Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023189 Daucus carota HOM05D003541 ORTHO05D004095 1.9e-166 589.3 345 100.0
DCAR_023188 Daucus carota HOM05D003541 ORTHO05D004095 2.4e-166 589.0 344 100.0
CSS0035183 Camellia sinensis var. sinensis HOM05D003541 ORTHO05D004095 1.4e-110 403.7 349 62.8
DCAR_011345 Daucus carota HOM05D003541 ORTHO05D004095 1.2e-109 400.6 346 63.0
Hma1.2p1_0340F.1_g129780 Hydrangea macrophylla HOM05D003541 ORTHO05D004095 6.1e-109 398.3 348 62.6
Dinv40426 Davidia involucrata HOM05D003541 ORTHO05D004095 4.8e-106 388.7 348 61.8
Aqoxy3G03927 Aquilegia oxysepala HOM05D003541 ORTHO05D004095 1.6e-104 383.6 349 60.7
Actinidia35078 Actinidia chinensis HOM05D003541 ORTHO05D004095 2.6e-104 382.9 349 60.2
PGSC0003DMG400004445 Solanum tuberosum HOM05D003541 ORTHO05D004095 7.7e-104 381.3 346 59.2
COL.COLO4_16239 Corchorus olitorius HOM05D003541 ORTHO05D004095 1.3e-103 380.6 346 60.1
PGSC0003DMG400005709 Solanum tuberosum HOM05D003541 ORTHO05D004095 2.2e-103 379.8 351 59.3
Migut.I00385 Erythranthe guttata HOM05D003541 ORTHO05D004095 3.8e-103 379.0 348 59.2
PSO063G0435 Papaver somniferum HOM05D003541 ORTHO05D004095 1.1e-102 377.5 349 58.7
MSTRG.11321 Avicennia marina HOM05D003541 ORTHO05D004095 4.2e-102 375.6 349 59.0
Solyc03g119720.4 Solanum lycopersicum HOM05D003541 ORTHO05D004095 5.5e-102 375.2 351 58.7
RcHm_v2.0_Chr7g0184731 Rosa chinensis HOM05D003541 ORTHO05D004095 9.4e-102 374.4 350 59.1
Sopen12g017870 Solanum pennellii HOM05D003541 ORTHO05D004095 1.6e-101 373.6 346 58.1
Prupe.5G218200 Prunus persica HOM05D003541 ORTHO05D004095 2.1e-101 373.2 349 58.2
Solyc12g038160.2 Solanum lycopersicum HOM05D003541 ORTHO05D004095 6.1e-101 371.7 346 57.8
Hma1.2p1_3191F.1_g333810 Hydrangea macrophylla HOM05D003541 ORTHO05D004095 1.0e-100 370.9 335 60.6
GSVIVG01008249001 Vitis vinifera HOM05D003541 ORTHO05D004095 1.0e-100 370.9 347 59.7
PSO782G5001 Papaver somniferum HOM05D003541 ORTHO05D004095 1.4e-100 370.5 349 57.9
Atru.chr9.784 Acer truncatum HOM05D003541 ORTHO05D004095 5.2e-100 368.6 346 59.0
SGA_v2.0_scaffold19G08810 Striga asiatica HOM05D003541 ORTHO05D004095 6.7e-100 368.2 345 57.1
TAR371G0923 Trochodendron aralioides HOM05D003541 ORTHO05D004095 6.7e-100 368.2 348 64.1
Lsat_1_v5_gn_4_115841 Lactuca sativa HOM05D003541 ORTHO05D004095 1.5e-99 367.1 348 62.6
TPR.G21707 Trifolium pratense HOM05D003541 ORTHO05D004095 1.5e-99 367.1 352 58.8
Medtr8g103850 Medicago truncatula HOM05D003541 ORTHO05D004095 2.0e-99 366.7 352 60.2
HanXRQChr09g0269901 Helianthus annuus HOM05D003541 ORTHO05D004095 3.3e-99 365.9 345 60.0
