Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022525 Daucus carota HOM05D002065 ORTHO05D002050 1.9e-116 422.5 219 100.0
DCAR_022526 Daucus carota HOM05D002065 ORTHO05D002050 4.6e-78 295.0 220 72.3
Cc05_g13270 Coffea canephora HOM05D002065 ORTHO05D002050 2.1e-22 110.2 196 37.2
TAR626G1743 Trochodendron aralioides HOM05D002065 ORTHO05D002050 1.0e-21 107.8 194 38.1
Actinidia35318 Actinidia chinensis HOM05D000018 ORTHO05D001766 4.0e-21 105.9 153 45.1
TAR626G0982 Trochodendron aralioides HOM05D002065 ORTHO05D002050 1.2e-20 104.4 199 35.2
DCAR_022527 Daucus carota HOM05D002065 ORTHO05D002050 8.3e-19 98.2 197 38.6
SGA_v2.0_scaffold27G11640 Striga asiatica HOM05D002065 ORTHO05D002050 1.1e-18 97.8 194 35.6
Hma1.2p1_1869F.1_g306050 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 1.4e-18 97.4 202 36.1
Oeu007631.2 Olea europaea HOM05D002065 ORTHO05D002050 2.4e-18 96.7 189 35.4
Migut.M01810 Erythranthe guttata HOM05D002065 ORTHO05D002050 4.1e-18 95.9 197 35.0
Oeu007632.1 Olea europaea HOM05D002065 ORTHO05D002050 4.1e-18 95.9 205 34.1
Lj8P166T75 Lonicera japonica HOM05D002065 ORTHO05D002050 5.4e-18 95.5 189 38.6
Dinv40711 Davidia involucrata HOM05D002065 ORTHO05D001766 2.7e-17 93.2 156 43.6
Lj8C77T5 Lonicera japonica HOM05D002065 ORTHO05D002050 3.5e-17 92.8 181 36.5
TAR629G2752 Trochodendron aralioides HOM05D002065 ORTHO05D002050 3.5e-17 92.8 201 34.3
Oeu025507.1 Olea europaea HOM05D002065 ORTHO05D002050 4.5e-17 92.4 154 39.0
Oeu025506.1 Olea europaea HOM05D002065 ORTHO05D002050 1.0e-16 91.3 154 38.3
Oeu025495.1 Olea europaea HOM05D002065 ORTHO05D002050 1.3e-16 90.9 153 37.9
Manes.15G076400 Manihot esculenta HOM05D002065 ORTHO05D002050 2.9e-16 89.7 203 31.5
Actinidia09932 Actinidia chinensis HOM05D002065 ORTHO05D002050 3.8e-16 89.4 181 40.3
Nitab4.5_0000092g0090 Nicotiana tabacum HOM05D002065 ORTHO05D002050 3.8e-16 89.4 170 32.4
MELO3C018104.2 Cucumis melo HOM05D002065 ORTHO05D002050 5.0e-16 89.0 174 31.0
Oeu025490.1 Olea europaea HOM05D002065 ORTHO05D002050 8.5e-16 88.2 153 37.3
MBI18_g44237_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 1.1e-15 87.8 208 33.2
MSTRG.14416 Avicennia marina HOM05D002065 ORTHO05D002050 1.5e-15 87.4 207 31.9
Nn1g03652 Nelumbo nucifera HOM05D002065 ORTHO05D002050 1.5e-15 87.4 179 35.2
Hma1.2p1_1564F.1_g290830 Hydrangea macrophylla HOM05D002065 ORTHO05D002050 1.9e-15 87.0 182 34.1
PSO017G0621 Papaver somniferum HOM05D002065 ORTHO05D002050 2.5e-15 86.7 202 32.7
RhsimUnG0253100 Rhododendron simsii HOM05D002065 ORTHO05D002050 2.5e-15 86.7 220 34.5
TWI39G0180 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 3.2e-15 86.3 180 33.9
