Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023146 Daucus carota HOM05D003996 ORTHO05D004665 0.0e+00 1266.9 711 100.0
DCAR_021140 Daucus carota HOM05D003996 ORTHO05D004665 5.5e-282 974.2 701 73.5
DCAR_012922 Daucus carota HOM05D003996 ORTHO05D004665 3.0e-179 632.9 710 51.8
Dinv39747 Davidia involucrata HOM05D003996 ORTHO05D004665 1.5e-178 630.6 711 55.3
Ciclev10014490m.g Citrus clementina HOM05D003996 ORTHO05D004665 3.8e-166 589.3 695 48.9
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 2.1e-164 583.6 673 51.6
Sabra14G0120200 Salix brachista HOM05D003996 ORTHO05D004665 6.1e-164 582.0 708 47.5
Potri.014G158200 Populus trichocarpa HOM05D003996 ORTHO05D004665 1.7e-161 573.9 691 47.5
Rhsim04G0050600 Rhododendron simsii HOM05D003996 ORTHO05D004665 1.7e-161 573.9 685 47.3
TWI36G0149 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 5.4e-160 568.9 683 48.6
Manes.12G069800 Manihot esculenta HOM05D003996 ORTHO05D004665 2.0e-159 567.0 688 52.9
TWI75G1163 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 2.0e-159 567.0 686 48.1
Nitab4.5_0008863g0010 Nicotiana tabacum HOM05D003996 ORTHO05D004665 3.8e-158 562.8 691 49.3
GSVIVG01030501001 Vitis vinifera HOM05D003996 ORTHO05D004665 3.8e-158 562.8 677 53.6
Gohir.A07G168800 Gossypium hirsutum HOM05D003996 ORTHO05D004665 8.6e-158 561.6 693 50.2
Duzib211G0403 Durio zibethinus HOM05D003996 ORTHO05D004665 1.5e-157 560.8 697 50.2
Atru.chr6.3252 Acer truncatum HOM05D003996 ORTHO05D004665 1.9e-157 560.5 688 48.1
Dinv08722 Davidia involucrata HOM05D003996 ORTHO05D004665 3.3e-157 559.7 647 49.8
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 3.3e-157 559.7 684 51.2
Gohir.D07G175200 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.2e-156 557.8 694 50.0
Gorai.001G196200 Gossypium raimondii HOM05D003996 ORTHO05D004665 1.6e-156 557.4 694 47.3
Thecc.01G181600 Theobroma cacao HOM05D003996 ORTHO05D004665 8.0e-156 555.1 680 47.9
MBI16_g26185_MAGBIO Magnolia biondii HOM05D003996 ORTHO05D004665 1.2e-154 551.2 689 46.7
vmacro09358 Vaccinium macrocarpon HOM05D003996 ORTHO05D004665 2.0e-154 550.4 709 45.8
CANSAT64G2545 Cannabis sativa HOM05D003996 ORTHO05D004665 1.3e-153 547.7 684 48.4
QL08p030755 Quercus lobata HOM05D003996 ORTHO05D004665 1.3e-153 547.7 694 47.1
ClCG02G018060 Citrullus lanatus HOM05D003996 ORTHO05D004665 1.7e-153 547.4 688 46.5
MD09G1113700 Malus domestica HOM05D003996 ORTHO05D004665 1.7e-153 547.4 748 44.9
Migut.H01245 Erythranthe guttata HOM05D003996 ORTHO05D004665 3.7e-153 546.2 716 45.5
Cc05_g02970 Coffea canephora HOM05D003996 ORTHO05D004665 4.9e-153 545.8 682 51.9
Solyc07g049350.3 Solanum lycopersicum HOM05D003996 ORTHO05D004665 6.4e-153 545.4 715 46.4
Potri.002G224900 Populus trichocarpa HOM05D003996 ORTHO05D004665 3.2e-152 543.1 696 46.0
Duzib138G0037 Durio zibethinus HOM05D003996 ORTHO05D004665 4.1e-152 542.7 668 47.9
PGSC0003DMG400000690 Solanum tuberosum HOM05D003996 ORTHO05D004665 7.0e-152 542.0 715 46.2