PGR083G2725 Punica granatum HOM05D003541 ORTHO05D004095 1.3e-98 364.0 345 59.4
Peaxi162Scf00015g00839 Petunia axillaris HOM05D003541 ORTHO05D004095 1.7e-98 363.6 334 59.0
Lj4g0015559 Lotus japonicus HOM05D003541 ORTHO05D004095 2.2e-98 363.2 349 59.6
Oeu024322.1 Olea europaea HOM05D003541 ORTHO05D004095 2.8e-98 362.8 333 60.4
Nn3g17767 Nelumbo nucifera HOM05D003541 ORTHO05D004095 8.2e-98 361.3 346 59.0
CAN.G438.122 Capsicum annuum HOM05D003541 ORTHO05D004095 2.4e-97 359.8 350 56.9
MD06G1212200 Malus domestica HOM05D003541 ORTHO05D004095 4.1e-97 359.0 347 63.4
FAN13G2824 Fragaria x ananassa HOM05D003541 ORTHO05D004095 1.6e-96 357.1 350 58.3
HPP92_024716 Vanilla planifolia HOM05D003541 ORTHO05D004095 2.0e-96 356.7 351 57.5
Thecc.03G029700 Theobroma cacao HOM05D003541 ORTHO05D004095 2.7e-96 356.3 348 57.2
FAN08G0854 Fragaria x ananassa HOM05D003541 ORTHO05D004095 3.5e-96 355.9 350 58.0
Eucgr.K02663 Eucalyptus grandis HOM05D003541 ORTHO05D004095 5.9e-96 355.1 348 56.6
FAN18G0309 Fragaria x ananassa HOM05D003541 ORTHO05D004095 5.9e-96 355.1 348 57.5
HanXRQChr05g0152881 Helianthus annuus HOM05D003541 ORTHO05D004095 7.7e-96 354.8 344 55.8
MBI09_g04371_MAGBIO Magnolia biondii HOM05D003541 ORTHO05D004095 7.7e-96 354.8 349 55.9
MD14G1222700 Malus domestica HOM05D003541 ORTHO05D004095 7.7e-96 354.8 349 63.0
Cc04_g07430 Coffea canephora HOM05D003541 ORTHO05D004095 1.0e-95 354.4 346 56.6
Eucgr.B00703 Eucalyptus grandis HOM05D003541 ORTHO05D004095 1.7e-95 353.6 348 56.6
Dinv07364 Davidia involucrata HOM05D003541 ORTHO05D004095 2.2e-95 353.2 348 59.5
Nitab4.5_0001599g0130 Nicotiana tabacum HOM05D003541 ORTHO05D004095 2.9e-95 352.8 327 58.7
Psat7g012440 Pisum sativum HOM05D003541 ORTHO05D004095 2.9e-95 352.8 356 60.4
Sc04g0003690 Simmondsia chinensis HOM05D003541 ORTHO05D004095 5.0e-95 352.1 346 57.8
Gohir.A11G006900 Gossypium hirsutum HOM05D003541 ORTHO05D004095 6.5e-95 351.7 354 56.5
Nitab4.5_0000410g0010 Nicotiana tabacum HOM05D003541 ORTHO05D004095 6.5e-95 351.7 327 61.2
Potri.012G060600 Populus trichocarpa HOM05D003541 ORTHO05D004095 6.5e-95 351.7 354 55.9
ECA246G2878 Erigeron canadensis HOM05D003541 ORTHO05D004095 8.5e-95 351.3 345 54.8
FAN18G3376 Fragaria x ananassa HOM05D003541 ORTHO05D004095 8.5e-95 351.3 350 57.1
Gorai.007G007200 Gossypium raimondii HOM05D003541 ORTHO05D004095 1.5e-94 350.5 348 56.0
ClCG04G011250 Citrullus lanatus HOM05D003541 ORTHO05D004095 1.9e-94 350.1 348 57.2
vmacro16455 Vaccinium macrocarpon HOM05D003541 ORTHO05D004095 2.5e-94 349.7 383 60.3
