Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 2.2e-97 359.0 182 100.0
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 8.5e-70 267.3 179 74.9
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 1.9e-69 266.2 166 76.5
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 2.5e-69 265.8 180 73.9
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.0e-67 260.4 171 75.4
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 1.4e-67 260.0 160 78.8
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.8e-67 259.6 177 77.4
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 1.8e-67 259.6 180 75.0
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 4.0e-67 258.5 172 75.0
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 6.8e-67 257.7 170 76.5
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 8.8e-67 257.3 171 76.0
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 8.8e-67 257.3 180 69.4
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 1.2e-66 256.9 170 75.3
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 1.5e-66 256.5 185 71.9
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 2.6e-66 255.8 179 73.7
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 3.4e-66 255.4 169 76.9
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 7.5e-66 254.2 175 70.3
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.3e-65 253.4 166 75.3
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.3e-65 253.4 157 76.4
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 2.2e-65 252.7 178 71.3
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 2.2e-65 252.7 178 70.8
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 2.2e-65 252.7 177 71.2
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 4.9e-65 251.5 177 70.1
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 6.3e-65 251.1 188 67.6
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 1.1e-64 250.4 173 70.5
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.4e-64 250.0 174 70.7
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.4e-64 250.0 179 72.1
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 1.8e-64 249.6 177 70.1
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 2.4e-64 249.2 185 68.6
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 2.4e-64 249.2 181 70.7
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.4e-64 249.2 169 73.4
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 4.1e-64 248.4 188 68.1
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 5.4e-64 248.1 174 70.1
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 7.0e-64 247.7 169 72.8
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 9.2e-64 247.3 179 71.5
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 1.6e-63 246.5 172 69.8
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 1.6e-63 246.5 165 70.9
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 1.6e-63 246.5 181 69.1
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.6e-63 246.5 159 76.1
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.6e-63 246.5 174 69.5
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 2.7e-63 245.7 178 72.5
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 3.5e-63 245.4 179 66.5
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 3.5e-63 245.4 159 75.5
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 4.5e-63 245.0 181 69.6
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.3e-62 243.4 174 68.4
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 2.9e-62 242.3 168 73.2
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 2.9e-62 242.3 174 69.0
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 6.6e-62 241.1 174 67.8
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 6.6e-62 241.1 181 69.6
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 8.6e-62 240.7 177 67.2
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 1.9e-61 239.6 177 68.9
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 1.9e-61 239.6 169 71.6
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 1.9e-61 239.6 185 70.3
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 3.3e-61 238.8 171 66.1
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 7.3e-61 237.7 185 67.0
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 9.5e-61 237.3 184 65.8
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 9.5e-61 237.3 166 72.3
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 1.2e-60 236.9 181 65.7
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 1.6e-60 236.5 186 67.7
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 1.6e-60 236.5 182 66.5
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 6.1e-60 234.6 174 68.4
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 1.8e-59 233.0 178 70.8
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 1.8e-59 233.0 176 65.9
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 2.3e-59 232.6 162 73.5
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 2.6e-58 229.2 173 68.2
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 9.8e-58 227.3 173 68.2
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 4.9e-57 224.9 180 65.6
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 4.9e-57 224.9 163 68.7
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 1.1e-56 223.8 185 63.2
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 1.8e-56 223.0 172 65.1
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 2.4e-56 222.6 169 65.1
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 4.1e-56 221.9 171 65.5
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 4.1e-56 221.9 139 74.8
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 4.1e-56 221.9 171 66.1
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 5.4e-56 221.5 172 64.5
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 5.4e-56 221.5 172 64.5
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 1.2e-55 220.3 172 64.0
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.2e-55 220.3 172 64.0
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.6e-55 219.9 172 64.0
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 1.3e-54 216.9 171 62.6
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 1.7e-54 216.5 134 79.1
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 3.0e-54 215.7 182 62.6
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.0e-54 215.7 183 61.2
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.5e-53 213.4 172 62.2
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 4.3e-53 211.8 241 49.0
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 2.1e-52 209.5 144 74.3
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 2.1e-52 209.5 171 63.2
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 8.9e-51 204.1 130 78.5
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 7.5e-50 201.1 134 73.9
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 8.3e-49 197.6 137 70.1
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 1.4e-48 196.8 175 58.3
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 4.1e-48 195.3 129 74.4
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.2e-42 177.2 122 71.3
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 4.4e-42 175.3 180 51.1
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.1e-39 166.4 189 52.4
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 6.6e-38 161.4 192 47.9
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 1.9e-37 159.8 148 58.8
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.3e-37 159.1 162 51.2
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.3e-35 152.9 168 53.6
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 6.6e-30 134.8 97 72.2
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 1.4e-27 127.1 82 70.7
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 5.2e-27 125.2 181 40.9
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 4.2e-24 115.5 80 70.0
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 2.1e-23 113.2 106 57.5
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 4.6e-23 112.1 119 51.3
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 4.3e-21 105.5 165 43.6
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.4e-19 100.5 68 73.5
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 2.4e-19 99.8 174 33.3
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 3.8e-17 92.4 141 39.0
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 6.7e-14 81.6 69 60.9
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 2.2e-09 66.6 40 77.5
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 5.5e-08 62.0 79 43.0
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 3.9e-06 55.8 36 69.4


User provided reference genes

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