Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022808 Daucus carota HOM05D006199 ORTHO05D006558 1.1e-198 696.4 357 100.0
Rhsim11G0191800 Rhododendron simsii HOM05D006199 ORTHO05D006558 1.4e-111 407.1 408 57.6
Lj5A179T83 Lonicera japonica HOM05D006199 ORTHO05D006558 6.7e-111 404.8 413 56.4
PGSC0003DMG400006190 Solanum tuberosum HOM05D006199 ORTHO05D006558 5.7e-110 401.7 368 61.4
Dinv41943 Davidia involucrata HOM05D006199 ORTHO05D006558 2.9e-106 389.4 317 64.7
Cfa005236 Carpinus fangiana HOM05D006199 ORTHO05D006558 8.5e-106 387.9 413 55.4
TWI75G1548 Tripterygium wilfordii HOM05D006199 ORTHO05D006558 4.2e-105 385.6 409 55.3
CAN.G588.74 Capsicum annuum HOM05D006199 ORTHO05D006558 7.2e-105 384.8 414 54.6
CANSAT25G2535 Cannabis sativa HOM05D006199 ORTHO05D006558 1.2e-104 384.0 414 54.8
Sopen01g053590 Solanum pennellii HOM05D006199 ORTHO05D006558 2.1e-104 383.3 413 54.0
CiPaw.05G081500 Carya illinoinensis HOM05D006199 ORTHO05D006558 2.7e-104 382.9 414 54.3
Nitab4.5_0005853g0010 Nicotiana tabacum HOM05D006199 ORTHO05D006558 3.6e-104 382.5 414 54.6
Solyc01g111550.3 Solanum lycopersicum HOM05D006199 ORTHO05D006558 1.0e-103 380.9 413 53.8
QL11p050170 Quercus lobata HOM05D006199 ORTHO05D006558 5.2e-103 378.6 419 54.4
GSVIVG01024030001 Vitis vinifera HOM05D006199 ORTHO05D006558 1.3e-101 374.0 312 64.7
Lsat_1_v5_gn_4_71580 Lactuca sativa HOM05D006199 ORTHO05D006558 4.8e-101 372.1 399 52.9
TAR628G1195 Trochodendron aralioides HOM05D006199 ORTHO05D006558 3.1e-100 369.4 412 53.9
Cc02_g16220 Coffea canephora HOM05D006199 ORTHO05D006558 9.1e-100 367.9 320 61.9
ClCG02G011890 Citrullus lanatus HOM05D006199 ORTHO05D006558 5.9e-99 365.2 413 52.8
ECA234G0878 Erigeron canadensis HOM05D006199 ORTHO05D006558 1.3e-98 364.0 399 54.1
Nitab4.5_0006645g0060 Nicotiana tabacum HOM05D006199 ORTHO05D006558 1.7e-98 363.6 439 51.5
Potri.009G134500 Populus trichocarpa HOM05D006199 ORTHO05D006558 2.9e-98 362.8 413 51.8
CsaV3_2G016060 Cucumis sativus L. HOM05D006199 ORTHO05D006558 3.8e-98 362.5 404 52.7
Sabra09G0104300 Salix brachista HOM05D006199 ORTHO05D006558 3.8e-98 362.5 413 52.1
Eucgr.I01413 Eucalyptus grandis HOM05D006199 ORTHO05D006558 8.5e-98 361.3 414 53.1
EL10Ac9g21386 Beta vulgaris HOM05D006199 ORTHO05D006558 1.1e-97 360.9 403 51.6
RcHm_v2.0_Chr6g0251921 Rosa chinensis HOM05D006199 ORTHO05D006558 1.1e-97 360.9 413 52.1
Thecc.02G060900 Theobroma cacao HOM05D006199 ORTHO05D006558 1.1e-97 360.9 342 59.1
Nn5g30772 Nelumbo nucifera HOM05D006199 ORTHO05D006558 1.5e-97 360.5 407 54.1
Peaxi162Scf00362g00651 Petunia axillaris HOM05D006199 ORTHO05D006558 2.5e-97 359.8 427 49.9
MD10G1095100 Malus domestica HOM05D006199 ORTHO05D006558 1.2e-96 357.5 410 52.0