SalBow8G3023 Salvia bowleyana HOM05D002065 ORTHO05D002050 7.2e-15 85.1 195 33.3
DCAR_019579 Daucus carota HOM05D002065 ORTHO05D002050 9.5e-15 84.7 140 34.3
Dinv22303 Davidia involucrata HOM05D002065 ORTHO05D002050 9.5e-15 84.7 159 35.8
Manes.03G123200 Manihot esculenta HOM05D002065 ORTHO05D002050 9.5e-15 84.7 202 32.2
Oeu062613.1 Olea europaea HOM05D002065 ORTHO05D002050 1.2e-14 84.3 193 31.1
CiPaw.11G184100 Carya illinoinensis HOM05D002065 ORTHO05D002050 1.6e-14 84.0 202 36.6
QL08p013247 Quercus lobata HOM05D002065 ORTHO05D002050 1.6e-14 84.0 201 34.3
Sabra16G0283800 Salix brachista HOM05D002065 ORTHO05D002050 1.6e-14 84.0 177 32.2
Haze_09616 Corylus avellana HOM05D002065 ORTHO05D002050 2.1e-14 83.6 208 35.6
Sc01g0007380 Simmondsia chinensis HOM05D002065 ORTHO05D002050 2.8e-14 83.2 166 33.7
PGR083G2635 Punica granatum HOM05D002065 ORTHO05D002050 3.6e-14 82.8 207 29.0
ClCG05G014750 Citrullus lanatus HOM05D002065 ORTHO05D002050 6.1e-14 82.0 192 31.2
Migut.M00328 Erythranthe guttata HOM05D002065 ORTHO05D002050 6.1e-14 82.0 210 32.4
MBI18_g44238_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 8.0e-14 81.6 208 32.2
PSO541G3356 Papaver somniferum HOM05D002065 ORTHO05D002050 1.4e-13 80.9 204 31.9
DCAR_020515 Daucus carota HOM05D002065 ORTHO05D002050 1.8e-13 80.5 153 32.7
Migut.M00324 Erythranthe guttata HOM05D002065 ORTHO05D002050 1.8e-13 80.5 219 33.8
MBI18_g41997_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 1.8e-13 80.5 208 32.2
Cfa020412 Carpinus fangiana HOM05D002065 ORTHO05D002050 2.3e-13 80.1 201 35.3
DCAR_019578 Daucus carota HOM05D002065 ORTHO05D035029 3.0e-13 79.7 186 32.3
THA.LOC104817885 Tarenaya hassleriana HOM05D002065 ORTHO05D002050 3.0e-13 79.7 193 31.1
DCAR_019582 Daucus carota HOM05D002065 ORTHO05D002050 4.0e-13 79.3 164 31.1
Oeu042915.1 Olea europaea HOM05D002065 ORTHO05D002050 4.0e-13 79.3 136 33.1
Aqoxy4G02007 Aquilegia oxysepala HOM05D002065 ORTHO05D002050 5.2e-13 79.0 201 31.8
Duzib213G0394 Durio zibethinus HOM05D002065 ORTHO05D002050 5.2e-13 79.0 204 32.4
PSO675G1570 Papaver somniferum HOM05D002065 ORTHO05D002050 5.2e-13 79.0 204 30.9
DCAR_008380 Daucus carota HOM05D002065 ORTHO05D002050 6.8e-13 78.6 184 36.4
Lj8C77T4 Lonicera japonica HOM05D002065 ORTHO05D002050 6.8e-13 78.6 214 35.5
Sed0026241 Sechium edule HOM05D002065 ORTHO05D002050 6.8e-13 78.6 220 29.5
Cpa.g.c26548.3 Carica papaya HOM05D002065 ORTHO05D002050 8.8e-13 78.2 196 33.7
CsaV3_3G023120 Cucumis sativus L. HOM05D002065 ORTHO05D002050 8.8e-13 78.2 170 30.0