Sopen07g024690 Solanum pennellii HOM05D003996 ORTHO05D004665 9.2e-152 541.6 715 46.2
THA.LOC104801005 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 9.2e-152 541.6 688 45.1
Eucgr.K00757 Eucalyptus grandis HOM05D003996 ORTHO05D004665 7.8e-151 538.5 684 46.2
HanXRQChr16g0506421 Helianthus annuus HOM05D003996 ORTHO05D004665 1.1e-149 534.6 692 44.2
THA.LOC104826134 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 3.3e-149 533.1 690 45.4
Actinidia10801 Actinidia chinensis HOM05D003996 ORTHO05D004665 7.3e-149 531.9 635 48.0
CsaV3_6G015350 Cucumis sativus L. HOM05D003996 ORTHO05D004665 9.5e-149 531.6 688 45.3
Aqoxy1G02929 Aquilegia oxysepala HOM05D003996 ORTHO05D004665 1.6e-148 530.8 704 44.6
Lalb_Chr18g0049761 Lupinus albus HOM05D003996 ORTHO05D004665 6.2e-148 528.9 696 50.0
Lsat_1_v5_gn_7_95060 Lactuca sativa HOM05D003996 ORTHO05D004665 8.0e-148 528.5 677 44.9
Nitab4.5_0000482g0250 Nicotiana tabacum HOM05D003996 ORTHO05D004665 8.0e-148 528.5 682 47.5
MSTRG.14132 Avicennia marina HOM05D003996 ORTHO05D004665 1.4e-147 527.7 690 45.8
Lalb_Chr15g0080851 Lupinus albus HOM05D003996 ORTHO05D004665 1.8e-147 527.3 698 49.1
PGR142G3363 Punica granatum HOM05D003996 ORTHO05D004665 3.1e-147 526.6 704 45.0
Peaxi162Scf00921g00252 Petunia axillaris HOM05D003996 ORTHO05D004665 1.2e-146 524.6 679 48.7
TPR.G29036 Trifolium pratense HOM05D003996 ORTHO05D004665 4.4e-146 522.7 697 46.6
Lj6g0017826 Lotus japonicus HOM05D003996 ORTHO05D004665 3.7e-145 519.6 722 44.3
BcaC01g05877 Brassica carinata HOM05D003996 ORTHO05D004665 4.9e-145 519.2 696 47.0
A03p18420 Brassica napus HOM05D003996 ORTHO05D004665 6.4e-145 518.8 694 47.3
C03p21510 Brassica napus HOM05D003996 ORTHO05D004665 6.4e-145 518.8 696 47.0
PSO541G1393 Papaver somniferum HOM05D003996 ORTHO05D004665 6.4e-145 518.8 706 43.3
Prupe.3G210900 Prunus persica HOM05D003996 ORTHO05D004665 8.3e-145 518.5 790 41.9
Sed0004670 Sechium edule HOM05D003996 ORTHO05D004665 1.4e-144 517.7 688 44.0
Sp4g15330 Schrenkiella parvula HOM05D003996 ORTHO05D004665 1.9e-144 517.3 699 46.2
Medtr3g080400 Medicago truncatula HOM05D003996 ORTHO05D004665 5.4e-144 515.8 728 44.0
Oeu046908.1 Olea europaea HOM05D003996 ORTHO05D004665 9.2e-144 515.0 673 45.0
Gohir.D07G089000 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.2e-143 514.6 678 46.2
AT2G32970 Arabidopsis thaliana HOM05D003996 ORTHO05D004665 1.6e-143 514.2 705 44.7
TAR626G1560 Trochodendron aralioides HOM05D003996 ORTHO05D004665 1.6e-143 514.2 705 45.1
BolC3t14538H Brassica oleracea HOM05D003996 ORTHO05D004665 2.0e-143 513.8 689 47.3
Gorai.001G095400 Gossypium raimondii HOM05D003996 ORTHO05D004665 2.0e-143 513.8 678 46.0
Phvul.006G012800 Phaseolus vulgaris HOM05D003996 ORTHO05D004665 2.7e-143 513.5 703 46.7
MELO3C019738.2 Cucumis melo HOM05D003996 ORTHO05D004665 3.5e-143 513.1 674 45.4
Gohir.A07G082500 Gossypium hirsutum HOM05D003996 ORTHO05D004665 3.5e-143 513.1 679 50.1
