Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022833 Daucus carota HOM05D004868 ORTHO05D006030 1.9e-165 585.9 320 100.0
Ah.06g192760 Amaranthus hybridus HOM05D004868 ORTHO05D006030 6.8e-139 497.7 267 86.1
Ca_13816_v3 Cicer arietinum L. HOM05D004868 ORTHO05D006030 2.0e-138 496.1 267 85.8
QL03p000170 Quercus lobata HOM05D004868 ORTHO05D006030 1.7e-137 493.0 261 87.4
QL03p000506 Quercus lobata HOM05D004868 ORTHO05D006030 2.2e-137 492.7 262 86.6
Medtr4g025410 Medicago truncatula HOM05D004868 ORTHO05D006030 2.9e-137 492.3 261 86.6
Ah.04g160130 Amaranthus hybridus HOM05D004868 ORTHO05D006030 3.8e-137 491.9 267 85.0
TPR.G7590 Trifolium pratense HOM05D004868 ORTHO05D006030 3.8e-137 491.9 267 85.0
Haze_04309 Corylus avellana HOM05D004868 ORTHO05D006030 4.9e-137 491.5 263 85.6
Actinidia33836 Actinidia chinensis HOM05D004868 ORTHO05D006030 8.4e-137 490.7 265 86.0
AUR62005015 Chenopodium quinoa HOM05D004868 ORTHO05D006030 1.1e-136 490.3 263 86.7
CANSAT54G1013 Cannabis sativa HOM05D004868 ORTHO05D006030 1.9e-136 489.6 263 86.3
Nitab4.5_0002840g0160 Nicotiana tabacum HOM05D004868 ORTHO05D006030 2.4e-136 489.2 269 84.4
Potri.005G046300 Populus trichocarpa HOM05D004868 ORTHO05D006030 2.4e-136 489.2 263 85.6
Nitab4.5_0002361g0200 Nicotiana tabacum HOM05D004868 ORTHO05D006030 3.2e-136 488.8 269 84.0
Ciclev10001724m.g Citrus clementina HOM05D004868 ORTHO05D006030 4.1e-136 488.4 259 86.9
Gohir.A11G257000 Gossypium hirsutum HOM05D004868 ORTHO05D006030 5.4e-136 488.0 263 86.3
TPR.G39359 Trifolium pratense HOM05D004868 ORTHO05D006030 7.1e-136 487.6 267 84.6
Potri.013G034000 Populus trichocarpa HOM05D004868 ORTHO05D006030 9.2e-136 487.3 263 86.3
Cfa006482 Carpinus fangiana HOM05D004868 ORTHO05D006030 2.7e-135 485.7 263 84.8
Solyc01g098040.3 Solanum lycopersicum HOM05D004868 ORTHO05D006030 2.7e-135 485.7 263 84.8
EL10Ac4g09208 Beta vulgaris HOM05D004868 ORTHO05D006030 4.6e-135 485.0 267 83.9
Rhsim05G0148800 Rhododendron simsii HOM05D004868 ORTHO05D006030 4.6e-135 485.0 263 85.9
Sopen01g041620 Solanum pennellii HOM05D004868 ORTHO05D006030 4.6e-135 485.0 263 84.8
PGSC0003DMG400022466 Solanum tuberosum HOM05D004868 ORTHO05D006030 6.0e-135 484.6 263 84.4
CSS0010529 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 1.0e-134 483.8 266 84.2
TWI12G1223 Tripterygium wilfordii HOM05D004868 ORTHO05D006030 1.3e-134 483.4 265 84.9
Duzib177G0825 Durio zibethinus HOM05D004868 ORTHO05D006030 1.7e-134 483.0 263 85.2
Hma1.2p1_0332F.1_g127880 Hydrangea macrophylla HOM05D004868 ORTHO05D006030 1.7e-134 483.0 263 83.7
CAN.G134.187 Capsicum annuum HOM05D004868 ORTHO05D006030 2.3e-134 482.6 263 84.4