Migut.M00290 Erythranthe guttata HOM05D002065 ORTHO05D002050 8.8e-13 78.2 220 30.9
DCAR_020516 Daucus carota HOM05D002065 ORTHO05D002050 1.2e-12 77.8 192 30.7
TWI38G0302 Tripterygium wilfordii HOM05D002065 ORTHO05D002050 1.2e-12 77.8 171 32.2
Migut.M00291 Erythranthe guttata HOM05D002065 ORTHO05D002050 1.5e-12 77.4 197 33.0
Migut.M00312 Erythranthe guttata HOM05D002065 ORTHO05D002050 1.5e-12 77.4 173 32.4
DCAR_008381 Daucus carota HOM05D002065 ORTHO05D002050 2.6e-12 76.6 194 31.4
Sopen12g001210 Solanum pennellii HOM05D002065 ORTHO05D002050 3.4e-12 76.3 160 30.6
Gorai.013G163600 Gossypium raimondii HOM05D002065 ORTHO05D002050 4.4e-12 75.9 203 35.5
Sed0007986 Sechium edule HOM05D002065 ORTHO05D002050 4.4e-12 75.9 174 30.5
PSO541G2674 Papaver somniferum HOM05D002065 ORTHO05D002050 5.7e-12 75.5 195 28.7
Potri.011G133900 Populus trichocarpa HOM05D002065 ORTHO05D002050 5.7e-12 75.5 201 30.8
Ciclev10009510m.g Citrus clementina HOM05D002065 ORTHO05D002050 7.5e-12 75.1 181 30.9
COL.COLO4_09575 Corchorus olitorius HOM05D002065 ORTHO05D002050 9.8e-12 74.7 181 33.7
Potri.001G418000 Populus trichocarpa HOM05D002065 ORTHO05D002050 9.8e-12 74.7 183 32.8
Solyc12g005230.3 Solanum lycopersicum HOM05D001540 ORTHO05D001520 9.8e-12 74.7 194 28.4
Gorai.002G082700 Gossypium raimondii HOM05D002065 ORTHO05D002050 1.3e-11 74.3 203 30.0
RcHm_v2.0_Chr5g0037701 Rosa chinensis HOM05D002065 ORTHO05D002050 1.3e-11 74.3 204 29.4
DCAR_008383 Daucus carota HOM05D002065 ORTHO05D002050 1.7e-11 73.9 186 30.6
SalBow7G4713 Salvia bowleyana HOM05D002065 ORTHO05D002050 1.7e-11 73.9 183 32.2
Thecc.07G052100 Theobroma cacao HOM05D002065 ORTHO05D002050 1.7e-11 73.9 204 31.9
Migut.M00321 Erythranthe guttata HOM05D002065 ORTHO05D002050 2.8e-11 73.2 192 31.2
MD11G1225800 Malus domestica HOM05D002065 ORTHO05D002050 2.8e-11 73.2 209 28.7
CAN.G140.7 Capsicum annuum HOM05D002065 ORTHO05D002050 3.7e-11 72.8 167 27.5
Sabra11G0120300 Salix brachista HOM05D002065 ORTHO05D002050 3.7e-11 72.8 198 31.3
Atru.chr2.3214 Acer truncatum HOM05D002065 ORTHO05D002050 4.9e-11 72.4 186 29.6
CARHR096380 Cardamine hirsuta HOM05D002065 ORTHO05D002050 4.9e-11 72.4 204 31.9
FAN16G0462 Fragaria x ananassa HOM05D002065 ORTHO05D002050 4.9e-11 72.4 206 31.1
Gohir.D01G061300 Gossypium hirsutum HOM05D002065 ORTHO05D002050 4.9e-11 72.4 203 29.6
Lsat_1_v5_gn_3_1961 Lactuca sativa HOM05D059448 ORTHO05D035029 4.9e-11 72.4 162 36.4
PSO675G4979 Papaver somniferum HOM05D002065 ORTHO05D002050 6.3e-11 72.0 203 31.0
PSO675G5185 Papaver somniferum HOM05D002065 ORTHO05D002050 6.3e-11 72.0 137 35.0
PSO732G0449 Papaver somniferum HOM05D002065 ORTHO05D002050 8.3e-11 71.6 154 33.8
