Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 1.3e-163 579.7 293 100.0
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 8.7e-141 503.8 293 86.3
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 7.9e-126 454.1 295 78.0
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 1.5e-124 449.9 295 77.3
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.3e-123 446.8 295 76.3
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 5.3e-122 441.4 297 75.1
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 5.0e-120 434.9 297 74.4
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 1.1e-119 433.7 297 75.1
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 4.7e-118 428.3 295 74.2
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 8.0e-118 427.6 290 73.8
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 5.2e-117 424.9 294 73.8
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 3.3e-116 422.2 284 75.4
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 7.4e-116 421.0 295 72.5
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.7e-115 419.9 290 72.4
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 2.2e-115 419.5 296 72.0
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 2.2e-115 419.5 290 72.8
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.1e-114 417.2 282 74.8
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 9.1e-114 414.1 290 71.4
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 1.6e-113 413.3 289 71.6
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 4.5e-113 411.8 294 71.4
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 7.7e-113 411.0 294 70.4
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 3.8e-112 408.7 292 71.6
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 5.0e-112 408.3 292 71.6
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 8.5e-112 407.5 293 72.0
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 1.9e-111 406.4 295 70.5
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 1.2e-110 403.7 295 71.5
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 1.6e-110 403.3 297 69.0
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 2.1e-110 402.9 295 71.2
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 3.6e-110 402.1 294 68.7
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 3.6e-110 402.1 294 68.7
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 4.7e-110 401.7 301 69.8
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 6.1e-110 401.4 295 70.8
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.4e-109 400.2 285 70.2
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 2.3e-109 399.4 289 68.5
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 3.0e-109 399.1 294 69.7
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 6.7e-109 397.9 285 70.5
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 8.8e-109 397.5 289 68.2
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 1.2e-108 397.1 301 67.1
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 1.2e-108 397.1 300 69.0
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.2e-108 397.1 288 70.1
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.5e-108 396.7 288 70.1
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 1.5e-108 396.7 294 68.7
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 2.0e-108 396.4 289 70.2
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.0e-108 396.4 289 68.9
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.0e-108 396.4 289 68.2
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 2.0e-108 396.4 289 68.9
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 2.6e-108 396.0 288 69.8
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 3.3e-108 395.6 284 70.4
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 4.4e-108 395.2 289 68.2
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 4.4e-108 395.2 289 68.5
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 4.4e-108 395.2 288 69.8
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 4.4e-108 395.2 298 68.1
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 4.4e-108 395.2 292 68.8
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 7.5e-108 394.4 291 68.7
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 9.7e-108 394.0 288 69.8
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 1.3e-107 393.7 283 70.3
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 1.3e-107 393.7 292 67.8
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.7e-107 393.3 289 68.5
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 1.7e-107 393.3 294 68.0
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 2.2e-107 392.9 289 68.2
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 2.2e-107 392.9 291 69.1
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 2.8e-107 392.5 284 69.7
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 2.8e-107 392.5 288 69.4
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 3.7e-107 392.1 290 69.3
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 4.8e-107 391.7 288 69.4
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 4.8e-107 391.7 293 69.6
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 4.8e-107 391.7 289 67.1
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 6.3e-107 391.3 291 69.4
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 6.3e-107 391.3 291 69.4
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 6.3e-107 391.3 279 72.8
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.1e-106 390.6 290 69.7
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 1.1e-106 390.6 287 68.3
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 1.4e-106 390.2 301 66.4
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 1.4e-106 390.2 282 69.5
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.4e-106 390.2 292 69.5
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 1.4e-106 390.2 292 69.5
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 2.4e-106 389.4 291 68.4
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 2.4e-106 389.4 291 67.7
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 3.1e-106 389.0 291 68.7
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 3.1e-106 389.0 289 70.2
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 3.1e-106 389.0 290 69.0
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 3.1e-106 389.0 300 65.3
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 3.1e-106 389.0 291 69.4
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 4.1e-106 388.7 289 70.2
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 4.1e-106 388.7 295 69.5
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 4.1e-106 388.7 283 68.9
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 4.1e-106 388.7 289 70.2