Gorai.007G286600 Gossypium raimondii HOM05D004868 ORTHO05D006030 2.3e-134 482.6 263 85.2
arahy.Tifrunner.gnm1.ann1.VSGL27 Arachis hypogaea HOM05D004868 ORTHO05D006030 3.9e-134 481.9 263 84.8
Phvul.010G080900 Phaseolus vulgaris HOM05D004868 ORTHO05D006030 3.9e-134 481.9 263 85.6
arahy.Tifrunner.gnm1.ann1.WET4Y7 Arachis hypogaea HOM05D004868 ORTHO05D006030 5.1e-134 481.5 263 84.8
Gohir.D11G266800 Gossypium hirsutum HOM05D004868 ORTHO05D006030 5.1e-134 481.5 263 85.2
Sabra05G0042300 Salix brachista HOM05D004868 ORTHO05D006030 5.1e-134 481.5 263 84.0
Lsat_1_v5_gn_9_40320 Lactuca sativa HOM05D004868 ORTHO05D006030 1.5e-133 479.9 263 84.0
TWI36G0026 Tripterygium wilfordii HOM05D004868 ORTHO05D006030 1.5e-133 479.9 262 85.1
Atru.chr2.656 Acer truncatum HOM05D004868 ORTHO05D006030 1.9e-133 479.6 263 84.8
Manes.09G157900 Manihot esculenta HOM05D004868 ORTHO05D006030 1.9e-133 479.6 263 84.0
SalBow2G0736 Salvia bowleyana HOM05D004868 ORTHO05D006030 1.9e-133 479.6 265 82.6
CSS0039857 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 2.5e-133 479.2 261 84.7
Prupe.6G337200 Prunus persica HOM05D004868 ORTHO05D006030 2.5e-133 479.2 258 85.7
PGR004G1913 Punica granatum HOM05D004868 ORTHO05D006030 2.5e-133 479.2 261 84.7
CSS0028974 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 9.6e-133 477.2 261 84.7
HanXRQChr05g0161431 Helianthus annuus HOM05D004868 ORTHO05D006030 9.6e-133 477.2 265 84.2
ECA246G2619 Erigeron canadensis HOM05D004868 ORTHO05D006030 1.2e-132 476.9 261 83.9
MD04G1217100 Malus domestica HOM05D004868 ORTHO05D006030 2.1e-132 476.1 258 84.1
CSS0000773 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 3.6e-132 475.3 266 82.7
Hund07000 Selenicereus undatus HOM05D004868 ORTHO05D006030 3.6e-132 475.3 288 78.5
CiPaw.07G009000 Carya illinoinensis HOM05D004868 ORTHO05D006030 1.1e-131 473.8 263 83.7
Eucgr.H04401 Eucalyptus grandis HOM05D004868 ORTHO05D006030 1.1e-131 473.8 253 86.2
Glyma.03G028300 Glycine max HOM05D004868 ORTHO05D006030 1.1e-131 473.8 258 84.1
Lj3g0018370 Lotus japonicus HOM05D004868 ORTHO05D006030 1.1e-131 473.8 261 84.3
Glyma.01G139000 Glycine max HOM05D004868 ORTHO05D006030 1.4e-131 473.4 257 84.8
Oeu012475.1 Olea europaea HOM05D004868 ORTHO05D006030 1.4e-131 473.4 263 82.5
Lalb_Chr13g0291821 Lupinus albus HOM05D004868 ORTHO05D006030 1.8e-131 473.0 263 83.7
Sed0014615 Sechium edule HOM05D004868 ORTHO05D006030 1.8e-131 473.0 323 71.8
FAN02G0279 Fragaria x ananassa HOM05D004868 ORTHO05D006030 2.4e-131 472.6 265 81.5
Lalb_Chr12g0208121 Lupinus albus HOM05D004868 ORTHO05D006030 2.4e-131 472.6 259 84.6