FAN21G3193 Fragaria x ananassa HOM05D002065 ORTHO05D002050 1.1e-10 71.2 206 30.6
PSO170G3882 Papaver somniferum HOM05D002065 ORTHO05D002050 1.1e-10 71.2 185 33.0
EL10Ac4g07955 Beta vulgaris HOM05D002065 ORTHO05D002050 1.4e-10 70.9 183 33.3
DCAR_008386 Daucus carota HOM05D002065 ORTHO05D002050 1.4e-10 70.9 194 32.0
PSO017G7112 Papaver somniferum HOM05D002065 ORTHO05D002050 1.4e-10 70.9 150 33.3
A01p34210 Brassica napus HOM05D002065 ORTHO05D002050 1.8e-10 70.5 205 27.3
BraA01t03521Z Brassica rapa HOM05D002065 ORTHO05D002050 1.8e-10 70.5 205 27.3
Cfa020411 Carpinus fangiana HOM05D002065 ORTHO05D002050 1.8e-10 70.5 223 30.0
Haze_09617 Corylus avellana HOM05D002065 ORTHO05D002050 1.8e-10 70.5 223 28.7
DCAR_008384 Daucus carota HOM05D002065 ORTHO05D002050 2.4e-10 70.1 203 29.6
MBI02_g10994_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 2.4e-10 70.1 182 34.1
BcaB04g20643 Brassica carinata HOM05D002065 ORTHO05D002050 4.1e-10 69.3 206 28.6
AUR62015648 Chenopodium quinoa HOM05D002065 ORTHO05D023830 4.1e-10 69.3 191 33.5
AUR62015650 Chenopodium quinoa HOM05D002065 ORTHO05D002050 4.1e-10 69.3 177 31.6
Duzib170G0757 Durio zibethinus HOM05D002065 ORTHO05D002050 4.1e-10 69.3 206 33.0
Gohir.A01G074800 Gossypium hirsutum HOM05D002065 ORTHO05D002050 4.1e-10 69.3 203 30.0
BolC1t04321H Brassica oleracea HOM05D002065 ORTHO05D002050 5.4e-10 68.9 206 28.2
PSO302G0041 Papaver somniferum HOM05D002065 ORTHO05D002050 5.4e-10 68.9 192 31.8
Peaxi162Scf01086g00113 Petunia axillaris HOM05D002065 ORTHO05D002050 5.4e-10 68.9 134 32.1
Psat7g161480 Pisum sativum HOM05D002065 ORTHO05D002050 5.4e-10 68.9 189 31.7
Medtr4g081200 Medicago truncatula HOM05D002065 ORTHO05D002050 7.0e-10 68.6 176 27.8
FvH4_3g21890 Fragaria vesca HOM05D002065 ORTHO05D002050 9.2e-10 68.2 206 29.6
FAN11G3928 Fragaria x ananassa HOM05D002065 ORTHO05D002050 9.2e-10 68.2 206 29.6
MD03G1211100 Malus domestica HOM05D002065 ORTHO05D002050 9.2e-10 68.2 183 31.1
SalBow7G3313 Salvia bowleyana HOM05D002065 ORTHO05D002050 9.2e-10 68.2 151 31.8
Nn1g07007 Nelumbo nucifera HOM05D002065 ORTHO05D002050 1.2e-09 67.8 205 26.8
AUR62020550 Chenopodium quinoa HOM05D002065 ORTHO05D002050 1.6e-09 67.4 211 29.9
PSO063G4351 Papaver somniferum HOM05D002065 ORTHO05D002050 1.6e-09 67.4 187 29.4
Peaxi162Scf00192g00005 Petunia axillaris HOM05D002065 ORTHO05D002050 1.6e-09 67.4 144 27.1
BcaC09g49003 Brassica carinata HOM05D002065 ORTHO05D002050 2.7e-09 66.6 206 27.7
AUR62020551 Chenopodium quinoa HOM05D002065 ORTHO05D002050 2.7e-09 66.6 192 32.3