Gorai.002G197400 Gossypium raimondii HOM05D006199 ORTHO05D006558 1.6e-96 357.1 315 58.7
Gohir.D01G159100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 6.1e-96 355.1 316 58.2
Sed0003263 Sechium edule HOM05D006199 ORTHO05D006558 1.0e-95 354.4 412 51.9
Phvul.009G119500 Phaseolus vulgaris HOM05D006199 ORTHO05D006558 1.4e-95 354.0 407 51.1
Migut.B00085 Erythranthe guttata HOM05D006199 ORTHO05D006558 1.8e-95 353.6 395 52.4
FvH4_2g01260 Fragaria vesca HOM05D006199 ORTHO05D006558 5.2e-95 352.1 413 50.8
Duzib132G0247 Durio zibethinus HOM05D006199 ORTHO05D006558 8.8e-95 351.3 315 59.7
MSTRG.19995 Avicennia marina HOM05D006199 ORTHO05D006558 1.2e-94 350.9 396 52.5
Ah.01g022950 Amaranthus hybridus HOM05D006199 ORTHO05D006558 7.5e-94 348.2 411 50.4
Gohir.A01G168100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 2.8e-93 346.3 378 51.3
HanXRQChr10g0300911 Helianthus annuus HOM05D006199 ORTHO05D006558 4.8e-93 345.5 399 51.6
Actinidia00620 Actinidia chinensis HOM05D006199 ORTHO05D006558 1.1e-92 344.4 400 53.5
FAN20G1063 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.4e-92 344.0 413 50.4
AUR62013038 Chenopodium quinoa HOM05D006199 ORTHO05D006558 5.4e-92 342.0 416 49.0
MELO3C020815.2 Cucumis melo HOM05D006199 ORTHO05D006558 5.4e-92 342.0 454 47.4
VMungo1309G0102 Vigna mungo HOM05D006199 ORTHO05D006558 9.1e-92 341.3 412 49.3
AL4G10110 Arabidopsis lyrata HOM05D006199 ORTHO05D006558 3.5e-91 339.3 311 57.2
PGR142G1980 Punica granatum HOM05D006199 ORTHO05D006558 7.7e-91 338.2 424 50.0
AT2G20980 Arabidopsis thaliana HOM05D006199 ORTHO05D006558 1.7e-90 337.0 398 49.0
THA.LOC104807811 Tarenaya hassleriana HOM05D006199 ORTHO05D006558 1.5e-89 334.0 380 50.3
Carub.0004s0005 Capsella rubella HOM05D006199 ORTHO05D006558 1.9e-89 333.6 347 53.3
Lj1g0009253 Lotus japonicus HOM05D006199 ORTHO05D006558 1.6e-88 330.5 423 49.4
Aqoxy6G02177 Aquilegia oxysepala HOM05D006199 ORTHO05D006558 6.1e-88 328.6 405 50.4
Aa31LG7G15660 Aethionema arabicum HOM05D006199 ORTHO05D006558 1.4e-87 327.4 312 56.4
Thhalv10000193m.g Eutrema salsugineum HOM05D006199 ORTHO05D006558 1.4e-87 327.4 360 50.6
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea HOM05D006199 ORTHO05D006558 1.8e-87 327.0 415 50.4
Hund00025 Selenicereus undatus HOM05D006199 ORTHO05D006558 1.8e-87 327.0 399 49.9
FAN27G0272 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.0e-87 326.2 392 50.3
SalBow1G2578 Salvia bowleyana HOM05D006199 ORTHO05D006558 5.2e-87 325.5 397 48.1
MBI08_g14630_MAGBIO Magnolia biondii HOM05D006199 ORTHO05D006558 8.8e-87 324.7 405 49.4
Manes.04G075600 Manihot esculenta HOM05D006199 ORTHO05D006558 8.8e-87 324.7 363 50.7