vmacro22487 Vaccinium macrocarpon HOM05D003541 ORTHO05D004095 2.5e-94 349.7 383 60.3
CANSAT80G0782 Cannabis sativa HOM05D003541 ORTHO05D004095 4.2e-94 349.0 348 60.6
CiPaw.16G084500 Carya illinoinensis HOM05D003541 ORTHO05D004095 4.2e-94 349.0 349 58.2
C06p33740 Brassica napus HOM05D003541 ORTHO05D004095 5.5e-94 348.6 352 57.4
Gohir.D11G006000 Gossypium hirsutum HOM05D003541 ORTHO05D004095 5.5e-94 348.6 354 56.2
BolC6t38489H Brassica oleracea HOM05D003541 ORTHO05D004095 7.2e-94 348.2 352 57.7
Ciclev10019107m.g Citrus clementina HOM05D003541 ORTHO05D004095 7.2e-94 348.2 347 56.8
CsaV3_1G006500 Cucumis sativus L. HOM05D003541 ORTHO05D004095 7.2e-94 348.2 348 57.5
BcaC08g45614 Brassica carinata HOM05D003541 ORTHO05D004095 1.6e-93 347.1 348 57.5
THA.LOC104812131 Tarenaya hassleriana HOM05D003541 ORTHO05D004095 1.6e-93 347.1 350 56.3
TWI81G0124 Tripterygium wilfordii HOM05D003541 ORTHO05D004095 2.7e-93 346.3 354 55.6
Peaxi162Scf00804g00007 Petunia axillaris HOM05D003541 ORTHO05D004095 4.7e-93 345.5 336 56.5
FAN04G2140 Fragaria x ananassa HOM05D003541 ORTHO05D004095 6.1e-93 345.1 349 56.7
Glyma.07G089400 Glycine max HOM05D003541 ORTHO05D004095 8.0e-93 344.7 349 57.0
QL10p023576 Quercus lobata HOM05D003541 ORTHO05D004095 1.0e-92 344.4 354 56.8
SGA_v2.0_scaffold25G10984 Striga asiatica HOM05D003541 ORTHO05D004095 1.0e-92 344.4 344 55.5
Thhalv10018209m.g Eutrema salsugineum HOM05D003541 ORTHO05D004095 1.4e-92 344.0 351 57.5
BolC6t39839H Brassica oleracea HOM05D003541 ORTHO05D004095 2.3e-92 343.2 351 56.1
BraA07t30599Z Brassica rapa HOM05D003541 ORTHO05D004095 2.3e-92 343.2 351 56.1
Lj2g0005362 Lotus japonicus HOM05D003541 ORTHO05D004095 2.3e-92 343.2 348 56.6
Sabra12G0043600 Salix brachista HOM05D003541 ORTHO05D004095 5.2e-92 342.0 363 54.0
Carub.0002s2069 Capsella rubella HOM05D003541 ORTHO05D004095 6.8e-92 341.7 358 56.7
Glyma.09G187400 Glycine max HOM05D003541 ORTHO05D004095 6.8e-92 341.7 348 55.7
A07p39770 Brassica napus HOM05D003541 ORTHO05D004095 2.6e-91 339.7 351 55.3
arahy.Tifrunner.gnm1.ann1.Q237M7 Arachis hypogaea HOM05D003541 ORTHO05D004095 3.4e-91 339.3 346 61.0
A07p29580 Brassica napus HOM05D003541 ORTHO05D004095 3.4e-91 339.3 351 55.8
Lsat_1_v5_gn_5_25181 Lactuca sativa HOM05D003541 ORTHO05D004095 3.4e-91 339.3 343 54.2
BcaB03g15736 Brassica carinata HOM05D003541 ORTHO05D004095 4.4e-91 339.0 353 55.5
BraA07t31524Z Brassica rapa HOM05D003541 ORTHO05D004095 4.4e-91 339.0 351 55.0
AL2G33750 Arabidopsis lyrata HOM05D003541 ORTHO05D004095 9.8e-91 337.8 355 63.7
