Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_023085 Daucus carota HOM05D007536 ORTHO05D009390 3.4e-99 366.7 188 100.0
Lj2C43T1 Lonicera japonica HOM05D007536 ORTHO05D009390 8.5e-26 122.9 184 39.7
GSVIVG01023504001 Vitis vinifera HOM05D007536 ORTHO05D009390 1.6e-24 118.6 168 42.3
Dinv18987 Davidia involucrata HOM05D007536 ORTHO05D009390 2.7e-24 117.9 184 38.6
CSS0008501 Camellia sinensis var. sinensis HOM05D007536 ORTHO05D009390 1.5e-22 112.1 187 36.9
Dinv24676 Davidia involucrata HOM05D007536 ORTHO05D009390 5.3e-20 103.6 124 42.7
Ciclev10019470m.g Citrus clementina HOM05D007536 ORTHO05D009390 1.2e-19 102.4 117 47.0
TAR362G0895 Trochodendron aralioides HOM05D007536 ORTHO05D009390 2.7e-19 101.3 182 33.5
Manes.08G053700 Manihot esculenta HOM05D007536 ORTHO05D009390 3.5e-19 100.9 124 44.4
TAR636G1433 Trochodendron aralioides HOM05D007536 ORTHO05D009390 5.9e-19 100.1 184 35.3
MSTRG.10543 Avicennia marina HOM05D007536 ORTHO05D009390 1.7e-18 98.6 117 45.3
CiPaw.15G107000 Carya illinoinensis HOM05D007536 ORTHO05D009390 6.5e-18 96.7 125 41.6
Hma1.2p1_2103F.1_g314080 Hydrangea macrophylla HOM05D007536 ORTHO05D009390 6.5e-18 96.7 179 36.3
Oeu000315.1 Olea europaea HOM05D007536 ORTHO05D009390 8.5e-18 96.3 119 46.2
Cpa.g.sc162.41 Carica papaya HOM05D007536 ORTHO05D009390 1.6e-16 92.0 120 40.8
Haze_04425 Corylus avellana HOM05D007536 ORTHO05D009390 2.1e-16 91.7 185 35.1
Atru.chr2.985 Acer truncatum HOM05D007536 ORTHO05D009390 1.0e-15 89.4 120 42.5
Rhsim09G0137000 Rhododendron simsii HOM05D007536 ORTHO05D009390 1.0e-15 89.4 183 33.9
Gohir.D13G172800 Gossypium hirsutum HOM05D007536 ORTHO05D009390 2.3e-15 88.2 146 37.7
FAN09G4642 Fragaria x ananassa HOM05D007536 ORTHO05D009390 3.0e-15 87.8 148 37.8
Gorai.013G187800 Gossypium raimondii HOM05D007536 ORTHO05D009390 5.2e-15 87.0 146 37.7
AUR62004838 Chenopodium quinoa HOM05D007536 ORTHO05D009390 1.2e-14 85.9 184 35.9
Gohir.A13G167300 Gossypium hirsutum HOM05D007536 ORTHO05D009390 1.5e-14 85.5 146 37.0
MD04G1230200 Malus domestica HOM05D007536 ORTHO05D009390 1.5e-14 85.5 144 35.4
FvH4_6g01910 Fragaria vesca HOM05D007536 ORTHO05D009390 2.6e-14 84.7 145 37.2
FAN14G0137 Fragaria x ananassa HOM05D007536 ORTHO05D009390 3.4e-14 84.3 179 35.2
Prupe.6G350100 Prunus persica HOM05D007536 ORTHO05D009390 4.4e-14 84.0 139 35.3
Aqoxy5G00211 Aquilegia oxysepala HOM05D007536 ORTHO05D009390 5.7e-14 83.6 174 34.5
CANSAT54G0748 Cannabis sativa HOM05D007536 ORTHO05D009390 5.7e-14 83.6 186 33.9
Migut.L01514 Erythranthe guttata HOM05D007536 ORTHO05D009390 5.7e-14 83.6 194 33.0
FAN05G1587 Fragaria x ananassa HOM05D007536 ORTHO05D009390 5.7e-14 83.6 145 37.9
