Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022572 Daucus carota HOM05D008244 ORTHO05D009402 2.2e-285 984.9 496 100.0
DCAR_022571 Daucus carota HOM05D008244 ORTHO05D009402 2.2e-197 692.6 537 68.7
Hma1.2p1_0305F.1_g119380 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 3.4e-68 263.5 531 35.2
TWI14G1100 Tripterygium wilfordii HOM05D008244 ORTHO05D009402 4.6e-57 226.5 541 34.6
CANSAT64G2823 Cannabis sativa HOM05D008244 ORTHO05D009402 6.8e-45 186.0 561 30.3
Thecc.07G041100 Theobroma cacao HOM05D008244 ORTHO05D009402 6.0e-41 172.9 538 26.8
Thecc.07G062400 Theobroma cacao HOM05D008244 ORTHO05D009402 3.9e-40 170.2 529 27.4
Thecc.07G041300 Theobroma cacao HOM05D008244 ORTHO05D009402 4.7e-38 163.3 517 26.5
Thecc.07G062700 Theobroma cacao HOM05D008244 ORTHO05D009402 2.2e-35 154.5 533 27.0
Zm00001eb060190 Zea mays HOM05D008244 ORTHO05D009402 3.8e-35 153.7 518 27.6
EL10Ac4g07678 Beta vulgaris HOM05D008244 ORTHO05D009402 6.0e-33 146.4 532 27.6
TAR636G3080 Trochodendron aralioides HOM05D008244 ORTHO05D009402 6.0e-33 146.4 264 35.6
TAR633G2532 Trochodendron aralioides HOM05D008244 ORTHO05D009402 3.9e-32 143.7 270 40.0
TAR636G1541 Trochodendron aralioides HOM05D008244 ORTHO05D009402 8.7e-32 142.5 271 39.9
Sabra17G0026000 Salix brachista HOM05D008244 ORTHO05D009402 1.9e-31 141.4 376 31.6
Hma1.2p1_2166F.1_g315860 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 5.6e-31 139.8 488 28.3
TAR629G2654 Trochodendron aralioides HOM05D008244 ORTHO05D009402 7.3e-31 139.4 247 39.7
TAR636G0746 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.2e-30 138.7 269 37.5
TAR636G0515 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.8e-30 137.5 235 38.3
TAR636G1019 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.8e-30 137.5 265 36.2
AUR62020324 Chenopodium quinoa HOM05D008244 ORTHO05D009402 3.6e-30 137.1 529 26.8
Hma1.2p1_0642F.1_g194310 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 8.1e-30 136.0 359 32.6
Ah.04g166200 Amaranthus hybridus HOM05D008244 ORTHO05D009402 1.4e-29 135.2 261 36.4
TAR629G3474 Trochodendron aralioides HOM05D008244 ORTHO05D009402 4.0e-29 133.7 245 38.0
Thecc.07G041400 Theobroma cacao HOM05D008244 ORTHO05D009402 5.2e-29 133.3 233 35.2
TAR636G1283 Trochodendron aralioides HOM05D000739 ORTHO05D009402 5.2e-29 133.3 259 35.5
Thecc.07G040900 Theobroma cacao HOM05D008244 ORTHO05D009402 3.4e-28 130.6 233 34.8
TAR362G0980 Trochodendron aralioides HOM05D008244 ORTHO05D009402 8.4e-27 125.9 265 35.1
TAR636G0092 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.4e-26 125.2 208 38.9
TAR636G1905 Trochodendron aralioides HOM05D008244 ORTHO05D009402 3.5e-25 120.6 233 35.2
TAR636G1005 Trochodendron aralioides HOM05D008244 ORTHO05D009402 7.8e-25 119.4 249 36.5
TAR362G0489 Trochodendron aralioides HOM05D008244 ORTHO05D009402 3.9e-24 117.1 248 35.1
Potri.017G011000 Populus trichocarpa HOM05D008244 ORTHO05D009402 1.1e-23 115.5 386 29.5
TAR636G3091 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.9e-23 114.8 241 33.6
Hma1.2p1_0074F.1_g038655 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 9.6e-23 112.5 299 33.4
Hma1.2p1_1178F.1_g264420 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 1.4e-21 108.6 287 33.8
Hma1.2p1_0305F.1_g119700 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 5.8e-20 103.2 296 31.8
Hma1.2p1_0578F.1_g182370 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 5.8e-20 103.2 296 31.8
Hma1.2p1_0305F.1_g119690 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 1.3e-19 102.1 298 30.9
TAR636G3117 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.3e-19 102.1 228 32.9
TAR636G0857 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.1e-17 94.7 178 39.3
Zm00001eb092600 Zea mays HOM05D008244 ORTHO05D009402 1.3e-16 92.0 266 28.6
TAR381G0026 Trochodendron aralioides HOM05D008244 ORTHO05D009402 3.9e-16 90.5 227 32.6