MBI18_g44236_MAGBIO Magnolia biondii HOM05D002065 ORTHO05D002050 2.7e-09 66.6 208 29.3
AUR62015652 Chenopodium quinoa HOM05D002065 ORTHO05D002050 3.5e-09 66.2 207 30.9
BcaC01g03546 Brassica carinata HOM05D002065 ORTHO05D002050 4.5e-09 65.9 184 31.0
C03p51220 Brassica napus HOM05D002065 ORTHO05D002050 4.5e-09 65.9 184 31.0
BolC3t17412H Brassica oleracea HOM05D002065 ORTHO05D002050 4.5e-09 65.9 184 31.0
PSO210G3167 Papaver somniferum HOM05D002065 ORTHO05D002050 4.5e-09 65.9 185 27.6
TPR.G25922 Trifolium pratense HOM05D002065 ORTHO05D002050 4.5e-09 65.9 178 29.8
Lsat_1_v5_gn_5_5781 Lactuca sativa HOM05D002065 ORTHO05D002050 5.9e-09 65.5 195 31.3
BcaB04g19117 Brassica carinata HOM05D002065 ORTHO05D002050 7.8e-09 65.1 204 28.9
Duzib213G0251 Durio zibethinus HOM05D002065 ORTHO05D002050 7.8e-09 65.1 201 32.3
CAN.G140.6 Capsicum annuum HOM05D002065 ORTHO05D002050 1.0e-08 64.7 135 28.1
PGSC0003DMG400032231 Solanum tuberosum HOM05D002065 ORTHO05D002050 1.0e-08 64.7 167 25.7
BraA03t13337Z Brassica rapa HOM05D002065 ORTHO05D002050 1.3e-08 64.3 184 29.3
Migut.M00327 Erythranthe guttata HOM05D002065 ORTHO05D002050 1.3e-08 64.3 209 29.7
A03p41840 Brassica napus HOM05D002065 ORTHO05D002050 1.7e-08 63.9 202 28.2
MD03G1210900 Malus domestica HOM05D002065 ORTHO05D002050 1.7e-08 63.9 211 28.4
AT3G20600 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 2.3e-08 63.5 212 27.8
Migut.M00323 Erythranthe guttata HOM05D002065 ORTHO05D002050 2.3e-08 63.5 152 31.6
Eucgr.F00979 Eucalyptus grandis HOM05D002065 ORTHO05D002050 2.3e-08 63.5 162 29.6
Prupe.4G204400 Prunus persica HOM05D002065 ORTHO05D002050 2.3e-08 63.5 182 29.1
SalBow7G1217 Salvia bowleyana HOM05D002065 ORTHO05D002050 2.3e-08 63.5 156 34.0
AUR62020549 Chenopodium quinoa HOM05D002065 ORTHO05D002050 2.9e-08 63.2 208 30.8
Sp3g18610 Schrenkiella parvula HOM05D002065 ORTHO05D002050 2.9e-08 63.2 204 27.0
AL3G34460 Arabidopsis lyrata HOM05D002065 ORTHO05D002050 3.8e-08 62.8 212 26.9
Carub.0003s2057 Capsella rubella HOM05D002065 ORTHO05D002050 3.8e-08 62.8 211 29.4
Glyma.12G214100 Glycine max HOM05D002065 ORTHO05D002050 3.8e-08 62.8 219 28.8
Nitab4.5_0005041g0020 Nicotiana tabacum HOM05D002065 ORTHO05D002050 3.8e-08 62.8 151 28.5
COL.COLO4_31720 Corchorus olitorius HOM05D004864 ORTHO05D005393 5.0e-08 62.4 170 27.1
HanXRQChr17g0550391 Helianthus annuus HOM05D012725 ORTHO05D013597 6.6e-08 62.0 185 31.4
Lalb_Chr14g0366161 Lupinus albus HOM05D002065 ORTHO05D002050 6.6e-08 62.0 211 25.1
MD03G1211000 Malus domestica HOM05D002065 ORTHO05D002050 6.6e-08 62.0 186 30.1
PSO302G0191 Papaver somniferum HOM05D002065 ORTHO05D002050 6.6e-08 62.0 187 30.5