Sp4g00170 Schrenkiella parvula HOM05D006199 ORTHO05D006558 1.2e-86 324.3 395 48.1
Oeu050364.1 Olea europaea HOM05D006199 ORTHO05D006558 4.4e-86 322.4 251 66.9
Glyma.04G003800 Glycine max HOM05D006199 ORTHO05D006558 1.3e-85 320.9 417 48.0
PSO675G4200 Papaver somniferum HOM05D006199 ORTHO05D006558 1.3e-85 320.9 423 47.8
SHI05731 Sapria himalayana HOM05D006199 ORTHO05D006558 1.7e-85 320.5 345 52.8
Sc18g0006460 Simmondsia chinensis HOM05D006199 ORTHO05D006558 3.7e-85 319.3 268 60.1
FAN24G2717 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.1e-84 317.8 386 49.0
Medtr3g117880 Medicago truncatula HOM05D006199 ORTHO05D006558 9.2e-84 314.7 411 47.4
Ciclev10028644m.g Citrus clementina HOM05D006199 ORTHO05D006558 2.0e-83 313.5 412 48.3
Prupe.8G164900 Prunus persica HOM05D006199 ORTHO05D006558 5.9e-83 312.0 414 48.3
Haze_02147 Corylus avellana HOM05D006199 ORTHO05D006558 3.8e-82 309.3 476 44.5
BraA03t11952Z Brassica rapa HOM05D006199 ORTHO05D006558 1.9e-81 307.0 394 47.2
PSO541G4917 Papaver somniferum HOM05D006199 ORTHO05D006558 3.3e-81 306.2 425 46.1
A03p27410 Brassica napus HOM05D006199 ORTHO05D006558 9.5e-81 304.7 394 47.2
C03p33040 Brassica napus HOM05D006199 ORTHO05D006558 9.5e-81 304.7 394 46.4
BolC3t15631H Brassica oleracea HOM05D006199 ORTHO05D006558 2.1e-80 303.5 394 46.2
BcaC01g04861 Brassica carinata HOM05D006199 ORTHO05D006558 4.0e-79 299.3 364 47.8
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea HOM05D006199 ORTHO05D006558 8.9e-79 298.1 400 49.0
Ca_15302_v3 Cicer arietinum L. HOM05D006199 ORTHO05D006558 1.5e-78 297.4 366 48.6
TPR.G38477 Trifolium pratense HOM05D006199 ORTHO05D006558 2.0e-78 297.0 413 46.5
CARHR111860 Cardamine hirsuta HOM05D006199 ORTHO05D006558 2.2e-77 293.5 286 53.1
COL.COLO4_17328 Corchorus olitorius HOM05D006199 ORTHO05D006558 6.4e-77 292.0 356 50.0
ATR0078G008 Amborella trichopoda HOM05D006199 ORTHO05D006558 1.8e-76 290.4 411 45.5
Atru.chr5.3311 Acer truncatum HOM05D006199 ORTHO05D006558 3.2e-76 289.7 359 48.2
CiPaw.06G122500 Carya illinoinensis HOM05D006199 ORTHO05D006558 1.0e-74 284.6 315 54.0
AUR62010046 Chenopodium quinoa HOM05D006199 ORTHO05D006558 2.1e-72 276.9 359 48.5
vmacro02274 Vaccinium macrocarpon HOM05D006199 ORTHO05D006558 3.7e-69 266.2 334 48.5
HPP92_008341 Vanilla planifolia HOM05D006199 ORTHO05D006558 2.7e-67 260.0 405 44.2
Zm00001eb331950 Zea mays HOM05D006199 ORTHO05D006558 3.5e-67 259.6 315 46.3
Cpa.g.sc37.143 Carica papaya HOM05D006199 ORTHO05D006558 7.8e-67 258.5 243 55.6
BcaB07g29803 Brassica carinata HOM05D006199 ORTHO05D006558 1.1e-65 254.6 404 42.3
CSS0017687 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 6.2e-64 248.8 191 66.5