Glyma.20G056800 Glycine max HOM05D003996 ORTHO05D004665 4.6e-143 512.7 722 48.1
Hund15359 Selenicereus undatus HOM05D003996 ORTHO05D004665 7.8e-143 511.9 676 45.1
ECA236G3366 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.0e-142 511.5 694 48.7
RcHm_v2.0_Chr2g0158131 Rosa chinensis HOM05D003996 ORTHO05D004665 1.3e-142 511.1 742 43.5
CAN.G1493.1 Capsicum annuum HOM05D003996 ORTHO05D004665 3.0e-142 510.0 687 45.9
AL4G28490 Arabidopsis lyrata HOM05D003996 ORTHO05D004665 6.6e-142 508.8 709 46.0
PSO210G1396 Papaver somniferum HOM05D003996 ORTHO05D004665 1.1e-141 508.1 697 45.3
Nn1g07292 Nelumbo nucifera HOM05D003996 ORTHO05D004665 2.5e-141 506.9 677 44.5
Thhalv10016338m.g Eutrema salsugineum HOM05D003996 ORTHO05D004665 5.6e-141 505.8 694 43.7
Carub.0004s1441 Capsella rubella HOM05D003996 ORTHO05D004665 1.6e-140 504.2 709 48.1
BcaB01g03955 Brassica carinata HOM05D003996 ORTHO05D004665 2.1e-140 503.8 691 47.9
PSO832G2142 Papaver somniferum HOM05D003996 ORTHO05D004665 2.8e-140 503.4 702 44.6
Nn1g03381 Nelumbo nucifera HOM05D003996 ORTHO05D004665 4.7e-140 502.7 698 45.8
Psat5g111680 Pisum sativum HOM05D003996 ORTHO05D004665 1.4e-139 501.1 684 49.1
FAN14G1081 Fragaria x ananassa HOM05D003996 ORTHO05D004665 4.0e-139 499.6 749 42.7
FvH4_6g42290 Fragaria vesca HOM05D003996 ORTHO05D004665 5.2e-139 499.2 749 42.6
PSO675G0796 Papaver somniferum HOM05D003996 ORTHO05D004665 8.9e-139 498.4 706 42.1
FAN02G1294 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.2e-138 498.0 766 42.7
CARHR126920 Cardamine hirsuta HOM05D003996 ORTHO05D004665 5.8e-138 495.7 714 42.9
FAN09G4790 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.7e-137 494.2 755 42.9
Aa31LG5G4630 Aethionema arabicum HOM05D003996 ORTHO05D004665 2.9e-137 493.4 689 45.3
SGA_v2.0_scaffold159G37554 Striga asiatica HOM05D003996 ORTHO05D004665 2.9e-137 493.4 713 42.6
AUR62032475 Chenopodium quinoa HOM05D003996 ORTHO05D004665 5.4e-136 489.2 688 43.0
ECA234G3864 Erigeron canadensis HOM05D003996 ORTHO05D004665 5.4e-136 489.2 675 43.0
FAN05G2256 Fragaria x ananassa HOM05D003996 ORTHO05D004665 9.2e-136 488.4 765 42.6
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 2.1e-135 487.3 683 43.9
Ca_16283_v3 Cicer arietinum L. HOM05D003996 ORTHO05D004665 3.0e-134 483.4 644 45.3
HanXRQChr10g0310161 Helianthus annuus HOM05D003996 ORTHO05D004665 3.0e-134 483.4 673 44.9
MD17G1103800 Malus domestica HOM05D003996 ORTHO05D004665 5.1e-134 482.6 745 42.6
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 8.6e-134 481.9 706 41.8
VMungo0540G1114 Vigna mungo HOM05D003996 ORTHO05D004665 1.5e-133 481.1 677 46.2
BraA05t20204Z Brassica rapa HOM05D003996 ORTHO05D004665 1.2e-132 478.0 682 44.4
A05p12660 Brassica napus HOM05D003996 ORTHO05D004665 2.8e-132 476.9 678 44.7
C04p16550 Brassica napus HOM05D003996 ORTHO05D004665 4.7e-132 476.1 679 45.4
BcaC02g11363 Brassica carinata HOM05D003996 ORTHO05D004665 8.1e-132 475.3 679 45.4
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea HOM05D003996 ORTHO05D004665 4.0e-131 473.0 717 42.0
