Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 9.0e-133 477.2 275 100.0
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 4.4e-63 245.7 295 53.2
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 2.5e-58 229.9 258 49.6
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 5.6e-58 228.8 294 49.0
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 4.7e-57 225.7 282 44.7
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 8.9e-56 221.5 276 44.6
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 2.0e-55 220.3 264 54.2
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 2.9e-54 216.5 263 46.0
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 6.4e-54 215.3 283 48.4
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 1.1e-53 214.5 263 45.6
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 4.1e-53 212.6 283 48.1
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 5.4e-53 212.2 267 53.2
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 1.2e-52 211.1 279 43.0
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 1.2e-52 211.1 252 54.4
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 3.5e-52 209.5 257 42.8
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 6.0e-52 208.8 268 50.4
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 1.0e-51 208.0 266 48.9
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 1.7e-51 207.2 252 51.2
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 1.1e-50 204.5 290 49.7
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 1.9e-50 203.8 240 45.8
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 2.5e-50 203.4 291 49.8
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 3.3e-50 203.0 288 46.9
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.2e-49 201.1 287 43.2
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 8.1e-49 198.4 188 48.9
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 2.4e-48 196.8 273 44.3
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 2.4e-48 196.8 294 46.9
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 3.1e-48 196.4 293 39.9
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 5.2e-48 195.7 283 45.9
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 6.8e-48 195.3 287 51.2
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 1.2e-47 194.5 292 40.8
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 2.6e-47 193.4 273 41.8
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 3.4e-47 193.0 264 39.0
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 4.9e-46 189.1 254 40.6
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 8.4e-46 188.3 238 44.1
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 5.4e-45 185.7 273 45.4
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 1.2e-44 184.5 250 42.0
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 3.5e-44 183.0 269 44.2
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 8.7e-43 178.3 276 40.9
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 8.7e-43 178.3 264 39.8
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 1.1e-42 177.9 274 41.6
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 1.1e-42 177.9 258 38.4
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 2.5e-42 176.8 245 42.0
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 3.3e-42 176.4 317 34.7
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 4.3e-42 176.0 283 38.2
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 1.6e-41 174.1 244 41.0
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 2.1e-41 173.7 287 49.5
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 2.1e-41 173.7 257 39.7
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 2.1e-41 173.7 284 50.4
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 2.8e-41 173.3 278 38.8
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 2.8e-41 173.3 290 42.1
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.4e-40 171.0 270 37.8
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 1.4e-40 171.0 308 37.7
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 1.8e-40 170.6 268 47.4
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 2.4e-40 170.2 252 50.4
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.0e-39 167.2 254 49.6
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 3.4e-39 166.4 254 49.6
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 4.4e-39 166.0 258 50.4
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 4.4e-39 166.0 258 50.4
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 5.8e-39 165.6 282 50.4
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 7.6e-39 165.2 234 44.4
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 9.9e-39 164.9 285 44.6
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 9.9e-39 164.9 251 44.6
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 9.9e-39 164.9 251 44.6
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 1.3e-38 164.5 272 38.6
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 2.9e-38 163.3 256 45.3
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 8.4e-38 161.8 284 38.7
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 1.9e-37 160.6 183 42.6
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.4e-37 160.2 294 48.3
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 3.2e-37 159.8 246 50.0
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 3.2e-37 159.8 187 44.4
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 7.1e-37 158.7 286 42.0
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 6.0e-36 155.6 270 48.5
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 1.7e-35 154.1 244 49.6
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 1.7e-35 154.1 286 33.6
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 5.1e-35 152.5 250 48.4
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 6.6e-35 152.1 179 42.5
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 1.1e-34 151.4 256 39.1
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 1.9e-34 150.6 191 41.4
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 2.5e-34 150.2 177 44.6
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 3.3e-34 149.8 240 43.8
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 2.1e-33 147.1 268 47.0
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 2.8e-33 146.7 306 33.7
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 3.6e-33 146.4 162 50.0
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 1.2e-31 141.4 225 39.1
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.2e-31 141.4 151 46.4
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 4.5e-31 139.4 299 32.8
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 2.9e-30 136.7 152 50.0
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 3.0e-27 126.7 330 28.2
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.6e-26 122.5 159 61.6
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.8e-24 117.5 316 27.8
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 7.6e-23 112.1 108 47.2
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 7.6e-23 112.1 294 31.3
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 2.1e-20 104.0 182 34.6
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 4.6e-12 76.3 189 30.2
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 7.9e-12 75.5 272 26.5
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 1.3e-06 58.2 111 49.5


User provided reference genes

Program Settings