Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 3.3e-170 601.7 310 100.0
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 4.5e-103 378.6 245 76.7
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 2.5e-101 372.9 254 74.4
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 2.7e-100 369.4 242 75.6
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 7.9e-100 367.9 240 76.2
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 1.5e-98 363.6 244 74.6
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 1.7e-97 360.1 258 70.2
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 2.2e-97 359.8 259 70.7
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 4.8e-97 358.6 245 71.4
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 9.1e-96 354.4 285 66.0
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 4.5e-95 352.1 282 63.8
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 5.9e-95 351.7 282 63.8
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 2.2e-94 349.7 262 67.2
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 2.2e-94 349.7 282 63.1
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 2.9e-94 349.4 293 66.2
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 6.5e-94 348.2 270 68.1
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 8.5e-94 347.8 283 66.1
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 1.1e-93 347.4 282 63.1
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 3.2e-93 345.9 269 67.7
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 4.2e-93 345.5 283 65.4
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 1.2e-92 344.0 311 60.5
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 1.6e-92 343.6 280 63.9
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 2.1e-92 343.2 309 58.9
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 2.1e-92 343.2 242 71.1
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 3.6e-92 342.4 276 65.2
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 4.7e-92 342.0 266 66.2
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 4.7e-92 342.0 280 63.6
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 6.1e-92 341.7 285 61.8
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 7.9e-92 341.3 218 75.7
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 7.9e-92 341.3 261 65.1
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 1.4e-91 340.5 278 63.3
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 1.4e-91 340.5 251 67.7
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 1.8e-91 340.1 274 64.2
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 2.3e-91 339.7 282 62.1
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 2.3e-91 339.7 279 65.2
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 3.0e-91 339.3 282 63.5
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 5.1e-91 338.6 242 70.7
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 5.1e-91 338.6 239 68.2
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 6.7e-91 338.2 288 62.5
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 8.8e-91 337.8 269 67.7
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 8.8e-91 337.8 269 66.5
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 2.0e-90 336.7 272 63.2
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 2.0e-90 336.7 243 70.4
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 9.7e-90 334.3 244 68.0
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 9.7e-90 334.3 277 62.1
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 9.7e-90 334.3 253 64.8
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.7e-89 333.6 257 65.0
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 3.7e-89 332.4 242 68.2
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 4.8e-89 332.0 249 64.7
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 4.8e-89 332.0 253 64.4
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 1.4e-88 330.5 281 61.2
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 1.8e-88 330.1 271 62.7
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 5.3e-88 328.6 218 72.0
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 6.9e-88 328.2 242 66.5
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 2.0e-87 326.6 270 61.9
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 2.6e-87 326.2 242 64.9
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 4.5e-87 325.5 256 64.1
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.9e-87 325.1 256 64.1
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 2.2e-86 323.2 269 60.6
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 2.9e-86 322.8 240 66.7
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 8.5e-86 321.2 254 64.6
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 3.2e-85 319.3 266 65.0
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 3.2e-85 319.3 271 64.2
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 9.4e-85 317.8 243 68.3
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 9.4e-85 317.8 262 61.5
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 1.6e-84 317.0 239 65.7
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 2.7e-84 316.2 269 61.0
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 6.1e-84 315.1 270 63.0
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 6.1e-84 315.1 270 63.0
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 8.0e-84 314.7 277 58.1
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 1.0e-83 314.3 242 64.9
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 1.0e-83 314.3 242 64.5
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 2.3e-83 313.2 312 58.3
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 5.2e-83 312.0 270 62.2
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 6.7e-83 311.6 243 66.7
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 8.8e-83 311.2 240 65.0
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 8.8e-83 311.2 306 55.2
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 2.0e-82 310.1 264 63.3
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 2.0e-82 310.1 235 67.7
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 5.7e-82 308.5 242 62.0
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 4.8e-81 305.4 240 62.9
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 6.3e-81 305.1 226 68.6
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 8.2e-81 304.7 240 66.2
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 1.1e-80 304.3 313 57.5
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 5.3e-80 302.0 225 67.1
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.0e-79 300.1 236 64.4
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 1.6e-76 290.4 284 58.5
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 2.1e-76 290.0 240 59.2
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 4.7e-76 288.9 260 60.0
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 4.7e-76 288.9 218 65.6
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 4.0e-75 285.8 249 62.7
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 4.0e-75 285.8 262 59.9
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 4.1e-72 275.8 250 59.2
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 4.1e-72 275.8 261 56.7
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 3.8e-70 269.2 218 64.2
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.5e-69 267.3 215 63.3
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 4.2e-69 265.8 240 59.2
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.8e-67 260.4 183 69.9
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 3.0e-67 259.6 231 55.0
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 1.5e-66 257.3 345 46.1
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 3.7e-65 252.7 220 61.8
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 4.8e-65 252.3 242 54.1
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 8.3e-65 251.5 173 72.8
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 1.1e-64 251.1 175 70.9
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.4e-64 250.8 222 54.5
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 2.3e-62 243.4 235 51.5
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.6e-60 237.3 234 54.3
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 1.2e-58 231.1 327 43.4
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 3.7e-57 226.1 182 61.5
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 4.5e-55 219.2 243 45.7
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 1.5e-50 204.1 249 45.0
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 9.8e-50 201.4 186 52.7
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.9e-49 199.9 238 47.1
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 1.4e-48 197.6 240 52.1
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 4.3e-45 186.0 224 48.2
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 1.6e-44 184.1 137 67.2
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 1.8e-43 180.6 112 78.6
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 1.5e-37 161.0 223 41.3
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 2.1e-31 140.6 130 56.9
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 3.6e-28 129.8 114 54.4
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 1.1e-27 128.3 199 37.7
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 1.9e-24 117.5 133 48.1
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 2.3e-22 110.5 73 65.8
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 3.0e-22 110.2 77 62.3
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 6.6e-22 109.0 73 71.2
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 1.9e-21 107.5 73 64.4
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 2.4e-19 100.5 78 61.5
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 2.4e-16 90.5 80 62.5
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 9.3e-16 88.6 167 30.5
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 5.1e-14 82.8 196 29.1
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 6.2e-12 75.9 72 55.6
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 6.2e-12 75.9 72 55.6
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 6.2e-12 75.9 72 55.6
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.4e-11 73.9 72 54.2
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 3.1e-11 73.6 72 54.2
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 9.9e-10 68.6 52 73.1
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 2.2e-09 67.4 55 61.8
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 2.9e-09 67.0 54 64.8
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 7.1e-08 62.4 58 53.4
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 3.5e-07 60.1 61 47.5
Cre03.g171100 Chlamydomonas reinhardtii HOM05D005617 ORTHO05D006847 5.1e-06 56.2 194 27.3


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