BolC4t23207H Brassica oleracea HOM05D003996 ORTHO05D004665 1.5e-130 471.1 691 44.4
CSS0033567 Camellia sinensis var. sinensis HOM05D003996 ORTHO05D004665 1.3e-129 468.0 615 48.0
Lj8A129T88 Lonicera japonica HOM05D003996 ORTHO05D004665 4.9e-129 466.1 708 46.0
Lj1C780G17 Lonicera japonica HOM05D003996 ORTHO05D004665 1.9e-128 464.2 609 47.9
Sabra02G0172000 Salix brachista HOM05D003996 ORTHO05D004665 2.7e-127 460.3 771 40.1
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea HOM05D003996 ORTHO05D004665 2.3e-126 457.2 703 41.8
BraA03t11105Z Brassica rapa HOM05D003996 ORTHO05D004665 2.3e-126 457.2 638 46.7
Migut.M00422 Erythranthe guttata HOM05D003996 ORTHO05D004665 3.0e-126 456.8 675 41.9
EL10Ac6g13970 Beta vulgaris HOM05D003996 ORTHO05D004665 1.5e-125 454.5 657 42.0
Lsat_1_v5_gn_9_105800 Lactuca sativa HOM05D003996 ORTHO05D004665 2.5e-125 453.8 694 39.6
Zm00001eb256350 Zea mays HOM05D003996 ORTHO05D004665 8.1e-124 448.7 704 40.1
Oeu010926.4 Olea europaea HOM05D003996 ORTHO05D004665 1.8e-123 447.6 624 42.9
HanXRQChr10g0306531 Helianthus annuus HOM05D003996 ORTHO05D004665 6.8e-123 445.7 681 40.4
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 1.3e-121 441.4 685 41.5
Manes.13G066300 Manihot esculenta HOM05D003996 ORTHO05D004665 6.4e-121 439.1 635 42.5
AUR62040130 Chenopodium quinoa HOM05D003996 ORTHO05D004665 1.4e-120 438.0 663 41.2
Haze_12770 Corylus avellana HOM05D003996 ORTHO05D004665 5.4e-120 436.0 586 47.1
Lsat_1_v5_gn_5_124380 Lactuca sativa HOM05D003996 ORTHO05D004665 9.3e-120 435.3 691 40.4
Glyma.13G026700 Glycine max HOM05D003996 ORTHO05D004665 7.8e-119 432.2 494 51.0
SHI10040 Sapria himalayana HOM05D003996 ORTHO05D000023 3.9e-118 429.9 749 40.5
SGA_v2.0_scaffold70G23382 Striga asiatica HOM05D003996 ORTHO05D004665 1.6e-116 424.5 664 40.7
CiPaw.04G110600 Carya illinoinensis HOM05D003996 ORTHO05D004665 4.4e-114 416.4 513 47.2
Sed0016081 Sechium edule HOM05D003996 ORTHO05D004665 1.4e-112 411.4 630 41.6
Sc06g0009640 Simmondsia chinensis HOM05D003996 ORTHO05D004665 1.6e-111 407.9 513 45.2
CDE07G0144 Ceratophyllum demersum HOM05D003996 ORTHO05D004665 5.1e-110 402.9 700 37.3
Os02g0771800 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 3.4e-106 390.2 691 36.9
HPP92_010852 Vanilla planifolia HOM05D003996 ORTHO05D004665 4.5e-106 389.8 712 38.9
BcaNung06410 Brassica carinata HOM05D003996 ORTHO05D004665 1.6e-100 371.3 657 40.9
unitig_26.g9924 Utricularia gibba HOM05D003996 ORTHO05D004665 2.1e-100 370.9 530 42.3
BcaB02g10511 Brassica carinata HOM05D003996 ORTHO05D004665 1.4e-96 358.2 509 45.0
SEGI_14118 Sequoiadendron giganteum HOM05D003996 ORTHO05D004665 9.3e-96 355.5 717 36.7
COL.COLO4_21871 Corchorus olitorius HOM05D003996 ORTHO05D004665 4.6e-95 353.2 395 52.9
Sc05g0002040 Simmondsia chinensis HOM05D003996 ORTHO05D004665 5.7e-85 319.7 663 33.0
CANSAT01G0074 Cannabis sativa HOM05D003996 ORTHO05D004665 1.4e-83 315.1 665 33.4
