Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022691 Daucus carota HOM05D006176 ORTHO05D007346 5.3e-57 224.2 117 100.0
Haze_16045 Corylus avellana HOM05D006176 ORTHO05D007346 1.2e-21 106.7 97 57.7
Actinidia26022 Actinidia chinensis HOM05D006176 ORTHO05D007346 8.0e-21 104.0 89 53.9
Cfa003523 Carpinus fangiana HOM05D006176 ORTHO05D007346 1.1e-20 103.6 97 56.7
Nitab4.5_0000255g0320 Nicotiana tabacum HOM05D006176 ORTHO05D007346 1.1e-20 103.6 89 55.1
Nitab4.5_0010678g0020 Nicotiana tabacum HOM05D006176 ORTHO05D007346 1.4e-20 103.2 119 47.9
Migut.I01087 Erythranthe guttata HOM05D006176 ORTHO05D007346 1.2e-19 100.1 93 53.8
Thecc.06G122200 Theobroma cacao HOM05D006176 ORTHO05D007346 1.2e-19 100.1 100 51.0
Sopen06g022380 Solanum pennellii HOM05D006176 ORTHO05D007346 1.5e-19 99.8 117 46.2
Glyma.07G040000 Glycine max HOM05D006176 ORTHO05D007346 2.0e-19 99.4 100 54.0
Lj3g0022886 Lotus japonicus HOM05D006176 ORTHO05D007346 2.0e-19 99.4 94 55.3
Atru.chr1.4004 Acer truncatum HOM05D006176 ORTHO05D007346 2.6e-19 99.0 91 52.7
Atru.chr1.4021 Acer truncatum HOM05D006176 ORTHO05D007346 2.6e-19 99.0 100 51.0
COL.COLO4_30741 Corchorus olitorius HOM05D006176 ORTHO05D007346 2.6e-19 99.0 98 52.0
Lsat_1_v5_gn_4_94161 Lactuca sativa HOM05D006176 ORTHO05D007346 2.6e-19 99.0 102 53.9
Manes.04G145900 Manihot esculenta HOM05D006176 ORTHO05D007346 3.4e-19 98.6 99 51.5
vmacro22033 Vaccinium macrocarpon HOM05D006176 ORTHO05D007346 3.4e-19 98.6 93 54.8
Dinv37860 Davidia involucrata HOM05D006176 ORTHO05D007346 5.8e-19 97.8 86 57.0
Duzib192G0929 Durio zibethinus HOM05D006176 ORTHO05D007346 7.5e-19 97.4 113 46.0
Glyma.16G008800 Glycine max HOM05D006176 ORTHO05D007346 7.5e-19 97.4 100 53.0
Dinv20423 Davidia involucrata HOM05D006176 ORTHO05D007346 9.8e-19 97.1 95 52.6
CiPaw.01G217500 Carya illinoinensis HOM05D006176 ORTHO05D007346 1.3e-18 96.7 95 51.6
Gohir.A05G139800 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.7e-18 96.3 118 45.8
Solyc06g062930.1 Solanum lycopersicum HOM05D006176 ORTHO05D007346 2.9e-18 95.5 117 43.6
FAN09G3283 Fragaria x ananassa HOM05D006176 ORTHO05D007346 6.4e-18 94.4 99 52.5
Gohir.D05G142000 Gossypium hirsutum HOM05D006176 ORTHO05D007346 6.4e-18 94.4 118 44.9
Gorai.009G146100 Gossypium raimondii HOM05D006176 ORTHO05D007346 6.4e-18 94.4 118 44.9
FvH4_6g34980 Fragaria vesca HOM05D006176 ORTHO05D007346 8.3e-18 94.0 96 53.1
FAN05G0172 Fragaria x ananassa HOM05D006176 ORTHO05D007346 8.3e-18 94.0 96 53.1
FAN14G1476 Fragaria x ananassa HOM05D006176 ORTHO05D007346 8.3e-18 94.0 96 53.1
Ah.08g216920 Amaranthus hybridus HOM05D006176 ORTHO05D007346 1.1e-17 93.6 117 47.9
Gohir.A10G054700 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.1e-17 93.6 99 48.5
Gohir.D10G056700 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.1e-17 93.6 99 48.5
SGA_v2.0_scaffold122G33347 Striga asiatica HOM05D006176 ORTHO05D007346 1.9e-17 92.8 92 48.9
Ca_23393_v3 Cicer arietinum L. HOM05D006176 ORTHO05D007346 2.4e-17 92.4 99 49.5
Oeu000400.1 Olea europaea HOM05D006176 ORTHO05D007346 2.4e-17 92.4 111 49.5
PGSC0003DMG400004890 Solanum tuberosum HOM05D006176 ORTHO05D007346 2.4e-17 92.4 91 49.5
Oeu043644.1 Olea europaea HOM05D006176 ORTHO05D007346 3.2e-17 92.0 91 50.5