Os09g0539400 Oryza sativa ssp. japonica HOM05D006199 ORTHO05D006558 1.4e-63 247.7 410 40.0
Lalb_Chr23g0265011 Lupinus albus HOM05D006199 ORTHO05D006558 1.7e-61 240.7 335 46.6
Psat5g002720 Pisum sativum HOM05D006199 ORTHO05D006558 8.4e-53 211.8 416 38.9
FAN11G3400 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.3e-50 204.5 194 55.2
unitig_37.g12834 Utricularia gibba HOM05D006199 ORTHO05D006558 1.3e-50 204.5 308 44.2
AagrBONN_evm.TU.Sc2ySwM_362.2501 Anthoceros agrestis HOM05D006199 ORTHO05D006558 2.1e-43 180.6 322 34.8
Pp3c15_24300 Physcomitrium patens HOM05D006199 ORTHO05D006558 1.3e-42 177.9 242 41.3
Mapoly0068s0001 Marchantia polymorpha HOM05D006199 ORTHO05D006558 2.3e-42 177.2 241 40.7
FvH4_3g06660 Fragaria vesca HOM05D006199 ORTHO05D006558 1.5e-41 174.5 165 54.5
AUR62027127 Chenopodium quinoa HOM05D006199 ORTHO05D006558 3.4e-38 163.3 190 51.1
FAN12G0591 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.7e-37 161.0 167 55.7
FAN06G5031 Fragaria x ananassa HOM05D006199 ORTHO05D006558 7.1e-36 155.6 122 63.9
FvH4_1g02330 Fragaria vesca HOM05D006199 ORTHO05D006558 3.7e-32 143.3 108 63.0
FAN14G5753 Fragaria x ananassa HOM05D006199 ORTHO05D006558 5.3e-31 139.4 108 62.0
FvH4_4g14930 Fragaria vesca HOM05D006199 ORTHO05D006558 2.4e-28 130.6 119 55.5
FvH4_5g37420 Fragaria vesca HOM05D006199 ORTHO05D006558 8.2e-24 115.5 127 50.4
MCO03G518 Micromonas commoda HOM05D006199 ORTHO05D006558 1.0e-21 108.6 199 32.2
Actinidia20510 Actinidia chinensis HOM05D006199 ORTHO05D006558 1.9e-20 104.4 98 58.2
FAN24G0607 Fragaria x ananassa HOM05D006199 ORTHO05D006558 5.5e-20 102.8 118 50.0
FvH4_2g23470 Fragaria vesca HOM05D006199 ORTHO05D006558 6.0e-19 99.4 71 64.8
CSS0031508 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 7.9e-19 99.0 173 41.6
FAN06G2201 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.0e-18 97.1 188 41.5
FvH4_7g17270 Fragaria vesca HOM05D006199 ORTHO05D006558 5.1e-18 96.3 81 59.3
BcaB01g02961 Brassica carinata HOM05D006199 ORTHO05D006558 1.4e-15 88.2 123 44.7
FAN14G4166 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.4e-15 88.2 61 67.2
CDE02G3657 Ceratophyllum demersum HOM05D006199 ORTHO05D006558 6.5e-13 79.3 97 52.6
RcHm_v2.0_Chr5g0048301 Rosa chinensis HOM05D006199 ORTHO05D006558 1.9e-12 77.8 101 42.6
HanXRQChr15g0479941 Helianthus annuus HOM05D006199 ORTHO05D006558 3.9e-10 70.1 85 44.7
CBR_g870 Chara braunii HOM05D006199 ORTHO05D006558 8.8e-10 68.9 202 28.2
SGA_v2.0_scaffold58G20372 Striga asiatica HOM05D006199 ORTHO05D006558 1.9e-09 67.8 154 35.7
FvH4_4g05800 Fragaria vesca HOM05D006199 ORTHO05D006558 7.7e-06 55.8 54 51.9


User provided reference genes

Program Settings