Pp3c9_1750 Physcomitrium patens HOM05D003996 ORTHO05D004665 1.0e-81 308.9 742 33.8
AUR62001107 Chenopodium quinoa HOM05D003996 ORTHO05D004665 5.0e-81 306.6 672 33.2
AUR62008931 Chenopodium quinoa HOM05D003996 ORTHO05D004665 1.9e-80 304.7 692 32.8
Duzib133G0500 Durio zibethinus HOM05D003996 ORTHO05D004665 3.2e-80 303.9 658 32.7
Pp3c17_9940 Physcomitrium patens HOM05D003996 ORTHO05D004665 4.2e-80 303.5 712 32.0
Hund18404 Selenicereus undatus HOM05D003996 ORTHO05D004665 1.0e-78 298.9 669 33.2
CiPaw.03G155400 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.5e-77 295.0 382 44.2
SMO361G0133 Selaginella moellendorffii HOM05D003996 ORTHO05D004665 2.8e-76 290.8 680 34.1
EL10Ac7g17863 Beta vulgaris HOM05D003996 ORTHO05D004665 1.0e-73 282.3 663 31.7
HPP92_011782 Vanilla planifolia HOM05D003996 ORTHO05D004665 2.7e-71 274.2 376 40.4
Mapoly0071s0059 Marchantia polymorpha HOM05D003996 ORTHO05D004665 1.4e-70 271.9 800 29.9
CANSAT01G3237 Cannabis sativa HOM05D003996 ORTHO05D004665 2.6e-69 267.7 479 37.6
Ah.08g214450 Amaranthus hybridus HOM05D003996 ORTHO05D004665 1.7e-68 265.0 484 37.4
GSVIVG01003286001 Vitis vinifera HOM05D003996 ORTHO05D004665 5.3e-67 260.0 656 30.2
Zm00001eb297890 Zea mays HOM05D003996 ORTHO05D004665 9.1e-67 259.2 629 33.1
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis HOM05D003996 ORTHO05D004665 2.1e-63 248.1 621 31.2
Manes.13G046600 Manihot esculenta HOM05D003996 ORTHO05D004665 1.4e-59 235.3 520 35.6
Hund05567 Selenicereus undatus HOM05D003996 ORTHO05D004665 4.2e-56 223.8 524 31.9
CBR_g29855 Chara braunii HOM05D003996 ORTHO05D004665 1.8e-51 208.4 342 36.5
Cpa.g.sc132.19 Carica papaya HOM05D003996 ORTHO05D004665 1.1e-48 199.1 278 41.7
COL.COLO4_21870 Corchorus olitorius HOM05D003996 ORTHO05D004665 1.6e-47 195.3 213 50.2
CiPaw.03G155500 Carya illinoinensis HOM05D003996 ORTHO05D004665 9.8e-45 186.0 218 49.5
Actinidia03596 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.8e-38 165.2 203 46.8
Actinidia03595 Actinidia chinensis HOM05D003996 ORTHO05D004665 4.4e-37 160.6 109 69.7
CiPaw.04G110700 Carya illinoinensis HOM05D003996 ORTHO05D004665 8.3e-20 103.2 66 77.3
C09p40870 Brassica napus HOM05D003996 ORTHO05D004665 2.1e-18 98.6 70 68.6
Actinidia03594 Actinidia chinensis HOM05D003996 ORTHO05D004665 3.5e-18 97.8 69 66.7
Cre12.g513852 Chlamydomonas reinhardtii HOM05D003996 ORTHO05D004665 9.5e-16 89.7 159 38.4
MCO15G069 Micromonas commoda HOM05D003996 ORTHO05D004665 2.8e-15 88.2 153 37.9
unitig_26.g9925 Utricularia gibba HOM05D003996 ORTHO05D004665 4.4e-13 80.9 74 60.8
Thecc.01G223400 Theobroma cacao HOM05D003996 ORTHO05D004665 7.6e-13 80.1 180 31.1
Ah.08g214440 Amaranthus hybridus HOM05D003996 ORTHO05D004665 6.6e-09 67.0 67 52.2
Os05g0597400 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 8.6e-09 66.6 54 57.4
DCAR_019433 Daucus carota HOM05D003996 ORTHO05D004665 2.8e-07 61.6 70 48.6


User provided reference genes

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