Potri.001G167600 Populus trichocarpa HOM05D006176 ORTHO05D007346 3.2e-17 92.0 111 45.9
Gorai.011G060500 Gossypium raimondii HOM05D006176 ORTHO05D007346 5.4e-17 91.3 99 47.5
Phvul.010G128700 Phaseolus vulgaris HOM05D006176 ORTHO05D007346 9.2e-17 90.5 100 47.0
TPR.G16753 Trifolium pratense HOM05D006176 ORTHO05D007346 9.2e-17 90.5 99 47.5
Nn8g38624 Nelumbo nucifera HOM05D006176 ORTHO05D007346 1.6e-16 89.7 99 46.5
RcHm_v2.0_Chr2g0146001 Rosa chinensis HOM05D006176 ORTHO05D007346 1.6e-16 89.7 99 51.5
Medtr8g021025 Medicago truncatula HOM05D006176 ORTHO05D007346 2.1e-16 89.4 109 44.0
TWI75G0921 Tripterygium wilfordii HOM05D006176 ORTHO05D007346 2.7e-16 89.0 92 51.1
EL10Ac7g16423 Beta vulgaris HOM05D006176 ORTHO05D007346 3.5e-16 88.6 108 47.2
Potri.003G067200 Populus trichocarpa HOM05D006176 ORTHO05D007346 3.5e-16 88.6 109 45.0
Lalb_Chr04g0261121 Lupinus albus HOM05D006176 ORTHO05D007346 6.0e-16 87.8 101 48.5
Rhsim12G0210400 Rhododendron simsii HOM05D006176 ORTHO05D007346 7.8e-16 87.4 88 50.0
Rhsim12G0210800 Rhododendron simsii HOM05D006176 ORTHO05D007346 1.0e-15 87.0 113 45.1
CANSAT56G3952 Cannabis sativa HOM05D006176 ORTHO05D007346 5.1e-15 84.7 98 46.9
QL05p004031 Quercus lobata HOM05D006176 ORTHO05D007346 1.1e-14 83.6 120 43.3
Prupe.3G039100 Prunus persica HOM05D006176 ORTHO05D007346 1.5e-14 83.2 93 48.4
PGR102G2654 Punica granatum HOM05D006176 ORTHO05D007346 1.5e-14 83.2 90 48.9
TAR624G0214 Trochodendron aralioides HOM05D006176 ORTHO05D007346 3.3e-14 82.0 87 52.9
Sc12g0010640 Simmondsia chinensis HOM05D006176 ORTHO05D007346 5.6e-14 81.3 111 38.7
Migut.D00934 Erythranthe guttata HOM05D006176 ORTHO05D007346 9.5e-14 80.5 90 48.9
Aqoxy2G03952 Aquilegia oxysepala HOM05D006176 ORTHO05D007346 1.2e-13 80.1 109 38.5
MBI19_g09833_MAGBIO Magnolia biondii HOM05D006176 ORTHO05D007346 2.1e-13 79.3 92 43.5
MD17G1166900 Malus domestica HOM05D006176 ORTHO05D007346 4.7e-13 78.2 93 47.3
Peaxi162Scf00038g02015 Petunia axillaris HOM05D006176 ORTHO05D007346 4.7e-13 78.2 113 41.6
Cpa.g.c40357 Carica papaya HOM05D006176 ORTHO05D007346 1.1e-12 77.0 111 40.5
MD09G1180800 Malus domestica HOM05D006176 ORTHO05D007346 1.8e-12 76.3 93 47.3
SGA_v2.0_scaffold4G02067 Striga asiatica HOM05D006176 ORTHO05D007346 1.8e-12 76.3 86 46.5
MBI13_g35417_MAGBIO Magnolia biondii HOM05D006176 ORTHO05D007346 4.0e-12 75.1 112 33.9
CsaV3_3G030710 Cucumis sativus L. HOM05D006176 ORTHO05D007346 8.9e-12 73.9 101 41.6
Nitab4.5_0000189g0110 Nicotiana tabacum HOM05D006176 ORTHO05D007346 8.9e-12 73.9 96 45.8
MELO3C022667.2 Cucumis melo HOM05D006176 ORTHO05D007346 1.2e-11 73.6 98 41.8
Lsat_1_v5_gn_5_136361 Lactuca sativa HOM05D006176 ORTHO05D007346 2.0e-11 72.8 98 46.9
ECA234G1437 Erigeron canadensis HOM05D006176 ORTHO05D007346 2.6e-11 72.4 110 45.5
Sed0000884 Sechium edule HOM05D006176 ORTHO05D007346 2.6e-11 72.4 98 40.8
SalBow6G3428 Salvia bowleyana HOM05D006176 ORTHO05D007346 3.4e-11 72.0 49 59.2
ClCG07G014560 Citrullus lanatus HOM05D006176 ORTHO05D007346 4.4e-11 71.6 90 41.1
Sopen03g041090 Solanum pennellii HOM05D006176 ORTHO05D007346 4.4e-11 71.6 108 38.9
PSO063G0286 Papaver somniferum HOM05D006176 ORTHO05D007346 5.8e-11 71.2 88 44.3