RcHm_v2.0_Chr3g0449641 Rosa chinensis HOM05D007536 ORTHO05D009390 5.7e-14 83.6 150 36.0
Glyma.20G222900 Glycine max HOM05D007536 ORTHO05D009390 1.7e-13 82.0 124 37.9
Sed0012628 Sechium edule HOM05D007536 ORTHO05D009390 1.7e-13 82.0 118 39.8
Thecc.05G270900 Theobroma cacao HOM05D007536 ORTHO05D009390 1.7e-13 82.0 135 37.8
FAN05G2252 Fragaria x ananassa HOM05D007536 ORTHO05D009390 4.8e-13 80.5 111 39.6
Eucgr.B02149 Eucalyptus grandis HOM05D007536 ORTHO05D009390 6.3e-13 80.1 114 40.4
FAN14G3895 Fragaria x ananassa HOM05D007536 ORTHO05D009390 6.3e-13 80.1 111 39.6
Sabra19G0031900 Salix brachista HOM05D007536 ORTHO05D009390 8.3e-13 79.7 172 36.6
vmacro10366 Vaccinium macrocarpon HOM05D007536 ORTHO05D009390 8.3e-13 79.7 129 36.4
Duzib177G0261 Durio zibethinus HOM05D007536 ORTHO05D009390 1.1e-12 79.3 178 32.0
Sp1g07270 Schrenkiella parvula HOM05D007536 ORTHO05D009390 1.4e-12 79.0 125 40.0
MBI10_g13809_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 1.8e-12 78.6 124 37.9
Carub.0001s0797 Capsella rubella HOM05D007536 ORTHO05D009390 3.1e-12 77.8 122 41.0
AT1G08610 Arabidopsis thaliana HOM05D007536 ORTHO05D009390 4.1e-12 77.4 131 38.9
QL03p030462 Quercus lobata HOM05D007536 ORTHO05D009390 4.1e-12 77.4 176 34.7
SalBow1G3025 Salvia bowleyana HOM05D007536 ORTHO05D009390 5.4e-12 77.0 67 55.2
Ah.04g163100 Amaranthus hybridus HOM05D007536 ORTHO05D009390 7.0e-12 76.6 123 37.4
Lsat_1_v5_gn_8_24901 Lactuca sativa HOM05D007536 ORTHO05D009390 7.0e-12 76.6 175 34.9
PGR142G0030 Punica granatum HOM05D007536 ORTHO05D009390 9.1e-12 76.3 172 32.6
COL.COLO4_15481 Corchorus olitorius HOM05D007536 ORTHO05D009390 1.2e-11 75.9 174 33.3
Ca_10014_v3 Cicer arietinum L. HOM05D007536 ORTHO05D009390 1.6e-11 75.5 117 40.2
HanXRQChr07g0204491 Helianthus annuus HOM05D007536 ORTHO05D009390 1.6e-11 75.5 175 32.0
TWI38G0843 Tripterygium wilfordii HOM05D007536 ORTHO05D009390 1.6e-11 75.5 120 38.3
COL.COLO4_15479 Corchorus olitorius HOM05D007536 ORTHO05D009390 3.5e-11 74.3 176 33.0
Gohir.A11G247400 Gossypium hirsutum HOM05D007536 ORTHO05D009390 3.5e-11 74.3 139 36.0
AL1G19040 Arabidopsis lyrata HOM05D007536 ORTHO05D009390 5.9e-11 73.6 132 37.1
Aa31LG11G11200 Aethionema arabicum HOM05D007536 ORTHO05D009390 7.7e-11 73.2 118 38.1
MELO3C010129.2 Cucumis melo HOM05D007536 ORTHO05D009390 7.7e-11 73.2 118 35.6
PSO210G0145 Papaver somniferum HOM05D007536 ORTHO05D009390 1.0e-10 72.8 132 35.6
Phvul.008G151830 Phaseolus vulgaris HOM05D007536 ORTHO05D009390 1.7e-10 72.0 109 40.4
Potri.019G019200 Populus trichocarpa HOM05D007536 ORTHO05D009390 1.7e-10 72.0 172 34.3
