Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 7.2e-134 480.7 265 100.0
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 7.3e-46 188.3 266 50.4
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 1.6e-45 187.2 268 49.3
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 2.4e-44 183.3 142 69.0
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 4.0e-44 182.6 260 51.2
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 2.6e-43 179.9 219 54.3
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 7.6e-43 178.3 146 69.2
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 2.9e-42 176.4 251 49.0
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 1.9e-41 173.7 268 49.6
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 9.3e-41 171.4 243 51.9
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 2.1e-40 170.2 259 49.0
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 3.5e-40 169.5 265 46.4
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 2.3e-39 166.8 154 61.0
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 5.1e-39 165.6 273 45.4
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 6.7e-39 165.2 267 48.7
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 8.7e-39 164.9 242 49.6
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.5e-38 164.1 183 55.7
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 1.9e-38 163.7 273 46.9
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 2.5e-38 163.3 161 61.5
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 2.5e-38 163.3 132 68.2
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 5.6e-38 162.2 178 58.4
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 1.6e-37 160.6 236 51.3
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.6e-37 160.6 239 48.1
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 2.1e-37 160.2 147 62.6
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 2.1e-37 160.2 183 54.6
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.1e-37 160.2 183 54.6
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 2.1e-37 160.2 228 50.9
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 2.8e-37 159.8 267 46.4
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 2.8e-37 159.8 269 48.0
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 4.8e-37 159.1 115 72.2
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 8.1e-37 158.3 259 46.3
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 1.1e-36 157.9 125 68.0
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 1.1e-36 157.9 237 48.9
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.4e-36 157.5 260 46.2
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.8e-36 157.1 183 54.1
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 2.4e-36 156.8 240 47.9
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 3.1e-36 156.4 174 54.0
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 4.0e-36 156.0 226 48.2
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 4.0e-36 156.0 147 64.6
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 5.3e-36 155.6 233 50.6
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 1.5e-35 154.1 244 46.7
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 2.0e-35 153.7 162 55.6
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 2.0e-35 153.7 269 44.2
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 3.4e-35 152.9 139 59.7
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 3.4e-35 152.9 260 44.2
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 3.4e-35 152.9 145 63.4
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 3.4e-35 152.9 216 48.6
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 4.5e-35 152.5 278 42.4
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 4.5e-35 152.5 240 46.2
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 5.8e-35 152.1 165 56.4
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.0e-34 151.4 250 45.2
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 1.3e-34 151.0 264 42.4
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 1.7e-34 150.6 146 56.8
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.7e-34 150.6 238 44.5
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 1.7e-34 150.6 240 46.2
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.2e-34 150.2 233 45.1
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 2.9e-34 149.8 144 59.0
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 2.9e-34 149.8 246 45.9
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 2.9e-34 149.8 237 44.3
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 3.8e-34 149.4 150 57.3
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 3.8e-34 149.4 132 65.9
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 4.9e-34 149.1 148 58.1
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 4.9e-34 149.1 256 44.9
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 2.5e-33 146.7 225 46.7
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 4.2e-33 146.0 189 51.9
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 4.2e-33 146.0 262 44.7
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 4.2e-33 146.0 238 44.1
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 4.2e-33 146.0 172 52.9
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 9.3e-33 144.8 120 66.7
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 9.3e-33 144.8 145 60.7
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 9.3e-33 144.8 145 60.7
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 1.2e-32 144.4 148 61.5
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 1.6e-32 144.1 145 60.7
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 1.6e-32 144.1 256 42.6
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 2.1e-32 143.7 238 43.3
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 2.7e-32 143.3 145 57.9
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 4.6e-32 142.5 143 61.5
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 4.6e-32 142.5 289 42.9
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 7.9e-32 141.7 145 60.0
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 7.9e-32 141.7 145 60.0
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 7.9e-32 141.7 183 50.3
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 7.9e-32 141.7 259 42.9
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 1.0e-31 141.4 150 60.7
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 1.0e-31 141.4 248 43.5
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 1.0e-31 141.4 127 64.6
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.3e-31 141.0 272 46.7
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 1.8e-31 140.6 207 47.3
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.9e-30 137.1 288 42.4
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 7.4e-30 135.2 236 42.4
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.8e-28 130.6 220 43.2
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 6.9e-28 128.6 235 44.7
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 2.6e-27 126.7 148 52.7
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.0e-26 124.8 219 42.0
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.3e-26 124.4 220 44.1
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 5.0e-26 122.5 276 41.3
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.1e-25 121.3 98 66.3
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 3.2e-25 119.8 209 45.9
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 3.2e-25 119.8 209 45.9
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 3.2e-25 119.8 112 60.7
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 9.3e-25 118.2 216 41.7
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 9.3e-25 118.2 216 41.7
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 1.6e-24 117.5 214 42.1
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 3.7e-21 106.3 215 44.7
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 4.8e-21 105.9 145 46.2
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.2e-19 101.3 151 42.4
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 8.5e-18 95.1 67 77.6
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-17 94.4 81 61.7
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 1.4e-17 94.4 80 62.5
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 5.5e-17 92.4 130 41.5
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 9.4e-17 91.7 79 62.0
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 2.1e-16 90.5 96 46.9
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 4.6e-16 89.4 110 48.2
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-15 87.8 63 69.8
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-15 87.8 63 69.8
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.0e-15 86.7 59 72.9
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 7.4e-14 82.0 58 74.1
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 2.2e-13 80.5 110 51.8
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 1.4e-12 77.8 54 72.2
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 2.9e-10 70.1 51 70.6
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 3.8e-10 69.7 50 72.0
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 1.0e-07 61.6 83 41.0


User provided reference genes

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