Ciclev10027265m.g Citrus clementina HOM05D006176 ORTHO05D007346 1.3e-10 70.1 73 50.7
HanXRQChr12g0360401 Helianthus annuus HOM05D006176 ORTHO05D007346 2.2e-10 69.3 67 47.8
Aa31LG10G1290 Aethionema arabicum HOM05D006176 ORTHO05D007346 2.9e-10 68.9 91 49.5
Carub.0001s4336 Capsella rubella HOM05D006176 ORTHO05D007346 2.9e-10 68.9 108 44.4
PSO421G0391 Papaver somniferum HOM05D006176 ORTHO05D007346 3.7e-10 68.6 93 43.0
AL1G62840 Arabidopsis lyrata HOM05D006176 ORTHO05D007346 6.4e-10 67.8 107 40.2
MSTRG.10943 Avicennia marina HOM05D006176 ORTHO05D007346 6.4e-10 67.8 83 47.0
AT1G54120 Arabidopsis thaliana HOM05D006176 ORTHO05D007346 1.1e-09 67.0 100 42.0
Sabra03G0039100 Salix brachista HOM05D006176 ORTHO05D007346 1.1e-09 67.0 105 41.9
PGSC0003DMG400022907 Solanum tuberosum HOM05D006176 ORTHO05D007346 1.4e-09 66.6 108 36.1
CARHR044470 Cardamine hirsuta HOM05D006176 ORTHO05D007346 1.9e-09 66.2 99 43.4
Thhalv10011868m.g Eutrema salsugineum HOM05D006176 ORTHO05D007346 1.6e-08 63.2 99 40.4
Psat4g168640 Pisum sativum HOM05D006176 ORTHO05D007346 2.7e-08 62.4 63 44.4
PGSC0003DMG400004373 Solanum tuberosum HOM05D006176 ORTHO05D007346 4.6e-08 61.6 82 39.0
Sp1g40570 Schrenkiella parvula HOM05D006176 ORTHO05D007346 6.0e-08 61.2 99 40.4
Sed0005659 Sechium edule HOM05D006176 ORTHO05D007346 7.8e-08 60.8 92 37.0
BcaB04g17025 Brassica carinata HOM05D006176 ORTHO05D007346 2.3e-07 59.3 99 38.4
CDE07G1640 Ceratophyllum demersum HOM05D006176 ORTHO05D007346 2.3e-07 59.3 82 34.1
BcaC08g43592 Brassica carinata HOM05D006176 ORTHO05D007346 5.1e-07 58.2 96 39.6
C06p09900 Brassica napus HOM05D006176 ORTHO05D007346 5.1e-07 58.2 96 39.6
BolC6t36062H Brassica oleracea HOM05D006176 ORTHO05D007346 5.1e-07 58.2 96 39.6
Lalb_Chr14g0361931 Lupinus albus HOM05D006176 ORTHO05D007346 5.1e-07 58.2 97 36.1
Nitab4.5_0005192g0040 Nicotiana tabacum HOM05D006176 ORTHO05D007346 6.6e-07 57.8 67 47.8
BcaB07g33263 Brassica carinata HOM05D006176 ORTHO05D007346 8.6e-07 57.4 96 39.6
BraA06t23268Z Brassica rapa HOM05D006176 ORTHO05D007346 8.6e-07 57.4 96 39.6
A06p00540 Brassica napus HOM05D006176 ORTHO05D007346 1.1e-06 57.0 96 39.6
Solyc03g122320.1 Solanum lycopersicum HOM05D021761 ORTHO05D037655 1.1e-06 57.0 105 37.1
THA.LOC104810370 Tarenaya hassleriana HOM05D006176 ORTHO05D007346 1.1e-06 57.0 88 36.4
A08p01210 Brassica napus HOM05D006176 ORTHO05D007346 1.5e-06 56.6 99 36.4
BraA08t32172Z Brassica rapa HOM05D006176 ORTHO05D007346 1.5e-06 56.6 99 36.4
MSTRG.10944 Avicennia marina HOM05D006176 ORTHO05D007346 1.9e-06 56.2 84 42.9
Sopen03g041080 Solanum pennellii HOM05D021761 ORTHO05D037655 1.9e-06 56.2 105 37.1
BcaC01g01436 Brassica carinata HOM05D006176 ORTHO05D007346 5.6e-06 54.7 99 36.4
C03p92010 Brassica napus HOM05D006176 ORTHO05D007346 5.6e-06 54.7 99 36.4
BolC3t21519H Brassica oleracea HOM05D006176 ORTHO05D007346 5.6e-06 54.7 99 36.4
PGSC0003DMG400016086 Solanum tuberosum HOM05D021761 ORTHO05D007346 5.6e-06 54.7 96 37.5
PGSC0003DMG400016088 Solanum tuberosum HOM05D021761 ORTHO05D007346 7.3e-06 54.3 92 35.9
C06p15630 Brassica napus HOM05D006176 ORTHO05D007346 9.5e-06 53.9 97 35.1


User provided reference genes

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