Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022606 Daucus carota HOM05D005871 ORTHO05D003654 1.2e-158 563.1 294 100.0
Potri.001G366500 Populus trichocarpa HOM05D005871 ORTHO05D003654 1.5e-15 87.8 269 33.8
Thecc.07G015800 Theobroma cacao HOM05D005871 ORTHO05D003654 1.7e-14 84.3 280 35.7
Sabra16G0239800 Salix brachista HOM05D005871 ORTHO05D003654 8.2e-14 82.0 267 34.8
COL.COLO4_09813 Corchorus olitorius HOM05D005871 ORTHO05D003654 2.6e-12 77.0 270 33.0
Lj6g0021132 Lotus japonicus HOM05D005871 ORTHO05D003654 4.5e-12 76.3 268 34.7
TWI39G0465 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 4.5e-12 76.3 273 33.7
VMungo0647G1579 Vigna mungo HOM05D005871 ORTHO05D003654 7.7e-12 75.5 267 33.3
Phvul.006G056300 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 1.0e-11 75.1 284 34.2
QL08p004709 Quercus lobata HOM05D005871 ORTHO05D003654 1.0e-11 75.1 266 31.2
Eucgr.F02056 Eucalyptus grandis HOM05D005871 ORTHO05D003654 1.7e-11 74.3 276 34.1
TWI38G0819 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 1.7e-11 74.3 271 32.1
CiPaw.12G137100 Carya illinoinensis HOM05D005871 ORTHO05D003654 2.2e-11 73.9 276 33.3
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 3.8e-11 73.2 270 32.2
Gohir.A04G006400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 3.8e-11 73.2 262 32.4
Sp3g11300 Schrenkiella parvula HOM05D010616 ORTHO05D003654 3.8e-11 73.2 245 32.2
Manes.15G061300 Manihot esculenta HOM05D005871 ORTHO05D003654 5.0e-11 72.8 233 31.8
Duzib170G1062 Durio zibethinus HOM05D005871 ORTHO05D003654 6.5e-11 72.4 261 29.9
SalBow8G3140 Salvia bowleyana HOM05D005871 ORTHO05D003654 8.5e-11 72.0 260 30.4
Glyma.18G078200 Glycine max HOM05D005871 ORTHO05D003654 1.9e-10 70.9 282 33.0
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 4.2e-10 69.7 275 34.2
Gorai.004G033400 Gossypium raimondii HOM05D005871 ORTHO05D003654 5.5e-10 69.3 259 31.7
Cpa.g.sc12.163 Carica papaya HOM05D005871 ORTHO05D003654 7.2e-10 68.9 283 33.6
Lalb_Chr18g0057151 Lupinus albus HOM05D005871 ORTHO05D003654 7.2e-10 68.9 278 28.4
PGR083G2866 Punica granatum HOM05D005871 ORTHO05D003654 9.4e-10 68.6 289 30.1
Gorai.009G449400 Gossypium raimondii HOM05D005871 ORTHO05D003654 1.6e-09 67.8 261 29.9
Gohir.D05G383000 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.1e-09 67.4 267 30.0
Gohir.D05G383100 Gossypium hirsutum HOM05D005871 ORTHO05D003654 2.1e-09 67.4 260 29.6
Gorai.009G449600 Gossypium raimondii HOM05D005871 ORTHO05D003654 2.1e-09 67.4 260 30.4
BcaB06g25485 Brassica carinata HOM05D010616 ORTHO05D003654 3.6e-09 66.6 241 30.3
MD00G1057200 Malus domestica HOM05D005871 ORTHO05D003654 3.6e-09 66.6 271 30.6
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 3.6e-09 66.6 306 32.4
Phvul.006G140600 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 3.6e-09 66.6 263 30.0
Phvul.008G278200 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 3.6e-09 66.6 276 31.5
Glyma.08G328600 Glycine max HOM05D005871 ORTHO05D003654 4.7e-09 66.2 277 31.8