Sp3g18640 Schrenkiella parvula HOM05D002065 ORTHO05D002050 6.6e-08 62.0 223 28.3
Lsat_1_v5_gn_3_120800 Lactuca sativa HOM05D002065 ORTHO05D002050 8.6e-08 61.6 180 31.1
EL10Ac4g07956 Beta vulgaris HOM05D002065 ORTHO05D002050 1.1e-07 61.2 201 28.4
Sp3g18650 Schrenkiella parvula HOM05D002065 ORTHO05D002050 1.1e-07 61.2 177 27.7
TAR629G2849 Trochodendron aralioides HOM05D002065 ORTHO05D002050 1.1e-07 61.2 189 27.0
Thhalv10021500m.g Eutrema salsugineum HOM05D002065 ORTHO05D002050 1.5e-07 60.8 209 28.2
Solyc01g006320.4 Solanum lycopersicum HOM05D002065 ORTHO05D002050 1.5e-07 60.8 179 26.8
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 1.9e-07 60.5 202 30.2
AUR62020552 Chenopodium quinoa HOM05D002065 ORTHO05D002050 2.5e-07 60.1 159 30.2
BraA05t21707Z Brassica rapa HOM05D002065 ORTHO05D002050 3.3e-07 59.7 202 29.7
Lsat_1_v5_gn_3_1981 Lactuca sativa HOM05D002065 ORTHO05D002050 3.3e-07 59.7 216 29.6
AT3G20610 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 4.3e-07 59.3 211 26.5
EL10Ac4g07957 Beta vulgaris HOM05D002065 ORTHO05D002050 4.3e-07 59.3 224 29.0
BcaC05g28309 Brassica carinata HOM05D002065 ORTHO05D002050 4.3e-07 59.3 202 29.2
C05p43700 Brassica napus HOM05D002065 ORTHO05D002050 4.3e-07 59.3 202 29.2
PSO500G0109 Papaver somniferum HOM05D002065 ORTHO05D002050 5.6e-07 58.9 160 31.2
PSO675G3057 Papaver somniferum HOM05D002065 ORTHO05D002050 5.6e-07 58.9 153 31.4
PSO675G5485 Papaver somniferum HOM05D002065 ORTHO05D002050 5.6e-07 58.9 190 31.1
AT3G20590 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 7.3e-07 58.5 168 29.2
Glyma.13G287500 Glycine max HOM05D002065 ORTHO05D002050 1.2e-06 57.8 193 28.0
CARHR096390 Cardamine hirsuta HOM05D002065 ORTHO05D002050 1.6e-06 57.4 211 26.5
PSO675G5832 Papaver somniferum HOM05D002065 ORTHO05D002050 2.1e-06 57.0 186 29.0
PSO675G3505 Papaver somniferum HOM05D002065 ORTHO05D002050 3.6e-06 56.2 196 24.5
BcaB06g26126 Brassica carinata HOM05D002065 ORTHO05D002050 4.7e-06 55.8 178 29.8
PGSC0003DMG400025621 Solanum tuberosum HOM05D002065 ORTHO05D002050 4.7e-06 55.8 100 30.0
Aa31LG8G7410 Aethionema arabicum HOM05D002065 ORTHO05D002050 6.1e-06 55.5 182 29.7
Gorai.011G017400 Gossypium raimondii HOM05D002065 ORTHO05D002050 6.1e-06 55.5 186 24.7
Medtr7g109260 Medicago truncatula HOM05D002065 ORTHO05D002050 8.0e-06 55.1 139 25.2
PSO675G4306 Papaver somniferum HOM05D002065 ORTHO05D002050 8.0e-06 55.1 148 29.7
PGSC0003DMG400032148 Solanum tuberosum HOM05D002065 ORTHO05D002050 8.0e-06 55.1 97 26.8


User provided reference genes

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