Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 2.2e-97 359.0 182 100.0
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 4.4e-50 201.8 185 59.5
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 4.1e-48 195.3 168 61.9
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 1.2e-47 193.7 169 63.3
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 1.1e-45 187.2 184 60.9
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 1.6e-44 183.3 188 58.5
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 1.6e-44 183.3 159 62.3
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 2.8e-44 182.6 196 56.1
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 2.8e-44 182.6 200 55.5
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 2.8e-44 182.6 194 54.6
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 6.2e-44 181.4 193 53.9
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 1.1e-43 180.6 194 53.6
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 3.1e-43 179.1 203 54.2
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 4.0e-43 178.7 166 59.0
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 2.0e-42 176.4 198 55.6
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 3.4e-42 175.6 160 61.2
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 3.4e-42 175.6 194 55.2
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 3.4e-42 175.6 190 54.2
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 3.4e-42 175.6 191 54.5
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 4.4e-42 175.3 149 60.4
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 5.8e-42 174.9 190 54.2
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 7.5e-42 174.5 180 55.6
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 9.8e-42 174.1 195 53.3
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 1.7e-41 173.3 165 57.6
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 1.7e-41 173.3 164 57.3
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.7e-41 173.3 160 60.6
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 2.9e-41 172.6 147 61.9
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 2.9e-41 172.6 160 58.1
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 8.3e-41 171.0 147 61.2
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 8.3e-41 171.0 179 55.9
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 1.4e-40 170.2 201 50.7
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 1.4e-40 170.2 198 52.0
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 1.4e-40 170.2 135 66.7
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 1.9e-40 169.9 182 55.5
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 2.4e-40 169.5 197 51.3
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 2.4e-40 169.5 180 54.4
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 2.4e-40 169.5 168 59.5
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 3.2e-40 169.1 177 51.4
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 5.4e-40 168.3 145 61.4
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 5.4e-40 168.3 194 51.0
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 9.2e-40 167.5 197 51.8
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 9.2e-40 167.5 194 53.6
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 9.2e-40 167.5 192 52.6
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 1.6e-39 166.8 153 55.6
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 2.1e-39 166.4 201 49.3
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 2.7e-39 166.0 153 59.5
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 3.5e-39 165.6 177 53.7
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 6.0e-39 164.9 166 57.8
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 7.8e-39 164.5 206 50.5
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 1.3e-38 163.7 225 46.7
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 1.9e-37 159.8 186 50.0
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 1.9e-37 159.8 165 54.5
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 2.5e-37 159.5 163 54.6
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 5.6e-37 158.3 184 48.9
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 2.8e-36 156.0 177 51.4
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 4.7e-36 155.2 187 49.7
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.4e-35 153.7 152 57.2
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.8e-35 153.3 146 57.5
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.8e-35 153.3 152 56.6
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 4.0e-35 152.1 152 56.6
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 4.0e-35 152.1 152 56.6
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 4.0e-35 152.1 184 48.4
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 6.8e-35 151.4 163 52.8
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 6.8e-35 151.4 207 43.0
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 6.8e-35 151.4 146 56.8
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.2e-34 150.6 173 52.6
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 1.5e-34 150.2 186 48.9
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 1.5e-34 150.2 93 74.2
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 1.5e-34 150.2 97 72.2
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 2.6e-34 149.4 149 55.0
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 9.9e-34 147.5 149 55.0
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 6.4e-33 144.8 236 41.5
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 8.4e-33 144.4 190 49.5
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 1.1e-32 144.1 96 71.9
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 1.9e-32 143.3 108 63.9
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 1.9e-32 143.3 191 49.2
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 7.1e-32 141.4 96 71.9
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 9.2e-32 141.0 152 53.9
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 9.2e-32 141.0 152 53.9
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 1.2e-31 140.6 96 70.8
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 2.1e-31 139.8 194 50.5
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 2.1e-31 139.8 180 49.4
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 3.5e-31 139.0 96 70.8
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 3.5e-31 139.0 96 70.8
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 4.6e-31 138.7 96 70.8
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 6.0e-31 138.3 96 70.8
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 1.0e-30 137.5 96 68.8
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 1.0e-30 137.5 96 68.8
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 1.0e-30 137.5 96 68.8
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 2.3e-30 136.3 92 72.8
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 2.3e-30 136.3 92 72.8
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 2.3e-30 136.3 92 72.8
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 3.9e-30 135.6 94 67.0
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 8.6e-30 134.4 92 71.7
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 8.6e-30 134.4 92 71.7
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 8.6e-30 134.4 102 65.7
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 8.6e-30 134.4 102 65.7
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 8.6e-30 134.4 102 65.7
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 1.5e-29 133.7 94 67.0
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 4.3e-29 132.1 92 70.7
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 5.6e-29 131.7 94 68.1
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 9.6e-29 131.0 92 69.6
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 2.8e-28 129.4 145 51.0
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 4.7e-28 128.6 94 68.1
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 2.4e-27 126.3 106 56.6
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 1.5e-26 123.6 149 49.0
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 2.9e-25 119.4 176 42.6
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 2.4e-24 116.3 164 47.6
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 3.5e-23 112.5 146 43.8
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 7.8e-23 111.3 155 46.5
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 1.1e-21 107.5 102 52.9
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.1e-20 103.2 120 45.0
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 5.3e-19 98.6 176 39.8
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 6.9e-19 98.2 92 51.1
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 6.9e-19 98.2 92 51.1
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 1.7e-17 93.6 110 45.5
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 2.4e-16 89.7 58 77.6
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 2.4e-16 89.7 58 77.6
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 2.1e-15 86.7 67 73.1
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.6e-12 77.0 42 71.4
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 1.6e-12 77.0 87 44.8
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 2.4e-11 73.2 183 32.2
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 2.4e-11 73.2 183 32.2
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 6.9e-11 71.6 113 37.2
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 7.6e-10 68.2 192 30.7
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 9.3e-08 61.2 201 29.4
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 1.2e-07 60.8 91 35.2
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 7.9e-07 58.2 41 58.5
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 5.1e-06 55.5 104 33.7
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 6.7e-06 55.1 191 28.8
A05p27070 Brassica napus HOM05D005829 ORTHO05D007246 8.7e-06 54.7 46 56.5


User provided reference genes

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