C06p48040 Brassica napus HOM05D003541 ORTHO05D004095 9.8e-91 337.8 351 55.3
Sp5g29120 Schrenkiella parvula HOM05D003541 ORTHO05D004095 9.8e-91 337.8 350 60.6
arahy.Tifrunner.gnm1.ann1.SXG9J3 Arachis hypogaea HOM05D003541 ORTHO05D004095 1.7e-90 337.0 352 55.1
Rhsim12G0144300 Rhododendron simsii HOM05D003541 ORTHO05D004095 1.7e-90 337.0 422 48.8
VMungo0464G0349 Vigna mungo HOM05D003541 ORTHO05D004095 3.7e-90 335.9 354 54.5
Ah.11g047040 Amaranthus hybridus HOM05D003541 ORTHO05D004095 4.8e-90 335.5 344 55.5
arahy.Tifrunner.gnm1.ann1.5B91PZ Arachis hypogaea HOM05D003541 ORTHO05D004095 4.8e-90 335.5 352 54.8
TWI15G0244 Tripterygium wilfordii HOM05D003541 ORTHO05D004095 4.8e-90 335.5 337 55.5
Lalb_Chr14g0371311 Lupinus albus HOM05D003541 ORTHO05D004095 6.3e-90 335.1 346 61.3
EL10Ac5g11259 Beta vulgaris HOM05D003541 ORTHO05D004095 8.3e-90 334.7 344 55.5
Cpa.g.sc13.27 Carica papaya HOM05D003541 ORTHO05D004095 8.3e-90 334.7 329 65.3
AT1G73920 Arabidopsis thaliana HOM05D003541 ORTHO05D004095 1.1e-89 334.3 354 62.4
Manes.01G020100 Manihot esculenta HOM05D003541 ORTHO05D004095 1.1e-89 334.3 354 55.6
Sed0001727 Sechium edule HOM05D003541 ORTHO05D004095 4.1e-89 332.4 344 56.1
Hund10017 Selenicereus undatus HOM05D003541 ORTHO05D004095 4.1e-89 332.4 363 56.7
Gohir.D11G005900 Gossypium hirsutum HOM05D003541 ORTHO05D004095 7.0e-89 331.6 348 52.6
VMungo0251G0053 Vigna mungo HOM05D003541 ORTHO05D004095 7.0e-89 331.6 354 57.9
HanXRQChr16g0501751 Helianthus annuus HOM05D003541 ORTHO05D004095 1.2e-88 330.9 351 61.8
Phvul.004G160400 Phaseolus vulgaris HOM05D003541 ORTHO05D004095 1.2e-88 330.9 348 54.0
Aa31LG7G3130 Aethionema arabicum HOM05D003541 ORTHO05D004095 2.0e-88 330.1 350 56.3
Gorai.007G007100 Gossypium raimondii HOM05D003541 ORTHO05D004095 2.0e-88 330.1 348 52.6
Medtr6g085070 Medicago truncatula HOM05D003541 ORTHO05D004095 4.5e-88 328.9 349 57.6
Gohir.A11G006800 Gossypium hirsutum HOM05D003541 ORTHO05D004095 5.9e-88 328.6 348 52.3
Sed0000678 Sechium edule HOM05D003541 ORTHO05D004095 5.9e-88 328.6 351 55.0
DCAR_011547 Daucus carota HOM05D003541 ORTHO05D004095 1.7e-87 327.0 293 61.8
CDE04G1171 Ceratophyllum demersum HOM05D003541 ORTHO05D004095 2.2e-87 326.6 349 53.0
AL1G30890 Arabidopsis lyrata HOM05D003541 ORTHO05D004095 2.9e-87 326.2 353 55.5
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 5.0e-87 325.5 344 54.7
Phvul.002G315000 Phaseolus vulgaris HOM05D003541 ORTHO05D004095 8.5e-87 324.7 354 61.3
Sp1g16400 Schrenkiella parvula HOM05D003541 ORTHO05D004095 1.1e-86 324.3 353 55.8
Thhalv10006963m.g Eutrema salsugineum HOM05D003541 ORTHO05D004095 1.5e-86 323.9 353 55.8