TAR636G1851 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.9e-15 88.2 133 40.6
TAR636G2088 Trochodendron aralioides HOM05D008244 ORTHO05D009402 6.9e-13 79.7 139 36.0
Hma1.2p1_0305F.1_g119680 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 2.6e-12 77.8 160 35.6
TAR636G0384 Trochodendron aralioides HOM05D008244 ORTHO05D009402 9.9e-12 75.9 143 39.9
EL10Ac7g16017 Beta vulgaris HOM05D011280 ORTHO05D013414 1.3e-11 75.5 217 29.0
Ah.03g137140 Amaranthus hybridus HOM05D008244 ORTHO05D021209 2.9e-11 74.3 302 25.8
AUR62023833 Chenopodium quinoa HOM05D010230 ORTHO05D012432 6.4e-11 73.2 247 27.1
Ah.08g220090 Amaranthus hybridus HOM05D010230 ORTHO05D012432 3.5e-09 67.4 224 26.3
AUR62040154 Chenopodium quinoa HOM05D010230 ORTHO05D005845 6.0e-09 66.6 223 26.5
Os11g0164000 Oryza sativa ssp. japonica HOM05D031847 ORTHO05D023043 6.0e-09 66.6 276 25.4
Thecc.07G062500 Theobroma cacao HOM05D008244 ORTHO05D009402 6.0e-09 66.6 134 33.6
Zm00001eb089840 Zea mays HOM05D024869 ORTHO05D030402 8.7e-08 62.8 224 29.9
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 1.1e-07 62.4 196 29.6
Thecc.07G062600 Theobroma cacao HOM05D008244 ORTHO05D009402 1.1e-07 62.4 213 25.8
Gohir.D13G076700 Gossypium hirsutum HOM05D007873 ORTHO05D008474 1.5e-07 62.0 188 31.4
Ah.06g188270 Amaranthus hybridus HOM05D008244 ORTHO05D009402 1.9e-07 61.6 137 32.8
Duzib147G1609 Durio zibethinus HOM05D007873 ORTHO05D008474 1.9e-07 61.6 188 33.5
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 1.9e-07 61.6 196 31.1
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 3.3e-07 60.8 194 33.0
Gorai.013G087700 Gossypium raimondii HOM05D007873 ORTHO05D008474 3.3e-07 60.8 188 30.9
Zm00001eb091960 Zea mays HOM05D031847 ORTHO05D023043 3.3e-07 60.8 106 42.5
Duzib147G1581 Durio zibethinus HOM05D007873 ORTHO05D008474 4.3e-07 60.5 188 33.5
TAR636G0253 Trochodendron aralioides HOM05D008244 ORTHO05D009402 5.6e-07 60.1 101 39.6
EL10Ac5g12371 Beta vulgaris HOM05D008899 ORTHO05D009402 9.6e-07 59.3 112 35.7
Gohir.A13G077500 Gossypium hirsutum HOM05D007873 ORTHO05D008474 9.6e-07 59.3 188 30.3
AUR62014026 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.3e-06 58.9 121 34.7
AUR62014028 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.3e-06 58.9 121 34.7
AUR62014029 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.3e-06 58.9 121 34.7
AUR62014030 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.3e-06 58.9 121 34.7
AUR62014031 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.3e-06 58.9 121 34.7
AUR62014032 Chenopodium quinoa HOM05D008899 ORTHO05D009402 1.3e-06 58.9 121 34.7
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 1.3e-06 58.9 199 29.6
EL10Ac5g12367 Beta vulgaris HOM05D008899 ORTHO05D009402 2.1e-06 58.2 111 34.2
EL10Ac5g12368 Beta vulgaris HOM05D008899 ORTHO05D009402 2.1e-06 58.2 111 34.2
EL10Ac5g12372 Beta vulgaris HOM05D008899 ORTHO05D009402 2.1e-06 58.2 111 34.2
AUR62022102 Chenopodium quinoa HOM05D000025 ORTHO05D021209 2.1e-06 58.2 178 28.1
AUR62014027 Chenopodium quinoa HOM05D008899 ORTHO05D009402 2.8e-06 57.8 121 34.7
TAR636G2013 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.8e-06 57.8 99 37.4
TPR.G52 Trifolium pratense HOM05D010230 ORTHO05D012432 3.7e-06 57.4 214 26.6
EL10Ac5g12370 Beta vulgaris HOM05D008899 ORTHO05D009402 4.8e-06 57.0 95 37.9
Zm00001eb089860 Zea mays HOM05D024869 ORTHO05D030402 4.8e-06 57.0 132 33.3
EL10Ac5g12351 Beta vulgaris HOM05D008899 ORTHO05D009402 6.2e-06 56.6 110 37.3
EL10Ac5g12352 Beta vulgaris HOM05D008899 ORTHO05D009402 6.2e-06 56.6 110 37.3
EL10Ac5g12354 Beta vulgaris HOM05D008899 ORTHO05D009402 6.2e-06 56.6 110 37.3
Zm00001eb089980 Zea mays HOM05D024869 ORTHO05D030402 8.2e-06 56.2 109 34.9


User provided reference genes

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