Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 2.9e-134 481.9 237 100.0
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 1.1e-104 383.6 215 85.1
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 1.4e-104 383.3 216 85.6
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 4.0e-104 381.7 218 84.4
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 1.2e-103 380.2 214 85.5
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 1.5e-103 379.8 223 81.6
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 4.5e-103 378.3 213 86.4
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.0e-102 377.1 213 85.4
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 1.3e-102 376.7 212 87.3
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 1.7e-102 376.3 223 79.4
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 6.5e-102 374.4 216 85.2
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 1.1e-101 373.6 221 81.4
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 1.4e-101 373.2 222 82.4
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 2.5e-101 372.5 222 82.4
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 5.5e-101 371.3 213 83.1
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 7.1e-101 370.9 213 84.5
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 7.1e-101 370.9 216 83.3
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 7.1e-101 370.9 217 81.6
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 1.2e-100 370.2 214 84.1
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 2.1e-100 369.4 223 77.1
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 2.7e-100 369.0 223 77.1
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 4.6e-100 368.2 212 84.4
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 7.9e-100 367.5 220 78.6
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 7.9e-100 367.5 223 77.1
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.0e-99 367.1 212 82.1
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 1.8e-99 366.3 222 79.7
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 1.8e-99 366.3 213 81.7
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 2.3e-99 365.9 226 79.6
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 2.3e-99 365.9 212 81.6
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 3.0e-99 365.5 223 76.7
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 6.7e-99 364.4 218 81.2
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 8.7e-99 364.0 214 81.3
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 1.1e-98 363.6 228 78.1
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 1.1e-98 363.6 216 82.4
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 1.1e-98 363.6 218 80.7
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 1.5e-98 363.2 222 78.4
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.9e-98 362.8 218 80.7
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 4.3e-98 361.7 219 80.8
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 7.4e-98 360.9 217 81.1
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 1.3e-97 360.1 213 80.8
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 1.3e-97 360.1 224 77.2
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 1.6e-97 359.8 213 80.3
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 2.2e-97 359.4 218 78.9
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 2.8e-97 359.0 217 80.6
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 6.3e-97 357.8 214 80.4
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 1.1e-96 357.1 214 78.0
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 2.4e-96 355.9 213 81.7
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 4.1e-96 355.1 212 80.7
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 4.1e-96 355.1 222 77.5
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 4.1e-96 355.1 222 77.5
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 6.9e-96 354.4 210 80.0
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 6.9e-96 354.4 211 80.6
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 1.2e-95 353.6 213 78.9
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 1.2e-95 353.6 214 80.8
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 1.5e-95 353.2 200 84.0
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 1.5e-95 353.2 213 78.4
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.4e-95 352.1 213 78.4
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 4.5e-95 351.7 214 76.6
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 5.9e-95 351.3 218 78.9
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 5.9e-95 351.3 213 77.9
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 7.7e-95 350.9 217 78.3
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 7.7e-95 350.9 214 81.3
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 1.0e-94 350.5 223 77.1
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 2.2e-94 349.4 219 78.5
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 2.2e-94 349.4 217 77.9
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 6.5e-94 347.8 217 78.3
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 1.9e-93 346.3 217 78.3
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 2.5e-93 345.9 219 77.6
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 3.2e-93 345.5 212 76.9
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 3.2e-93 345.5 228 75.0
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 5.5e-93 344.7 216 79.6
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 7.2e-93 344.4 219 78.1
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 7.2e-93 344.4 223 74.4
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 7.2e-93 344.4 217 76.5
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 7.2e-93 344.4 214 77.1
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 1.6e-92 343.2 217 77.4
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 1.6e-92 343.2 217 76.5
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 7.9e-92 340.9 217 76.0
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 7.9e-92 340.9 217 76.0
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 7.9e-92 340.9 217 76.0
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 1.0e-91 340.5 214 75.7
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 1.4e-91 340.1 219 76.3
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 1.4e-91 340.1 217 76.0
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 1.8e-91 339.7 217 76.0
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 1.8e-91 339.7 217 76.0
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 2.0e-90 336.3 205 80.0
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 1.1e-88 330.5 222 73.0
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 4.5e-87 325.1 223 71.7
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 2.9e-86 322.4 198 76.8
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 5.1e-83 311.6 214 69.2
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 2.0e-82 309.7 217 71.9
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 4.4e-82 308.5 216 69.9
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 6.3e-81 304.7 219 68.9
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 2.4e-80 302.8 213 72.3
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 5.3e-80 301.6 215 67.9
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 9.1e-80 300.8 198 71.7
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 1.0e-78 297.4 193 75.1
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.6e-76 290.0 210 69.5
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 2.3e-75 286.2 192 68.2
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 8.8e-75 284.3 192 73.4
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 3.1e-72 275.8 147 89.1
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 5.3e-72 275.0 207 64.3
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 1.2e-71 273.9 199 63.8
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 7.2e-69 264.6 152 82.9
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 4.7e-68 261.9 189 65.6
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 1.4e-67 260.4 148 83.8
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 6.8e-67 258.1 148 82.4
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.1e-64 250.8 259 53.7
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 8.0e-60 234.6 145 75.9
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 7.0e-56 221.5 184 56.5
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 4.9e-49 198.7 190 50.0
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 4.3e-45 185.7 101 87.1
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 1.8e-35 153.7 186 47.8
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 5.2e-27 125.6 87 67.8
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 8.9e-27 124.8 66 87.9
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 3.4e-26 122.9 85 70.6
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 9.2e-24 114.8 86 61.6
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 3.9e-22 109.4 67 76.1
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 7.3e-21 105.1 87 58.6
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 3.4e-18 96.3 144 42.4
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 6.4e-17 92.0 64 65.6
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 1.7e-09 67.4 41 73.2
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 1.6e-07 60.8 151 27.2
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 2.1e-07 60.5 151 26.5
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 2.1e-07 60.5 151 26.5
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 2.7e-07 60.1 155 28.4
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 2.7e-07 60.1 155 28.4
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 2.7e-07 60.1 155 28.4
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 2.7e-07 60.1 155 28.4
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 4.6e-07 59.3 151 26.5
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 7.9e-07 58.5 156 27.6
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 1.3e-06 57.8 150 28.0
Lj1g0006679 Lotus japonicus HOM05D006539 ORTHO05D008694 2.3e-06 57.0 151 28.5
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 2.3e-06 57.0 151 27.2
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 2.3e-06 57.0 151 27.2
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 3.0e-06 56.6 151 26.5
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 3.0e-06 56.6 150 27.3
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 3.9e-06 56.2 191 24.6
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 5.1e-06 55.8 142 28.9
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 6.6e-06 55.5 151 26.5
MELO3C013239.2 Cucumis melo HOM05D000031 ORTHO05D000030 8.7e-06 55.1 33 72.7
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 8.7e-06 55.1 151 26.5


User provided reference genes

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