Lalb_Chr04g0247911 Lupinus albus HOM05D005871 ORTHO05D003654 4.7e-09 66.2 280 33.6
Medtr2g026565 Medicago truncatula HOM05D005871 ORTHO05D003654 4.7e-09 66.2 252 30.2
Hma1.2p1_0657F.1_g196840 Hydrangea macrophylla HOM05D005871 ORTHO05D003654 6.1e-09 65.9 274 31.4
Lj6g0021470 Lotus japonicus HOM05D005871 ORTHO05D003654 6.1e-09 65.9 266 29.3
TPR.G10004 Trifolium pratense HOM05D005871 ORTHO05D003654 8.0e-09 65.5 249 30.9
VMungo0540G0718 Vigna mungo HOM05D005871 ORTHO05D003654 8.0e-09 65.5 266 29.3
Gohir.D08G035400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.0e-08 65.1 259 31.3
Glyma.14G014200 Glycine max HOM05D005871 ORTHO05D003654 1.4e-08 64.7 285 32.6
Psat1g173400 Pisum sativum HOM05D005871 ORTHO05D003654 1.8e-08 64.3 262 29.8
Prupe.4G241600 Prunus persica HOM05D005871 ORTHO05D003654 1.8e-08 64.3 270 30.7
SalBow7G0966 Salvia bowleyana HOM05D005871 ORTHO05D003654 1.8e-08 64.3 107 42.1
Gohir.D05G382900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 4.0e-08 63.2 255 31.0
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 4.0e-08 63.2 261 30.7
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 6.7e-08 62.4 258 28.3
Nitab4.5_0001701g0160 Nicotiana tabacum HOM05D016037 ORTHO05D003654 6.7e-08 62.4 88 44.3
Manes.03G140300 Manihot esculenta HOM05D005871 ORTHO05D003654 1.5e-07 61.2 286 32.5
Manes.03G140301 Manihot esculenta HOM05D005871 ORTHO05D003654 2.0e-07 60.8 282 31.2
TPR.G8596 Trifolium pratense HOM05D005871 ORTHO05D003654 2.6e-07 60.5 280 30.7
Gohir.A08G024900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 3.3e-07 60.1 259 30.5
Prupe.3G198500 Prunus persica HOM05D008806 ORTHO05D003654 3.3e-07 60.1 71 53.5
Migut.M01661 Erythranthe guttata HOM05D018445 ORTHO05D021546 4.4e-07 59.7 274 31.0
Glyma.02G299500 Glycine max HOM05D005871 ORTHO05D003654 4.4e-07 59.7 267 32.6
VMungo0540G2170 Vigna mungo HOM05D005871 ORTHO05D003654 5.7e-07 59.3 290 31.4
CiPaw.11G202600 Carya illinoinensis HOM05D005871 ORTHO05D003654 7.5e-07 58.9 227 29.1
Eucgr.L00169 Eucalyptus grandis HOM05D005871 ORTHO05D003654 1.7e-06 57.8 273 28.9
PSO675G2590 Papaver somniferum HOM05D063809 ORTHO05D003654 1.7e-06 57.8 255 34.9
Cfa000051 Carpinus fangiana HOM05D005871 ORTHO05D003654 2.2e-06 57.4 70 50.0
PGSC0003DMG400017373 Solanum tuberosum HOM05D016037 ORTHO05D003654 2.2e-06 57.4 120 35.8
Sed0014857 Sechium edule HOM05D005871 ORTHO05D003654 2.8e-06 57.0 256 30.5
FAN02G3820 Fragaria x ananassa HOM05D005871 ORTHO05D003654 3.7e-06 56.6 266 30.1
Solyc07g045530.2 Solanum lycopersicum HOM05D016037 ORTHO05D003654 3.7e-06 56.6 82 42.7
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 4.8e-06 56.2 250 30.0
Psat0s4683g0040 Pisum sativum HOM05D005871 ORTHO05D003654 6.3e-06 55.8 273 26.4
SGA_v2.0_scaffold73G24498 Striga asiatica HOM05D016037 ORTHO05D003654 6.3e-06 55.8 104 39.4
TWI38G1492 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 6.3e-06 55.8 263 31.9


User provided reference genes

Program Settings