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 5.3e-106 388.3 289 69.6
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 7.0e-106 387.9 291 68.0
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 9.1e-106 387.5 290 67.9
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 9.1e-106 387.5 284 68.7
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.2e-105 387.1 289 69.9
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 1.2e-105 387.1 289 69.9
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 1.2e-105 387.1 289 69.9
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 1.6e-105 386.7 292 68.5
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 1.6e-105 386.7 290 68.6
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 1.6e-105 386.7 288 69.1
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 2.0e-105 386.3 289 69.9
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 2.7e-105 386.0 289 69.9
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 2.7e-105 386.0 289 69.6
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 3.5e-105 385.6 289 68.9
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 3.5e-105 385.6 289 68.9
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 3.5e-105 385.6 289 68.9
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 3.5e-105 385.6 290 68.3
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 4.5e-105 385.2 289 69.2
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 5.9e-105 384.8 301 66.1
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 1.3e-104 383.6 283 67.5
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 1.7e-104 383.3 292 67.5
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 2.2e-104 382.9 289 68.9
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 2.9e-104 382.5 292 67.1
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 2.9e-104 382.5 292 67.1
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 2.9e-104 382.5 290 69.0
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 1.1e-103 380.6 295 67.1
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 4.2e-103 378.6 292 66.8
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 5.5e-103 378.3 283 66.1
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 7.2e-103 377.9 287 66.9
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 1.6e-102 376.7 283 70.0
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 2.7e-102 375.9 283 69.6
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 8.0e-102 374.4 292 66.8
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 8.0e-102 374.4 282 68.8
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 2.3e-101 372.9 283 69.3
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 2.0e-100 369.8 298 66.8
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 2.2e-99 366.3 297 65.3
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 4.8e-99 365.2 280 66.4
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 4.8e-99 365.2 293 60.8
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 8.3e-99 364.4 289 65.4
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 9.1e-98 360.9 286 67.5
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 2.0e-97 359.8 285 67.4
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 3.5e-97 359.0 291 65.3
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 4.5e-97 358.6 285 66.3
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 1.9e-95 353.2 296 63.5
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 1.9e-95 353.2 295 63.7
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.9e-95 353.2 295 64.4
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 2.1e-94 349.7 294 61.6
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 6.1e-94 348.2 295 62.7
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 1.8e-93 346.7 282 62.1
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 5.2e-93 345.1 304 60.2
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 4.4e-92 342.0 303 61.1
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 1.8e-90 336.7 303 60.1
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 7.0e-90 334.7 307 58.3
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.0e-88 330.9 244 68.0
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 6.4e-83 311.6 293 59.0
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 4.1e-82 308.9 261 60.9
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 9.2e-82 307.8 297 57.2
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 6.4e-75 285.0 191 73.3
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 4.1e-74 282.3 279 54.5
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 6.8e-69 265.0 235 62.1
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 1.7e-64 250.4 278 50.0
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 9.5e-63 244.6 271 48.7
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 8.4e-59 231.5 275 45.5
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 1.4e-58 230.7 276 48.6
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 3.6e-54 216.1 162 66.7
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 1.5e-52 210.7 136 73.5
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 1.7e-51 207.2 264 46.6
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 3.2e-50 203.0 131 73.3
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 4.9e-43 179.1 152 60.5
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 6.4e-43 178.7 142 66.2
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 8.7e-24 115.2 333 29.1
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 5.7e-23 112.5 109 56.0
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 8.2e-22 108.6 87 62.1
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 4.1e-21 106.3 109 54.1
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 1.2e-20 104.8 103 53.4
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 5.9e-20 102.4 98 57.1
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 9.7e-15 85.1 71 60.6
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 3.6e-09 66.6 72 50.0
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 3.9e-08 63.2 90 44.4
Peaxi162Scf00057g02525 Petunia axillaris HOM05D005748 ORTHO05D007123 7.4e-07 58.9 152 32.9
SHI26932 Sapria himalayana HOM05D009124 ORTHO05D012381 1.3e-06 58.2 68 45.6
CsaV3_2G024810 Cucumis sativus L. HOM05D005748 ORTHO05D007123 3.7e-06 56.6 120 34.2
Nitab4.5_0003520g0030 Nicotiana tabacum HOM05D005748 ORTHO05D007123 3.7e-06 56.6 152 32.9
PGSC0003DMG400020380 Solanum tuberosum HOM05D005748 ORTHO05D007123 6.3e-06 55.8 152 32.2
TWI18G0424 Tripterygium wilfordii HOM05D005748 ORTHO05D007123 6.3e-06 55.8 152 31.6


User provided reference genes

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