Peaxi162Scf00225g00143 Petunia axillaris HOM05D004868 ORTHO05D006030 2.4e-131 472.6 257 85.6
Thecc.05G291500 Theobroma cacao HOM05D004868 ORTHO05D006030 2.4e-131 472.6 263 83.3
FAN09G4706 Fragaria x ananassa HOM05D004868 ORTHO05D006030 3.1e-131 472.2 269 81.4
MD12G1234100 Malus domestica HOM05D004868 ORTHO05D006030 3.1e-131 472.2 258 84.1
RcHm_v2.0_Chr3g0452511 Rosa chinensis HOM05D004868 ORTHO05D006030 3.1e-131 472.2 265 81.5
TAR636G1948 Trochodendron aralioides HOM05D004868 ORTHO05D006030 4.0e-131 471.9 264 82.2
CiPaw.08G177900 Carya illinoinensis HOM05D004868 ORTHO05D006030 5.2e-131 471.5 263 84.0
FAN05G2179 Fragaria x ananassa HOM05D004868 ORTHO05D006030 6.9e-131 471.1 265 81.1
FAN05G5662 Fragaria x ananassa HOM05D004868 ORTHO05D006030 6.9e-131 471.1 265 81.1
FAN14G3773 Fragaria x ananassa HOM05D004868 ORTHO05D006030 6.9e-131 471.1 265 81.1
Cc02_g31280 Coffea canephora HOM05D004868 ORTHO05D006030 2.6e-130 469.2 261 82.0
FvH4_6g03940 Fragaria vesca HOM05D004868 ORTHO05D006030 2.6e-130 469.2 265 81.1
Migut.B00327 Erythranthe guttata HOM05D004868 ORTHO05D006030 3.4e-130 468.8 263 84.0
A03p33990 Brassica napus HOM05D004868 ORTHO05D006030 1.3e-129 466.8 264 81.8
Lj9A672G84 Lonicera japonica HOM05D004868 ORTHO05D006030 1.3e-129 466.8 242 89.3
C03p41370 Brassica napus HOM05D004868 ORTHO05D006030 2.2e-129 466.1 264 81.4
HanXRQChr14g0447091 Helianthus annuus HOM05D004868 ORTHO05D006030 2.9e-129 465.7 265 82.3
Sp3g03920 Schrenkiella parvula HOM05D004868 ORTHO05D006030 3.8e-129 465.3 266 80.8
BolC3t16420H Brassica oleracea HOM05D004868 ORTHO05D006030 4.9e-129 464.9 264 81.1
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 6.4e-129 464.5 260 83.5
BraA03t12574Z Brassica rapa HOM05D004868 ORTHO05D006030 8.4e-129 464.2 264 81.4
SGA_v2.0_scaffold146G36132 Striga asiatica HOM05D004868 ORTHO05D006030 8.4e-129 464.2 270 79.6
BcaC01g04334 Brassica carinata HOM05D004868 ORTHO05D006030 1.1e-128 463.8 261 82.0
Thhalv10021106m.g Eutrema salsugineum HOM05D004868 ORTHO05D006030 1.9e-128 463.0 266 80.8
Aa31LG5G15350 Aethionema arabicum HOM05D004868 ORTHO05D006030 7.1e-128 461.1 266 80.5
MSTRG.13789 Avicennia marina HOM05D004868 ORTHO05D006030 7.1e-128 461.1 263 80.6
BcaNung04260 Brassica carinata HOM05D004868 ORTHO05D006030 9.3e-128 460.7 267 79.8
MELO3C010076.2 Cucumis melo HOM05D004868 ORTHO05D006030 2.1e-127 459.5 319 70.5
MSTRG.12666 Avicennia marina HOM05D004868 ORTHO05D006030 4.6e-127 458.4 258 82.6
Sp2g20350 Schrenkiella parvula HOM05D004868 ORTHO05D006030 4.6e-127 458.4 266 80.5
C07p40470 Brassica napus HOM05D004868 ORTHO05D006030 6.0e-127 458.0 267 79.4