Sc20g0000630 Simmondsia chinensis HOM05D007536 ORTHO05D009390 2.2e-10 71.6 85 44.7
Gohir.D11G257700 Gossypium hirsutum HOM05D007536 ORTHO05D009390 2.9e-10 71.2 137 36.5
Gorai.007G276000 Gossypium raimondii HOM05D007536 ORTHO05D009390 2.9e-10 71.2 137 36.5
Thhalv10007213m.g Eutrema salsugineum HOM05D007536 ORTHO05D009390 3.8e-10 70.9 141 34.8
AUR62040928 Chenopodium quinoa HOM05D007536 ORTHO05D009390 5.0e-10 70.5 186 32.8
ClCG03G009740 Citrullus lanatus HOM05D007536 ORTHO05D009390 5.0e-10 70.5 118 35.6
Medtr1g080120 Medicago truncatula HOM05D007536 ORTHO05D009390 8.5e-10 69.7 116 41.4
BraA09t41926Z Brassica rapa HOM05D007536 ORTHO05D009390 1.5e-09 68.9 73 47.9
Actinidia34755 Actinidia chinensis HOM05D007536 ORTHO05D009390 1.9e-09 68.6 93 41.9
Peaxi162Scf00528g00022 Petunia axillaris HOM05D007536 ORTHO05D009390 1.9e-09 68.6 145 36.6
THA.LOC104821264 Tarenaya hassleriana HOM05D007536 ORTHO05D009390 1.9e-09 68.6 116 37.9
A09p65820 Brassica napus HOM05D007536 ORTHO05D009390 2.5e-09 68.2 73 47.9
Cc02_g08820 Coffea canephora HOM05D007536 ORTHO05D009390 3.2e-09 67.8 175 33.7
Nitab4.5_0003780g0060 Nicotiana tabacum HOM05D007536 ORTHO05D009390 3.2e-09 67.8 136 35.3
TPR.G22324 Trifolium pratense HOM05D007536 ORTHO05D009390 3.2e-09 67.8 175 31.4
CsaV3_1G045080 Cucumis sativus L. HOM05D007536 ORTHO05D009390 5.5e-09 67.0 117 35.0
ECA233G3269 Erigeron canadensis HOM05D007536 ORTHO05D009390 5.5e-09 67.0 176 33.5
Sed0002849 Sechium edule HOM05D007536 ORTHO05D009390 5.5e-09 67.0 122 35.2
Sopen04g005180 Solanum pennellii HOM05D007536 ORTHO05D009390 5.5e-09 67.0 129 34.9
CARHR008520 Cardamine hirsuta HOM05D007536 ORTHO05D009390 7.2e-09 66.6 127 33.1
Nitab4.5_0006737g0040 Nicotiana tabacum HOM05D007536 ORTHO05D009390 7.2e-09 66.6 116 37.1
CAN.G358.142 Capsicum annuum HOM05D007536 ORTHO05D009390 1.2e-08 65.9 127 36.2
C08p49910 Brassica napus HOM05D007536 ORTHO05D009390 3.6e-08 64.3 73 47.9
Solyc04g010050.4 Solanum lycopersicum HOM05D007536 ORTHO05D009390 3.6e-08 64.3 128 36.7
BcaC07g41933 Brassica carinata HOM05D007536 ORTHO05D009390 4.7e-08 63.9 73 47.9
BolC8t52519H Brassica oleracea HOM05D007536 ORTHO05D009390 4.7e-08 63.9 73 47.9
Nn1g02810 Nelumbo nucifera HOM05D007536 ORTHO05D009390 4.7e-08 63.9 181 26.0
Lj5g0027095 Lotus japonicus HOM05D007536 ORTHO05D009390 1.4e-07 62.4 109 36.7
Lalb_Chr02g0149121 Lupinus albus HOM05D007536 ORTHO05D009390 2.3e-07 61.6 118 32.2
VMungo0720G1101 Vigna mungo HOM05D007536 ORTHO05D009390 3.0e-07 61.2 110 37.3
SGA_v2.0_scaffold21G09411 Striga asiatica HOM05D005874 ORTHO05D007206 6.8e-07 60.1 57 56.1


User provided reference genes

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