Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023163 Daucus carota HOM05D000874 ORTHO05D001267 0.0e+00 2472.6 1331 100.0
Dinv17430 Davidia involucrata HOM05D000874 ORTHO05D001267 3.5e-104 384.4 1661 29.7
QL10p019931 Quercus lobata HOM05D000874 ORTHO05D001267 1.2e-83 316.2 1143 32.7
CSS0039968 Camellia sinensis var. sinensis HOM05D000874 ORTHO05D001267 6.4e-82 310.5 1095 33.0
GSVIVG01008114001 Vitis vinifera HOM05D000874 ORTHO05D001267 7.1e-81 307.0 1070 33.2
CSS0023333 Camellia sinensis var. sinensis HOM05D000874 ORTHO05D001267 2.6e-75 288.5 1046 32.5
Lj5A134T72 Lonicera japonica HOM05D000874 ORTHO05D001267 1.9e-73 282.3 949 33.8
Actinidia35043 Actinidia chinensis HOM05D000874 ORTHO05D001267 4.5e-67 261.2 1660 27.6
Hma1.2p1_0060F.1_g032960 Hydrangea macrophylla HOM05D000874 ORTHO05D001267 5.8e-67 260.8 1091 31.8
Prupe.5G206700 Prunus persica HOM05D000874 ORTHO05D001267 1.9e-65 255.8 1226 27.7
Haze_07744 Corylus avellana HOM05D000874 ORTHO05D001267 1.1e-60 240.0 1066 30.9
Thecc.03G104300 Theobroma cacao HOM05D000874 ORTHO05D001267 4.1e-60 238.0 1186 29.7
Manes.06G083000 Manihot esculenta HOM05D000874 ORTHO05D001267 8.5e-58 230.3 1172 30.0
CiPaw.11G055300 Carya illinoinensis HOM05D000874 ORTHO05D001267 2.1e-56 225.7 1003 31.7
TAR371G0581 Trochodendron aralioides HOM05D000874 ORTHO05D003941 1.1e-54 219.9 1265 26.9
Duzib068G0415 Durio zibethinus HOM05D000874 ORTHO05D003941 1.5e-54 219.5 1177 28.8
PGSC0003DMG401004066 Solanum tuberosum HOM05D000874 ORTHO05D001267 1.5e-54 219.5 1411 28.8
Actinidia04813 Actinidia chinensis HOM05D000874 ORTHO05D001267 5.7e-54 217.6 1460 27.9
Nitab4.5_0001328g0070 Nicotiana tabacum HOM05D000874 ORTHO05D001267 9.7e-54 216.9 1135 29.6
Oeu017180.1 Olea europaea HOM05D000874 ORTHO05D001267 4.8e-53 214.5 1451 27.6
EL10Ac5g11157 Beta vulgaris HOM05D000874 ORTHO05D001267 3.1e-52 211.8 1112 29.6
CAN.G587.51 Capsicum annuum HOM05D000874 ORTHO05D000105 3.1e-52 211.8 1421 27.0
Peaxi162Scf00013g00075 Petunia axillaris HOM05D000874 ORTHO05D001267 5.3e-52 211.1 1459 27.9
Rhsim08G0144400 Rhododendron simsii HOM05D000874 ORTHO05D001267 6.9e-52 210.7 1547 26.6
Ciclev10018493m.g Citrus clementina HOM05D000874 ORTHO05D001267 2.9e-50 205.3 1165 28.1
FAN08G0155 Fragaria x ananassa HOM05D000874 ORTHO05D001267 1.4e-49 203.0 1174 28.4
FvH4_5g13670 Fragaria vesca HOM05D000874 ORTHO05D001267 2.5e-49 202.2 1170 27.7
ClCG06G015550 Citrullus lanatus HOM05D000874 ORTHO05D001267 3.2e-49 201.8 1206 27.3
Solyc06g069440.3 Solanum lycopersicum HOM05D000874 ORTHO05D001267 4.7e-48 198.0 1418 26.5
Manes.14G086800 Manihot esculenta HOM05D000874 ORTHO05D001267 6.1e-48 197.6 1180 28.7
FAN18G0264 Fragaria x ananassa HOM05D000874 ORTHO05D001267 1.4e-47 196.4 1164 28.1
RcHm_v2.0_Chr7g0183291 Rosa chinensis HOM05D000874 ORTHO05D001267 8.8e-47 193.7 1476 27.9
AUR62039650 Chenopodium quinoa HOM05D000874 ORTHO05D001267 2.2e-45 189.1 1081 29.4