AT1G18460 Arabidopsis thaliana HOM05D003541 ORTHO05D004095 2.5e-86 323.2 354 54.8
Carub.0001s1809 Capsella rubella HOM05D003541 ORTHO05D004095 5.5e-86 322.0 353 55.2
Glyma.08G040100 Glycine max HOM05D003541 ORTHO05D004095 5.5e-86 322.0 349 59.6
BcaNung05446 Brassica carinata HOM05D003541 ORTHO05D004095 7.2e-86 321.6 344 55.5
C08p18630 Brassica napus HOM05D003541 ORTHO05D004095 9.5e-86 321.2 344 55.2
BolC8t49489H Brassica oleracea HOM05D003541 ORTHO05D004095 9.5e-86 321.2 344 55.2
Lalb_Chr22g0352971 Lupinus albus HOM05D003541 ORTHO05D004095 9.5e-86 321.2 346 55.5
ATR0681G201 Amborella trichopoda HOM05D003541 ORTHO05D004095 1.2e-85 320.9 336 52.7
Psat1g039360 Pisum sativum HOM05D003541 ORTHO05D004095 2.1e-85 320.1 348 52.9
CARHR067030 Cardamine hirsuta HOM05D003541 ORTHO05D004095 4.7e-85 318.9 336 54.8
PGR044G0196 Punica granatum HOM05D003541 ORTHO05D004095 1.4e-84 317.4 351 53.8
A08p30400 Brassica napus HOM05D003541 ORTHO05D004095 1.8e-84 317.0 345 55.4
Zm00001eb132660 Zea mays HOM05D003541 ORTHO05D004095 1.8e-84 317.0 347 51.0
Nitab4.5_0002043g0080 Nicotiana tabacum HOM05D003541 ORTHO05D004095 2.3e-84 316.6 332 52.4
C08p43390 Brassica napus HOM05D003541 ORTHO05D004095 8.8e-84 314.7 348 54.0
BcaB03g12979 Brassica carinata HOM05D003541 ORTHO05D004095 1.2e-83 314.3 350 54.9
AUR62032198 Chenopodium quinoa HOM05D003541 ORTHO05D004095 2.0e-83 313.5 344 54.4
Hund02522 Selenicereus undatus HOM05D003541 ORTHO05D004095 4.4e-83 312.4 349 50.7
BolC8t51888H Brassica oleracea HOM05D003541 ORTHO05D004095 7.5e-83 311.6 348 53.4
Actinidia18941 Actinidia chinensis HOM05D003541 ORTHO05D004095 4.9e-82 308.9 307 62.2
A09p59950 Brassica napus HOM05D003541 ORTHO05D004095 6.3e-82 308.5 347 52.4
BcaC07g41329 Brassica carinata HOM05D003541 ORTHO05D004095 8.3e-82 308.1 351 53.0
AUR62036965 Chenopodium quinoa HOM05D003541 ORTHO05D004095 2.4e-81 306.6 344 53.8
CARHR019070 Cardamine hirsuta HOM05D003541 ORTHO05D004095 5.4e-81 305.4 347 53.0
BraA09t41366Z Brassica rapa HOM05D003541 ORTHO05D004095 9.2e-81 304.7 346 52.0
Ca_17344_v3 Cicer arietinum L. HOM05D003541 ORTHO05D004095 7.8e-80 301.6 351 52.4
unitig_699.g19434 Utricularia gibba HOM05D003541 ORTHO05D004095 1.5e-78 297.4 349 51.0
ECA232G0305 Erigeron canadensis HOM05D003541 ORTHO05D004095 5.2e-76 288.9 303 62.7
Sc10g0009510 Simmondsia chinensis HOM05D004837 ORTHO05D005741 1.3e-74 284.3 337 51.0
MBI16_g06256_MAGBIO Magnolia biondii HOM05D003541 ORTHO05D004095 3.7e-74 282.7 351 53.8
TPR.G31445 Trifolium pratense HOM05D003541 ORTHO05D004095 6.4e-74 282.0 340 48.8