BolC7t44582H Brassica oleracea HOM05D004868 ORTHO05D006030 6.0e-127 458.0 267 79.4
BraA06t26695Z Brassica rapa HOM05D004868 ORTHO05D006030 7.8e-127 457.6 269 79.2
ClCG03G010920 Citrullus lanatus HOM05D004868 ORTHO05D006030 1.0e-126 457.2 259 81.9
Thhalv10004543m.g Eutrema salsugineum HOM05D004868 ORTHO05D006030 1.0e-126 457.2 267 79.0
GSVIVG01021894001 Vitis vinifera HOM05D004868 ORTHO05D006030 2.3e-126 456.1 242 87.6
Carub.0003s0434 Capsella rubella HOM05D004868 ORTHO05D006030 3.0e-126 455.7 263 80.2
BcaB04g21374 Brassica carinata HOM05D004868 ORTHO05D006030 3.9e-126 455.3 266 78.9
Sed0017257 Sechium edule HOM05D004868 ORTHO05D006030 3.9e-126 455.3 263 81.0
Aqoxy5G00612 Aquilegia oxysepala HOM05D004868 ORTHO05D006030 6.6e-126 454.5 266 80.5
AL3G15480 Arabidopsis lyrata HOM05D004868 ORTHO05D006030 6.6e-126 454.5 266 78.6
CsaV3_1G044760 Cucumis sativus L. HOM05D004868 ORTHO05D006030 8.7e-126 454.1 259 81.5
AT3G05100 Arabidopsis thaliana HOM05D004868 ORTHO05D006030 1.1e-125 453.8 263 79.5
VMungo0331G1201 Vigna mungo HOM05D004868 ORTHO05D006030 1.1e-125 453.8 258 82.6
Aa31LG11G8840 Aethionema arabicum HOM05D004868 ORTHO05D006030 9.6e-125 450.7 266 78.2
PSO170G6220 Papaver somniferum HOM05D004868 ORTHO05D006030 1.3e-124 450.3 263 80.6
PSO210G5882 Papaver somniferum HOM05D004868 ORTHO05D006030 1.3e-124 450.3 263 80.6
A05p42480 Brassica napus HOM05D004868 ORTHO05D006030 4.8e-124 448.4 266 78.6
BraA05t23004Z Brassica rapa HOM05D004868 ORTHO05D006030 4.8e-124 448.4 266 78.6
CARHR185710 Cardamine hirsuta HOM05D004868 ORTHO05D006030 8.1e-124 447.6 264 78.8
Carub.0006s2543 Capsella rubella HOM05D004868 ORTHO05D006030 1.1e-123 447.2 264 79.2
BcaNung04261 Brassica carinata HOM05D004868 ORTHO05D006030 1.4e-123 446.8 267 77.9
C05p62140 Brassica napus HOM05D004868 ORTHO05D006030 1.8e-123 446.4 265 78.5
BolC5t34872H Brassica oleracea HOM05D004868 ORTHO05D006030 1.8e-123 446.4 265 78.5
AUR62000953 Chenopodium quinoa HOM05D004868 ORTHO05D006030 1.8e-123 446.4 233 89.3
MBI18_g14729_MAGBIO Magnolia biondii HOM05D004868 ORTHO05D006030 7.1e-120 434.5 268 76.1
ATR0618G246 Amborella trichopoda HOM05D004868 ORTHO05D006030 1.0e-118 430.6 263 77.2
Os07g0667400 Oryza sativa ssp. japonica HOM05D004868 ORTHO05D006030 1.1e-117 427.2 272 75.0
Zm00001eb110980 Zea mays HOM05D004868 ORTHO05D006030 1.1e-117 427.2 274 74.8
Psat7g231080 Pisum sativum HOM05D004868 ORTHO05D006030 9.6e-117 424.1 217 88.9
Sabra13G0033200 Salix brachista HOM05D004868 ORTHO05D006030 6.2e-116 421.4 247 82.2
Lj7C479T1 Lonicera japonica HOM05D004868 ORTHO05D006030 1.1e-115 420.6 221 86.9
unitig_8.g3689 Utricularia gibba HOM05D004868 ORTHO05D006030 6.9e-115 417.9 269 70.3