Glyma.06G204600 Glycine max HOM05D000874 ORTHO05D001267 2.2e-45 189.1 1079 28.4
Nitab4.5_0007645g0020 Nicotiana tabacum HOM05D000874 ORTHO05D001267 3.7e-45 188.3 729 28.5
MD14G1213100 Malus domestica HOM05D000874 ORTHO05D001267 8.2e-45 187.2 762 30.4
Sopen06g026730 Solanum pennellii HOM05D000874 ORTHO05D001267 1.1e-44 186.8 1418 27.9
TWI60G1583 Tripterygium wilfordii HOM05D000874 ORTHO05D001267 1.1e-44 186.8 1169 28.1
Glyma.04G160800 Glycine max HOM05D000874 ORTHO05D001267 1.2e-43 183.3 1065 28.2
Gohir.A03G070700 Gossypium hirsutum HOM05D000874 ORTHO05D001267 7.7e-43 180.6 1241 26.8
Nn4g23458 Nelumbo nucifera HOM05D000874 ORTHO05D001267 1.7e-42 179.5 1304 26.9
VMungo1309G3138 Vigna mungo HOM05D000874 ORTHO05D001267 2.9e-42 178.7 1084 26.0
Ca_02921_v3 Cicer arietinum L. HOM05D000874 ORTHO05D001267 8.5e-42 177.2 750 29.2
Psat4g051080 Pisum sativum HOM05D000874 ORTHO05D001267 9.4e-41 173.7 1082 28.1
MSTRG.22953 Avicennia marina HOM05D000874 ORTHO05D001267 2.1e-40 172.6 1424 26.6
Cc00_g03520 Coffea canephora HOM05D000874 ORTHO05D001267 3.6e-40 171.8 1130 26.9
CsaV3_1G003050 Cucumis sativus L. HOM05D000874 ORTHO05D001267 3.6e-40 171.8 1071 27.3
COL.COLO4_24322 Corchorus olitorius HOM05D000874 ORTHO05D001267 1.0e-39 170.2 1312 27.1
FAN13G1125 Fragaria x ananassa HOM05D000874 ORTHO05D001049 1.4e-39 169.9 1464 27.0
Phvul.009G202700 Phaseolus vulgaris HOM05D000874 ORTHO05D001267 2.3e-39 169.1 1069 27.2
Gorai.003G101900 Gossypium raimondii HOM05D000874 ORTHO05D001267 4.0e-39 168.3 1223 28.4
vmacro16489 Vaccinium macrocarpon HOM05D000874 ORTHO05D001267 4.0e-39 168.3 828 32.2
CSS0036101 Camellia sinensis var. sinensis HOM05D000874 ORTHO05D001267 2.0e-38 166.0 209 48.8
Medtr2g060650 Medicago truncatula HOM05D000874 ORTHO05D001267 8.2e-37 160.6 1377 27.5
AUR62021535 Chenopodium quinoa HOM05D000874 ORTHO05D001267 2.4e-36 159.1 1101 26.6
Sed0005310 Sechium edule HOM05D000874 ORTHO05D001267 4.1e-36 158.3 1271 26.5
Atru.chr9.526 Acer truncatum HOM05D000874 ORTHO05D001267 7.0e-36 157.5 286 39.5
Actinidia16140 Actinidia chinensis HOM05D000874 ORTHO05D001267 1.3e-34 153.3 523 31.9
Eucgr.B00614 Eucalyptus grandis HOM05D000874 ORTHO05D001267 3.2e-33 148.7 1175 26.6
arahy.Tifrunner.gnm1.ann1.GR9NQC Arachis hypogaea HOM05D000874 ORTHO05D001267 6.1e-32 144.4 1135 28.4
Lalb_Chr05g0229601 Lupinus albus HOM05D000874 ORTHO05D001267 6.1e-32 144.4 870 28.9
Gohir.D03G097100 Gossypium hirsutum HOM05D000874 ORTHO05D001267 1.2e-30 140.2 1066 29.0
arahy.Tifrunner.gnm1.ann1.A58RJ7 Arachis hypogaea HOM05D000874 ORTHO05D001267 2.6e-30 139.0 1160 28.6
MELO3C017234.2 Cucumis melo HOM05D000874 ORTHO05D001267 9.1e-28 130.6 271 36.9
CANSAT80G1925 Cannabis sativa HOM05D000874 ORTHO05D001267 4.2e-25 121.7 1189 26.5
SalBow5G5238 Salvia bowleyana HOM05D000874 ORTHO05D001267 5.5e-25 121.3 1455 25.5