SEGI_10894 Sequoiadendron giganteum HOM05D003541 ORTHO05D004095 1.4e-73 280.8 355 46.8
Lj5C146G11 Lonicera japonica HOM05D003541 ORTHO05D004095 1.8e-73 280.4 281 59.8
Sopen03g038560 Solanum pennellii HOM05D003541 ORTHO05D004095 1.5e-67 260.8 282 53.2
SHI30433 Sapria himalayana HOM05D003541 ORTHO05D004095 3.7e-66 256.1 335 48.1
Nitab4.5_0000208g0180 Nicotiana tabacum HOM05D003541 ORTHO05D004095 6.4e-66 255.4 313 47.3
Mapoly0004s0087 Marchantia polymorpha HOM05D003541 ORTHO05D004095 2.4e-65 253.4 359 46.5
Pp3c8_18170 Physcomitrium patens HOM05D003541 ORTHO05D004095 1.2e-64 251.1 353 45.0
AagrBONN_evm.TU.Sc2ySwM_362.2698 Anthoceros agrestis HOM05D003541 ORTHO05D004095 4.6e-64 249.2 350 45.7
SalBow5G5009 Salvia bowleyana HOM05D003541 ORTHO05D004095 1.6e-61 240.7 284 49.3
Duzib068G0226 Durio zibethinus HOM05D003541 ORTHO05D004095 8.1e-61 238.4 276 52.9
Lalb_Chr05g0222641 Lupinus albus HOM05D003541 ORTHO05D004095 3.4e-59 233.0 280 54.3
Haze_18628 Corylus avellana HOM05D003541 ORTHO05D004095 7.5e-59 231.9 336 44.3
MELO3C002077.2 Cucumis melo HOM05D003541 ORTHO05D004095 7.5e-59 231.9 279 51.3
SMO164G0035 Selaginella moellendorffii HOM05D003541 ORTHO05D004095 2.2e-58 230.3 334 42.2
Aa31LG4G4210 Aethionema arabicum HOM05D003541 ORTHO05D004095 3.5e-56 223.0 281 51.2
Glyma.05G232700 Glycine max HOM05D003541 ORTHO05D004095 3.9e-55 219.5 283 54.4
Manes.05G138900 Manihot esculenta HOM05D003541 ORTHO05D004095 1.1e-54 218.0 276 49.3
Pp3c20_9110 Physcomitrium patens HOM05D003541 ORTHO05D004095 1.4e-52 211.1 351 45.0
Pp3c18_6270 Physcomitrium patens HOM05D003541 ORTHO05D004095 5.2e-52 209.1 358 44.4
Pp3c19_13160 Physcomitrium patens HOM05D003541 ORTHO05D004095 7.6e-51 205.3 346 40.5
Nn4g23755 Nelumbo nucifera HOM05D003541 ORTHO05D004095 2.2e-50 203.8 186 59.1
FvH4_5g12600 Fragaria vesca HOM05D003541 ORTHO05D004095 5.4e-49 199.1 207 54.6
BraA08t34973Z Brassica rapa HOM05D003541 ORTHO05D004095 2.4e-44 183.7 151 66.2
A07p39760 Brassica napus HOM05D003541 ORTHO05D004095 3.8e-42 176.4 213 50.7
CBR_g165 Chara braunii HOM05D003541 ORTHO05D004095 1.5e-35 154.5 362 34.8
Os01g0521400 Oryza sativa ssp. japonica HOM05D003541 ORTHO05D004095 2.1e-21 107.5 61 80.3
TPR.G31443 Trifolium pratense HOM05D003541 ORTHO05D004095 9.3e-17 92.0 153 42.5
Cre12.g541352 Chlamydomonas reinhardtii HOM05D003541 ORTHO05D004095 2.3e-07 60.8 47 59.6
Duzib138G0063 Durio zibethinus HOM05D002057 ORTHO05D002231 9.7e-06 55.5 43 58.1


User provided reference genes

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