2e-08 62.0 184 46.7
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 1.1e-07 61.6 214 42.5
Peaxi162Scf00164g00910 Petunia axillaris HOM05D012194 ORTHO05D015569 1.1e-07 61.6 193 40.4
Sed0013714 Sechium edule HOM05D009154 ORTHO05D004310 2.4e-07 60.5 201 27.9
HanXRQChr04g0108411 Helianthus annuus HOM05D009154 ORTHO05D004310 3.1e-07 60.1 232 28.4
MSTRG.5144 Avicennia marina HOM05D020384 ORTHO05D004310 4.1e-07 59.7 173 34.1
Cc03_g00620 Coffea canephora HOM05D012194 ORTHO05D004310 4.1e-07 59.7 231 43.7
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 4.1e-07 59.7 228 43.0
Oeu038954.2 Olea europaea HOM05D016587 ORTHO05D004310 5.3e-07 59.3 213 38.5
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 6.9e-07 58.9 205 28.8
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 9.0e-07 58.5 222 41.9
CAN.G305.60 Capsicum annuum HOM05D012194 ORTHO05D015569 1.5e-06 57.8 200 41.5
Solyc05g053360.3 Solanum lycopersicum HOM05D012194 ORTHO05D015569 1.5e-06 57.8 228 37.7
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 5.9e-06 55.8 208 48.6
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 5.9e-06 55.8 230 28.3
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 5.9e-06 55.8 200 30.0
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 1.0e-05 55.1 192 30.7
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 1.0e-05 55.1 218 41.7
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 1.0e-05 55.1 203 33.5
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 1.0e-05 55.1 222 40.5


User provided reference genes

Program Settings