Atru.chr9.525 Acer truncatum HOM05D000874 ORTHO05D001267 2.1e-24 119.4 652 30.4
Lj1g0025338 Lotus japonicus HOM05D000874 ORTHO05D001267 3.6e-24 118.6 1024 26.9
Sc12g0007060 Simmondsia chinensis HOM05D000874 ORTHO05D001267 3.6e-24 118.6 1127 26.4
Duzib205G0866 Durio zibethinus HOM05D000874 ORTHO05D001267 4.0e-23 115.2 165 47.3
Aqoxy3G03671 Aquilegia oxysepala HOM05D000874 ORTHO05D001267 1.5e-22 113.2 1148 25.6
Cpa.g.sc94.72 Carica papaya HOM05D000874 ORTHO05D001267 9.8e-22 110.5 217 40.1
Lalb_Chr16g0391661 Lupinus albus HOM05D000874 ORTHO05D001267 1.3e-21 110.2 216 37.0
Potri.006G227200 Populus trichocarpa HOM05D000874 ORTHO05D001267 6.3e-21 107.8 256 36.3
Potri.018G051900 Populus trichocarpa HOM05D000874 ORTHO05D001267 1.4e-20 106.7 261 34.9
Sabra06G0175800 Salix brachista HOM05D000874 ORTHO05D001267 1.4e-20 106.7 279 34.4
Sabra18G0048000 Salix brachista HOM05D000874 ORTHO05D001267 3.5e-19 102.1 279 33.3
TWI60G1333 Tripterygium wilfordii HOM05D000874 ORTHO05D001267 4.5e-19 101.7 215 39.1
Eucgr.B00613 Eucalyptus grandis HOM05D000874 ORTHO05D001049 7.7e-19 100.9 142 43.0
SGA_v2.0_scaffold28G11741 Striga asiatica HOM05D000874 ORTHO05D001267 1.5e-17 96.7 1337 25.1
PGR083G2399 Punica granatum HOM05D000874 ORTHO05D001267 6.1e-16 91.3 1169 23.3
MELO3C017235.2 Cucumis melo HOM05D000874 ORTHO05D001267 4.0e-15 88.6 881 25.1
Eucgr.B00612 Eucalyptus grandis HOM05D000874 ORTHO05D001049 4.0e-15 88.6 162 37.7
vmacro17620 Vaccinium macrocarpon HOM05D000874 ORTHO05D001267 6.8e-15 87.8 1027 24.1
Migut.I00513 Erythranthe guttata HOM05D000874 ORTHO05D001267 8.9e-15 87.4 838 26.4
TAR629G0267 Trochodendron aralioides HOM05D000874 ORTHO05D001267 9.8e-14 84.0 463 24.4
Nn3g17474 Nelumbo nucifera HOM05D000874 ORTHO05D001267 1.1e-12 80.5 274 29.2
ECA246G3190 Erigeron canadensis HOM05D000874 ORTHO05D001267 1.6e-11 76.6 220 31.8
Psat4g190920 Pisum sativum HOM05D000487 ORTHO05D001267 1.6e-11 76.6 143 37.1
HanXRQChr08g0230421 Helianthus annuus HOM05D000874 ORTHO05D001267 5.9e-11 74.7 307 28.7
ATR0177G006 Amborella trichopoda HOM05D000874 ORTHO05D001267 6.6e-10 71.2 1070 25.0
vmacro16488 Vaccinium macrocarpon HOM05D000874 ORTHO05D001267 1.9e-09 69.7 234 29.5
Actinidia18983 Actinidia chinensis HOM05D000874 ORTHO05D001267 2.5e-09 69.3 101 45.5
Actinidia16141 Actinidia chinensis HOM05D000874 ORTHO05D001267 4.3e-09 68.6 275 26.5
Lsat_1_v5_gn_5_23020 Lactuca sativa HOM05D000874 ORTHO05D001267 4.7e-08 65.1 128 41.4
CiPaw.11G055400 Carya illinoinensis HOM05D000874 ORTHO05D001267 6.2e-08 64.7 222 32.4
AUR62039647 Chenopodium quinoa HOM05D000874 ORTHO05D001267 1.0e-07 63.9 278 29.1
Lalb_Chr16g0391651 Lupinus albus HOM05D000874 ORTHO05D001267 6.8e-07 61.2 291 33.3
THA.LOC104801117 Tarenaya hassleriana HOM05D000874 ORTHO05D001267 5.8e-06 58.2 231 27.7


User provided reference genes

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