Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 1.7e-115 419.5 224 100.0
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 3.5e-65 252.3 171 78.4
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 4.6e-65 251.9 192 74.0
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 6.0e-65 251.5 172 77.3
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 6.6e-64 248.1 220 64.5
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 8.6e-64 247.7 170 78.8
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 3.3e-63 245.7 217 66.8
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 4.3e-63 245.4 176 75.0
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 7.3e-63 244.6 191 73.3
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 1.6e-62 243.4 174 75.3
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 2.8e-62 242.7 223 63.2
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 3.6e-62 242.3 170 75.9
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 1.1e-61 240.7 218 64.2
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 1.1e-61 240.7 173 76.9
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 1.4e-61 240.4 174 74.7
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 3.1e-61 239.2 175 73.7
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 4.0e-61 238.8 171 77.2
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 4.0e-61 238.8 174 74.1
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 5.2e-61 238.4 186 71.5
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 6.8e-61 238.0 169 78.1
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 8.9e-61 237.7 175 72.6
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 8.9e-61 237.7 171 74.9
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 1.5e-60 236.9 183 72.7
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 1.5e-60 236.9 224 60.3
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.5e-60 236.9 174 74.7
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.6e-60 236.1 223 61.4
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 2.6e-60 236.1 174 74.7
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 3.4e-60 235.7 174 74.1
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 4.4e-60 235.3 204 66.2
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 7.6e-60 234.6 183 73.2
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 7.6e-60 234.6 177 73.4
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 1.3e-59 233.8 182 73.1
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 2.2e-59 233.0 177 75.1
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 2.2e-59 233.0 171 73.7
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.9e-59 232.6 171 74.3
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 4.9e-59 231.9 180 72.2
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 4.9e-59 231.9 183 68.3
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 4.9e-59 231.9 182 70.9
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 4.9e-59 231.9 174 73.0
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 6.4e-59 231.5 182 71.4
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 6.4e-59 231.5 171 73.7
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 6.4e-59 231.5 223 60.5
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 8.4e-59 231.1 181 72.4
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 1.1e-58 230.7 204 64.7
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 1.1e-58 230.7 173 70.5
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.4e-58 230.3 171 74.3
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.4e-58 230.3 173 71.1
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 1.9e-58 229.9 219 61.6
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 1.9e-58 229.9 170 72.9
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 1.9e-58 229.9 182 72.0
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 1.9e-58 229.9 206 65.5
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 2.4e-58 229.6 181 69.6
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 2.4e-58 229.6 171 72.5
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 4.1e-58 228.8 201 64.7
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 5.4e-58 228.4 185 70.3
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 5.4e-58 228.4 172 72.1
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 7.1e-58 228.0 201 66.7
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 9.2e-58 227.6 202 63.9
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 9.2e-58 227.6 202 63.9
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 1.2e-57 227.3 173 69.9
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 1.6e-57 226.9 205 65.4
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 2.1e-57 226.5 170 74.1
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 2.1e-57 226.5 175 71.4
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 3.5e-57 225.7 171 71.3
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 4.6e-57 225.3 175 71.4
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 7.8e-57 224.6 170 73.5
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 7.8e-57 224.6 196 66.8
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 1.3e-56 223.8 173 69.9
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 5.1e-56 221.9 184 66.8
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 8.6e-56 221.1 182 68.7
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 1.1e-55 220.7 191 64.4
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.1e-55 220.7 168 73.8
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 1.5e-55 220.3 198 63.6
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 5.6e-55 218.4 195 65.1
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 7.3e-55 218.0 174 69.5
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 7.3e-55 218.0 134 87.3
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 1.2e-54 217.2 172 68.0
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 1.2e-54 217.2 219 59.8
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 1.6e-54 216.9 179 68.7
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 1.6e-54 216.9 179 68.7
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 3.6e-54 215.7 195 64.1
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 1.4e-53 213.8 128 89.1
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.8e-53 213.4 170 68.8
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.8e-53 213.4 137 81.8
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 1.8e-53 213.4 160 74.4
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 2.4e-53 213.0 182 68.1
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 2.6e-52 209.5 170 69.4
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 2.6e-52 209.5 174 66.1
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 7.6e-52 208.0 162 72.8
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 7.6e-52 208.0 148 77.0
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 8.4e-51 204.5 150 74.7
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 1.4e-50 203.8 188 59.0
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 1.6e-49 200.3 124 86.3
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.1e-49 199.9 175 64.6
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 2.1e-49 199.9 159 70.4
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 2.7e-49 199.5 175 65.1
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 7.8e-49 198.0 128 82.0
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 1.3e-48 197.2 174 63.2
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.7e-48 196.8 131 77.9
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.7e-48 196.8 131 77.9
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 5.6e-47 191.8 129 79.1
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 1.3e-46 190.7 242 50.4
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 3.6e-46 189.1 124 76.6
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 3.1e-45 186.0 264 47.0
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 1.3e-43 180.6 169 59.8
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 9.3e-42 174.5 146 61.0
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 1.7e-40 170.2 150 64.0
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 5.1e-40 168.7 168 54.2
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 1.9e-39 166.8 156 55.8
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 2.2e-35 153.3 108 74.1
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 3.0e-32 142.9 168 48.2
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 7.6e-28 128.3 168 50.6
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 6.0e-25 118.6 98 59.2
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 1.0e-24 117.9 120 60.0
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 1.8e-24 117.1 99 66.7
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 9.6e-23 111.3 139 46.0
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 2.8e-22 109.8 127 44.1
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 6.3e-22 108.6 89 64.0
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.8e-19 99.4 85 68.2
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 1.6e-17 94.0 71 74.6
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 1.3e-11 74.3 148 37.8


User provided reference genes

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