Nn4g26018 Nelumbo nucifera HOM05D004868 ORTHO05D006030 3.8e-113 412.1 219 86.3
Dinv02605 Davidia involucrata HOM05D004868 ORTHO05D006030 4.9e-113 411.8 244 79.5
vmacro05392 Vaccinium macrocarpon HOM05D004868 ORTHO05D006030 5.5e-112 408.3 228 82.9
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 9.3e-112 407.5 214 87.9
HPP92_016882 Vanilla planifolia HOM05D004868 ORTHO05D006030 3.1e-107 392.5 269 70.6
Dinv02602 Davidia involucrata HOM05D004868 ORTHO05D006030 1.5e-106 390.2 208 87.0
SEGI_16580 Sequoiadendron giganteum HOM05D004868 ORTHO05D006030 7.6e-106 387.9 264 72.3
HPP92_011336 Vanilla planifolia HOM05D004868 ORTHO05D006030 3.8e-105 385.6 268 69.0
SHI18309 Sapria himalayana HOM05D004868 ORTHO05D006030 6.3e-100 368.2 219 76.7
Oeu027042.1 Olea europaea HOM05D004868 ORTHO05D006030 4.2e-96 355.5 228 74.6
SMO203G0024 Selaginella moellendorffii HOM05D004868 ORTHO05D006030 2.7e-95 352.8 258 64.3
AagrBONN_evm.TU.Sc2ySwM_344.3690 Anthoceros agrestis HOM05D004868 ORTHO05D006030 1.8e-91 340.1 263 63.1
Pp3c9_1110 Physcomitrium patens HOM05D004868 ORTHO05D006030 6.5e-81 305.1 233 61.8
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 4.7e-79 298.9 151 88.7
Cpa.g.c47757 Carica papaya HOM05D004868 ORTHO05D006030 9.7e-77 291.2 152 87.5
TAR365G1069 Trochodendron aralioides HOM05D004868 ORTHO05D006030 2.4e-75 286.6 179 74.3
CDE08G0242 Ceratophyllum demersum HOM05D004868 ORTHO05D006030 1.4e-70 270.8 180 69.4
BcaC05g29994 Brassica carinata HOM05D004868 ORTHO05D006030 2.3e-70 270.0 218 63.8
Sc09g0003690 Simmondsia chinensis HOM05D004868 ORTHO05D006030 3.1e-67 259.6 147 80.3
Nn3g21303 Nelumbo nucifera HOM05D004868 ORTHO05D006030 1.5e-64 250.8 144 79.9
A06p37760 Brassica napus HOM05D004868 ORTHO05D006030 1.9e-64 250.4 144 78.5
CARHR079420 Cardamine hirsuta HOM05D004868 ORTHO05D006030 7.2e-64 248.4 143 79.0
CDE02G4194 Ceratophyllum demersum HOM05D001090 ORTHO05D002687 1.1e-56 224.6 126 80.2
HPP92_028573 Vanilla planifolia HOM05D004868 ORTHO05D006030 2.8e-52 209.9 147 68.0
BcaB04g19280 Brassica carinata HOM05D004868 ORTHO05D006030 2.1e-39 167.2 134 61.9
Lsat_1_v5_gn_5_121600 Lactuca sativa HOM05D004868 ORTHO05D027635 1.0e-17 95.1 84 57.1
BolC1t05715H Brassica oleracea HOM05D004868 ORTHO05D006030 2.9e-12 77.0 49 69.4
Lj7C479T9 Lonicera japonica HOM05D004868 ORTHO05D027635 8.4e-12 75.5 94 43.6
SHI18307 Sapria himalayana HOM05D004868 ORTHO05D027635 6.0e-10 69.3 46 67.4
BcaNung04262 Brassica carinata HOM05D004868 ORTHO05D027635 1.3e-09 68.2 49 61.2


User provided reference genes

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